Literature DB >> 21821045

Aggregation kinetics of interrupted polyglutamine peptides.

Robert H Walters1, Regina M Murphy.   

Abstract

Abnormally expanded polyglutamine domains are associated with at least nine neurodegenerative diseases, including Huntington's disease. Expansion of the glutamine region facilitates aggregation of the impacted protein, and aggregation has been linked to neurotoxicity. Studies of synthetic peptides have contributed substantially to our understanding of the mechanism of aggregation because the underlying biophysics of polyglutamine-mediated association can be probed independent of their context within a larger protein. In this report, interrupting residues were inserted into polyglutamine peptides (Q20), and the impact on conformational and aggregation properties was examined. A peptide with two alanine residues formed laterally aligned fibrillar aggregates that were similar to the uninterrupted Q20 peptide. Insertion of two proline residues resulted in soluble, nonfibrillar aggregates, which did not mature into insoluble aggregates. In contrast, insertion of a β-turn template (D)PG rapidly accelerated aggregation and resulted in a fibrillar aggregate morphology with little lateral alignment between fibrils. These results are interpreted to indicate that (a) long-range nonspecific interactions lead to the formation of soluble oligomers, while maturation of oligomers into fibrils requires conformational conversion and (b) that soluble oligomers dynamically interact with each other, while insoluble aggregates are relatively inert. Kinetic analysis revealed that the increase in aggregation caused by the (D)PG insert is inconsistent with the nucleation-elongation mechanism of aggregation featuring a monomeric β-sheet nucleus. Rather, the data support a mechanism of polyglutamine aggregation by which monomers associate into soluble oligomers, which then undergo slow structural rearrangement to form sedimentable aggregates.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21821045      PMCID: PMC3170924          DOI: 10.1016/j.jmb.2011.07.003

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  49 in total

1.  Identification of anti-prion compounds as efficient inhibitors of polyglutamine protein aggregation in a zebrafish model.

Authors:  Niclas W Schiffer; Sarah A Broadley; Thomas Hirschberger; Paul Tavan; Hans A Kretzschmar; Armin Giese; Christian Haass; F Ulrich Hartl; Bettina Schmid
Journal:  J Biol Chem       Date:  2006-12-14       Impact factor: 5.157

2.  Polyglutamine aggregation behavior in vitro supports a recruitment mechanism of cytotoxicity.

Authors:  S Chen; V Berthelier; W Yang; R Wetzel
Journal:  J Mol Biol       Date:  2001-08-03       Impact factor: 5.469

3.  Polyglutamine length-dependent interaction of Hsp40 and Hsp70 family chaperones with truncated N-terminal huntingtin: their role in suppression of aggregation and cellular toxicity.

Authors:  N R Jana; M Tanaka; G h Wang; N Nukina
Journal:  Hum Mol Genet       Date:  2000-08-12       Impact factor: 6.150

4.  Critical nucleus size for disease-related polyglutamine aggregation is repeat-length dependent.

Authors:  Karunakar Kar; Murali Jayaraman; Bankanidhi Sahoo; Ravindra Kodali; Ronald Wetzel
Journal:  Nat Struct Mol Biol       Date:  2011-02-13       Impact factor: 15.369

5.  Fluorescence correlation spectroscopy shows that monomeric polyglutamine molecules form collapsed structures in aqueous solutions.

Authors:  Scott L Crick; Murali Jayaraman; Carl Frieden; Ronald Wetzel; Rohit V Pappu
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-30       Impact factor: 11.205

6.  Structural and functional analysis of ataxin-2 and ataxin-3.

Authors:  Mario Albrecht; Michael Golatta; Ullrich Wüllner; Thomas Lengauer
Journal:  Eur J Biochem       Date:  2004-08

7.  Mechanism of cis-inhibition of polyQ fibrillation by polyP: PPII oligomers and the hydrophobic effect.

Authors:  Gregory D Darnell; JohnMark Derryberry; Josh W Kurutz; Stephen C Meredith
Journal:  Biophys J       Date:  2009-10-21       Impact factor: 4.033

Review 8.  Polyglutamine neurodegeneration: protein misfolding revisited.

