Literature DB >> 21799482

Common genetic variants and central adiposity among Asian-Indians.

Steven C Moore1, Marc J Gunter, Carrie R Daniel, K Srinath Reddy, Preeti S George, Susan Yurgalevitch, Niveditha Devasenapathy, Lakshmy Ramakrishnan, Nilanjan Chatterjee, Stephen J Chanock, Sonja I Berndt, Aleyamma Mathew, Dorairaj Prabhakaran, Rashmi Sinha.   

Abstract

Recent studies have identified common genetic variants that are unequivocally associated with central adiposity, BMI, and/or fasting plasma glucose among individuals of European descent. Our objective was to evaluate these associations in a population of Asian-Indians. We examined 16 single-nucleotide polymorphisms (SNPs) from loci previously linked to waist circumference, BMI, or fasting glucose in 1,129 Asian-Indians from New Delhi and Trivandrum. Trained medical staff measured waist circumference, height, and weight. Fasting plasma glucose was measured from collected blood specimens. Genotype-phenotype associations were evaluated using linear regression, with adjustments for age, gender, religion, and study region. For gene-environment interaction tests, total physical activity (PA) during the past 7 days was assessed by the International Physical Activity Questionnaire (IPAQ). The T allele at the FTO rs3751812 locus was associated with increased waist circumference (per allele effect of +1.58 cm, P(trend) = 0.0015) after Bonferroni adjustment for multiple testing (P(adj) = 0.04). We also found a nominally statistically significant FTO-PA interaction (P(interaction) = 0.008). Among participants with <81 metabolic equivalent (MET)-h/wk of PA, the rs3751812 variant was associated with increased waist size (+2.68 cm; 95% confidence interval (CI) = 1.24, 4.12), but not among those with 212+ MET-h/wk (-1.79 cm; 95% CI = -4.17, 0.58). No other variant had statistically significant associations, although statistical power was modest. In conclusion, we confirmed that an FTO variant associated with central adiposity in European populations is associated with central adiposity among Asian-Indians and corroborated prior reports indicating that high PA attenuates FTO-related genetic susceptibility to adiposity.

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Year:  2011        PMID: 21799482      PMCID: PMC3429696          DOI: 10.1038/oby.2011.238

Source DB:  PubMed          Journal:  Obesity (Silver Spring)        ISSN: 1930-7381            Impact factor:   5.002


  40 in total

1.  Replication of the association of common rs9939609 variant of FTO with increased BMI in an Australian adult twin population but no evidence for gene by environment (G x E) interaction.

Authors:  B K Cornes; P A Lind; S E Medland; G W Montgomery; D R Nyholt; N G Martin
Journal:  Int J Obes (Lond)       Date:  2008-11-25       Impact factor: 5.095

2.  An obesity-associated FTO gene variant and increased energy intake in children.

Authors:  Joanne E Cecil; Roger Tavendale; Peter Watt; Marion M Hetherington; Colin N A Palmer
Journal:  N Engl J Med       Date:  2008-12-11       Impact factor: 91.245

3.  The common variant in the FTO gene did not modify the effect of lifestyle changes on body weight: the Finnish Diabetes Prevention Study.

Authors:  Tiina J Lappalainen; Anna-Maija Tolppanen; Marjukka Kolehmainen; Ursula Schwab; Jaana Lindström; Jaakko Tuomilehto; Leena Pulkkinen; Johan G Eriksson; Markku Laakso; Helena Gylling; Matti Uusitupa
Journal:  Obesity (Silver Spring)       Date:  2009-01-29       Impact factor: 5.002

4.  Assessing gene-treatment interactions at the FTO and INSIG2 loci on obesity-related traits in the Diabetes Prevention Program.

Authors:  P W Franks; K A Jablonski; L M Delahanty; J B McAteer; S E Kahn; W C Knowler; J C Florez
Journal:  Diabetologia       Date:  2008-10-07       Impact factor: 10.122

5.  Physical activity and the association of common FTO gene variants with body mass index and obesity.

Authors:  Evadnie Rampersaud; Braxton D Mitchell; Toni I Pollin; Mao Fu; Haiqing Shen; Jeffery R O'Connell; Julie L Ducharme; Scott Hines; Paul Sack; Rosalie Naglieri; Alan R Shuldiner; Soren Snitker
Journal:  Arch Intern Med       Date:  2008-09-08

6.  FTO gene variants are strongly associated with type 2 diabetes in South Asian Indians.

Authors:  C S Yajnik; C S Janipalli; S Bhaskar; S R Kulkarni; R M Freathy; S Prakash; K R Mani; M N Weedon; S D Kale; J Deshpande; G V Krishnaveni; S R Veena; C H D Fall; M I McCarthy; T M Frayling; A T Hattersley; G R Chandak
Journal:  Diabetologia       Date:  2008-11-13       Impact factor: 10.122

7.  Implication of genetic variants near TCF7L2, SLC30A8, HHEX, CDKAL1, CDKN2A/B, IGF2BP2, and FTO in type 2 diabetes and obesity in 6,719 Asians.

