Literature DB >> 21805302

Application of direct PCR in a forensic case of yew poisoning.

Christian Gausterer1, Christina Stein, Thomas Stimpfl.   

Abstract

Intoxications with yew (Taxus spp.) pose a challenge to forensic toxicology because a variety of Taxus ingredients have been associated with its toxic effects. To provide preliminary evidence in cases where plant material is available, we introduce a novel direct PCR assay for the detection of DNA traces from Taxus spp. This assay has been successfully applied to a forensic case of suicidal poisoning via ingestion of Taxus leaves. PCR primers were designed to target a sequence located in the internal transcribed spacer 1 (ITS1) of nuclear ribosomal DNA, which is well conserved among species of the genus Taxus and can, therefore, be exploited to discriminate between Taxus and other conifers. Because ITS1 exists as a multicopy sequence within the plant genome, the assay provides enough sensitivity to work with trace amounts that are below the DNA content of a single cell. Specificity of the assay was tested with DNA extracts from Taxaceae and selected representatives from other related plant families (Cephalotaxaceae, Cupressaceae and Pinaceae). When combined with the commercial Phire® Plant Direct PCR Kit (Finnzymes), the primers allowed application of a two-step cycling protocol (without the annealing step), and because direct PCR requires only little sample pre-treatment, results from PCR could be obtained within 1.5 h after analysis had begun. Direct PCR was performed with diluted gastric content from the forensic case. Amplification products of the expected size were purified and sequenced. Sequence data were subjected to Basic Local Alignment Search Tool analysis and affiliated with ITS1 from Taxus spp.

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Year:  2011        PMID: 21805302     DOI: 10.1007/s00414-011-0607-0

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  19 in total

Review 1.  Ribosomal ITS sequences and plant phylogenetic inference.

Authors:  I Alvarez; J F Wendel
Journal:  Mol Phylogenet Evol       Date:  2003-12       Impact factor: 4.286

2.  Identification of poisonous plants by DNA barcoding approach.

Authors:  Ilaria Bruni; Fabrizio De Mattia; Andrea Galimberti; Gabriele Galasso; Enrico Banfi; Maurizio Casiraghi; Massimo Labra
Journal:  Int J Legal Med       Date:  2010-03-31       Impact factor: 2.686

3.  Quantitative determination of taxine B in body fluids by LC-MS-MS.

Authors:  L Frommherz; P Kintz; H Kijewski; H Köhler; M Lehr; B Brinkmann; J Beike
Journal:  Int J Legal Med       Date:  2006-01-06       Impact factor: 2.686

4.  Screening of the needles of different yew species and cultivars for paclitaxel and related taxoids.

Authors:  E L van Rozendaal; G P Lelyveld; T A van Beek
Journal:  Phytochemistry       Date:  2000-02       Impact factor: 4.072

5.  Forensic botany: species identification of botanical trace evidence using a multigene barcoding approach.

Authors:  Gianmarco Ferri; Milena Alù; Beatrice Corradini; Giovanni Beduschi
Journal:  Int J Legal Med       Date:  2009-06-07       Impact factor: 2.686

6.  DNA barcoding for the discrimination of Eurasian yews (Taxus L., Taxaceae) and the discovery of cryptic species.

Authors:  Jie Liu; Michael Möller; Lian-Ming Gao; De-Quan Zhang; De-Zhu Li
Journal:  Mol Ecol Resour       Date:  2010-08-16       Impact factor: 7.090

7.  A comparative study of five fatal cases of Taxus poisoning.

Authors:  J Pietsch; K Schulz; U Schmidt; H Andresen; B Schwarze; J Dressler
Journal:  Int J Legal Med       Date:  2006-05-06       Impact factor: 2.686

8.  Predicting DNA duplex stability from the base sequence.

Authors:  K J Breslauer; R Frank; H Blöcker; L A Marky
Journal:  Proc Natl Acad Sci U S A       Date:  1986-06       Impact factor: 11.205

9.  A set of universal primers for amplification of polymorphic non-coding regions of mitochondrial and chloroplast DNA in plants.

Authors:  B Demesure; N Sodzi; R J Petit
Journal:  Mol Ecol       Date:  1995-02       Impact factor: 6.185

10.  [Suicidal yew poisoning--from Caesar to today--or suicide instructions on the internet].

Authors:  Frank Wehner; Oliver Gawatz
Journal:  Arch Kriminol       Date:  2003 Jan-Feb
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  4 in total

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Authors:  Renée Ottens; Duncan Taylor; Adrian Linacre
Journal:  Forensic Sci Med Pathol       Date:  2014-11-13       Impact factor: 2.007

2.  A proof of principal study on the use of direct PCR of semen and spermatozoa and development of a differential isolation protocol for use in cases of alleged sexual assault.

Authors:  Shanan S Tobe; Yuvaneswari C Swaran; Lynn Dennany; Ursula Sibbing; Kristina Schulze Johann; Lindsey Welch; Marielle Vennemann
Journal:  Int J Legal Med       Date:  2016-11-10       Impact factor: 2.686

3.  Successful direct amplification of nuclear markers from a single hair follicle.

Authors:  Renée Ottens; Duncan Taylor; Damien Abarno; Adrian Linacre
Journal:  Forensic Sci Med Pathol       Date:  2012-12-30       Impact factor: 2.007

4.  Rapid and Visual Identification of Chlorophyllum molybdites With Loop-Mediated Isothermal Amplification Method.

Authors:  Nan Wang; Zhiyong Zhao; Jie Gao; Enjing Tian; Wenjie Yu; Hui Li; Juan Zhang; Ruibin Xie; Xiaoyan Zhao; Ailiang Chen
Journal:  Front Microbiol       Date:  2021-03-18       Impact factor: 5.640

  4 in total

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