Authors:  Aislinn J Williams; Henry L Paulson
Journal:  Trends Neurosci       Date:  2008-09-06       Impact factor: 13.837

9.  Aggregated polyglutamine peptides delivered to nuclei are toxic to mammalian cells.

Authors:  Wen Yang; John R Dunlap; Richard B Andrews; Ronald Wetzel
Journal:  Hum Mol Genet       Date:  2002-11-01       Impact factor: 6.150

10.  Pathogenic and non-pathogenic polyglutamine tracts have similar structural properties: towards a length-dependent toxicity gradient.

Authors:  Fabrice A C Klein; Annalisa Pastore; Laura Masino; Gabrielle Zeder-Lutz; Hélène Nierengarten; Mustapha Oulad-Abdelghani; Danièle Altschuh; Jean-Louis Mandel; Yvon Trottier
Journal:  J Mol Biol       Date:  2007-05-18       Impact factor: 5.469

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  15 in total

Review 1.  Physical chemistry of polyglutamine: intriguing tales of a monotonous sequence.

Authors:  Ronald Wetzel
Journal:  J Mol Biol       Date:  2012-01-27       Impact factor: 5.469

2.  The Aggregation Free Energy Landscapes of Polyglutamine Repeats.

Authors:  Mingchen Chen; MinYeh Tsai; Weihua Zheng; Peter G Wolynes
Journal:  J Am Chem Soc       Date:  2016-11-10       Impact factor: 15.419

Review 3.  PolyQ disease: misfiring of a developmental cell death program?

Authors:  Elyse S Blum; Andrew R Schwendeman; Shai Shaham
Journal:  Trends Cell Biol       Date:  2012-12-08       Impact factor: 20.808

4.  Backbone Engineering within a Latent β-Hairpin Structure to Design Inhibitors of Polyglutamine Amyloid Formation.

Authors:  Karunakar Kar; Matthew A Baker; George A Lengyel; Cody L Hoop; Ravindra Kodali; In-Ja Byeon; W Seth Horne; Patrick C A van der Wel; Ronald Wetzel
Journal:  J Mol Biol       Date:  2016-12-13       Impact factor: 5.469

Review 5.  The emerging role of the first 17 amino acids of huntingtin in Huntington's disease.

Authors:  James R Arndt; Maxmore Chaibva; Justin Legleiter
Journal:  Biomol Concepts       Date:  2015-03

6.  CAMELOT: A machine learning approach for coarse-grained simulations of aggregation of block-copolymeric protein sequences.

Authors:  Kiersten M Ruff; Tyler S Harmon; Rohit V Pappu
Journal:  J Chem Phys       Date:  2015-12-28       Impact factor: 3.488

7.  Elongation kinetics of polyglutamine peptide fibrils: a quartz crystal microbalance with dissipation study.

Authors:  Robert H Walters; Kurt H Jacobson; Joel A Pedersen; Regina M Murphy
Journal:  J Mol Biol       Date:  2012-03-26       Impact factor: 5.469

Review 8.  Fibrillogenesis of huntingtin and other glutamine containing proteins.

Authors:  Yuri L Lyubchenko; Alexey V Krasnoslobodtsev; Sorin Luca
Journal:  Subcell Biochem       Date:  2012

9.  TANGO-Inspired Design of Anti-Amyloid Cyclic Peptides.

Authors:  Xiaomeng Lu; Claire R Brickson; Regina M Murphy
Journal:  ACS Chem Neurosci       Date:  2016-07-11       Impact factor: 4.418

10.  β-hairpin-mediated nucleation of polyglutamine amyloid formation.

Authors:  Karunakar Kar; Cody L Hoop; Kenneth W Drombosky; Matthew A Baker; Ravindra Kodali; Irene Arduini; Patrick C A van der Wel; W Seth Horne; Ronald Wetzel
Journal:  J Mol Biol       Date:  2013-01-23       Impact factor: 5.469

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