Authors:  Maggie C Y Ng; Kyong Soo Park; Bermseok Oh; Claudia H T Tam; Young Min Cho; Hyoung Doo Shin; Vincent K L Lam; Ronald C W Ma; Wing Yee So; Yoon Shin Cho; Hyung-Lae Kim; Hong Kyu Lee; Juliana C N Chan; Nam H Cho
Journal:  Diabetes       Date:  2008-05-09       Impact factor: 9.461

8.  Impact of nine common type 2 diabetes risk polymorphisms in Asian Indian Sikhs: PPARG2 (Pro12Ala), IGF2BP2, TCF7L2 and FTO variants confer a significant risk.

Authors:  Dharambir K Sanghera; Lyda Ortega; Shizhong Han; Jairup Singh; Sarju K Ralhan; Gurpreet S Wander; Narinder K Mehra; John J Mulvihill; Robert E Ferrell; Swapan K Nath; Mohammed I Kamboh
Journal:  BMC Med Genet       Date:  2008-07-03       Impact factor: 2.103

9.  Variants in MTNR1B influence fasting glucose levels.

Authors:  Inga Prokopenko; Claudia Langenberg; Jose C Florez; Richa Saxena; Nicole Soranzo; Gudmar Thorleifsson; Ruth J F Loos; Alisa K Manning; Anne U Jackson; Yurii Aulchenko; Simon C Potter; Michael R Erdos; Serena Sanna; Jouke-Jan Hottenga; Eleanor Wheeler; Marika Kaakinen; Valeriya Lyssenko; Wei-Min Chen; Kourosh Ahmadi; Jacques S Beckmann; Richard N Bergman; Murielle Bochud; Lori L Bonnycastle; Thomas A Buchanan; Antonio Cao; Alessandra Cervino; Lachlan Coin; Francis S Collins; Laura Crisponi; Eco J C de Geus; Abbas Dehghan; Panos Deloukas; Alex S F Doney; Paul Elliott; Nelson Freimer; Vesela Gateva; Christian Herder; Albert Hofman; Thomas E Hughes; Sarah Hunt; Thomas Illig; Michael Inouye; Bo Isomaa; Toby Johnson; Augustine Kong; Maria Krestyaninova; Johanna Kuusisto; Markku Laakso; Noha Lim; Ulf Lindblad; Cecilia M Lindgren; Owen T McCann; Karen L Mohlke; Andrew D Morris; Silvia Naitza; Marco Orrù; Colin N A Palmer; Anneli Pouta; Joshua Randall; Wolfgang Rathmann; Jouko Saramies; Paul Scheet; Laura J Scott; Angelo Scuteri; Stephen Sharp; Eric Sijbrands; Jan H Smit; Kijoung Song; Valgerdur Steinthorsdottir; Heather M Stringham; Tiinamaija Tuomi; Jaakko Tuomilehto; André G Uitterlinden; Benjamin F Voight; Dawn Waterworth; H-Erich Wichmann; Gonneke Willemsen; Jacqueline C M Witteman; Xin Yuan; Jing Hua Zhao; Eleftheria Zeggini; David Schlessinger; Manjinder Sandhu; Dorret I Boomsma; Manuela Uda; Tim D Spector; Brenda Wjh Penninx; David Altshuler; Peter Vollenweider; Marjo Riitta Jarvelin; Edward Lakatta; Gerard Waeber; Caroline S Fox; Leena Peltonen; Leif C Groop; Vincent Mooser; L Adrienne Cupples; Unnur Thorsteinsdottir; Michael Boehnke; Inês Barroso; Cornelia Van Duijn; Josée Dupuis; Richard M Watanabe; Kari Stefansson; Mark I McCarthy; Nicholas J Wareham; James B Meigs; Gonçalo R Abecasis
Journal:  Nat Genet       Date:  2008-12-07       Impact factor: 38.330

10.  Six new loci associated with body mass index highlight a neuronal influence on body weight regulation.

Authors:  Cristen J Willer; Elizabeth K Speliotes; Ruth J F Loos; Shengxu Li; Cecilia M Lindgren; Iris M Heid; Sonja I Berndt; Amanda L Elliott; Anne U Jackson; Claudia Lamina; Guillaume Lettre; Noha Lim; Helen N Lyon; Steven A McCarroll; Konstantinos Papadakis; Lu Qi; Joshua C Randall; Rosa Maria Roccasecca; Serena Sanna; Paul Scheet; Michael N Weedon; Eleanor Wheeler; Jing Hua Zhao; Leonie C Jacobs; Inga Prokopenko; Nicole Soranzo; Toshiko Tanaka; Nicholas J Timpson; Peter Almgren; Amanda Bennett; Richard N Bergman; Sheila A Bingham; Lori L Bonnycastle; Morris Brown; Noël P Burtt; Peter Chines; Lachlan Coin; Francis S Collins; John M Connell; Cyrus Cooper; George Davey Smith; Elaine M Dennison; Parimal Deodhar; Paul Elliott; Michael R Erdos; Karol Estrada; David M Evans; Lauren Gianniny; Christian Gieger; Christopher J Gillson; Candace Guiducci; Rachel Hackett; David Hadley; Alistair S Hall; Aki S Havulinna; Johannes Hebebrand; Albert Hofman; Bo Isomaa; Kevin B Jacobs; Toby Johnson; Pekka Jousilahti; Zorica Jovanovic; Kay-Tee Khaw; Peter Kraft; Mikko Kuokkanen; Johanna Kuusisto; Jaana Laitinen; Edward G Lakatta; Jian'an Luan; Robert N Luben; Massimo Mangino; Wendy L McArdle; Thomas Meitinger; Antonella Mulas; Patricia B Munroe; Narisu Narisu; Andrew R Ness; Kate Northstone; Stephen O'Rahilly; Carolin Purmann; Matthew G Rees; Martin Ridderstråle; Susan M Ring; Fernando Rivadeneira; Aimo Ruokonen; Manjinder S Sandhu; Jouko Saramies; Laura J Scott; Angelo Scuteri; Kaisa Silander; Matthew A Sims; Kijoung Song; Jonathan Stephens; Suzanne Stevens; Heather M Stringham; Y C Loraine Tung; Timo T Valle; Cornelia M Van Duijn; Karani S Vimaleswaran; Peter Vollenweider; Gerard Waeber; Chris Wallace; Richard M Watanabe; Dawn M Waterworth; Nicholas Watkins; Jacqueline C M Witteman; Eleftheria Zeggini; Guangju Zhai; M Carola Zillikens; David Altshuler; Mark J Caulfield; Stephen J Chanock; I Sadaf Farooqi; Luigi Ferrucci; Jack M Guralnik; Andrew T Hattersley; Frank B Hu; Marjo-Riitta Jarvelin; Markku Laakso; Vincent Mooser; Ken K Ong; Willem H Ouwehand; Veikko Salomaa; Nilesh J Samani; Timothy D Spector; Tiinamaija Tuomi; Jaakko Tuomilehto; Manuela Uda; André G Uitterlinden; Nicholas J Wareham; Panagiotis Deloukas; Timothy M Frayling; Leif C Groop; Richard B Hayes; David J Hunter; Karen L Mohlke; Leena Peltonen; David Schlessinger; David P Strachan; H-Erich Wichmann; Mark I McCarthy; Michael Boehnke; Inês Barroso; Gonçalo R Abecasis; Joel N Hirschhorn
Journal:  Nat Genet       Date:  2008-12-14       Impact factor: 38.330

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1.  Inclusion of gene-gene and gene-environment interactions unlikely to dramatically improve risk prediction for complex diseases.

Authors:  Hugues Aschard; Jinbo Chen; Marilyn C Cornelis; Lori B Chibnik; Elizabeth W Karlson; Peter Kraft
Journal:  Am J Hum Genet       Date:  2012-05-24       Impact factor: 11.025

Review 2.  Genetics of obesity and its measures in India.

Authors:  Simmi Saini; Gagandeep Kaur Walia; Mohinder Pal Sachdeva; Vipin Gupta
Journal:  J Genet       Date:  2018-09       Impact factor: 1.166

Review 3.  Obesity and genomics: role of technology in unraveling the complex genetic architecture of obesity.

Authors:  Yamunah Devi Apalasamy; Zahurin Mohamed
Journal:  Hum Genet       Date:  2015-02-17       Impact factor: 4.132

4.  Assessment of FTO Gene Polymorphism and its Association with Type 2 Diabetes Mellitus in North Indian Populations.

Authors:  Kahkashan Naaz; Anil Kumar; Ipsita Choudhury
Journal:  Indian J Clin Biochem       Date:  2018-07-16

5.  Finding the missing gene-environment interactions.

Authors:  Peter Kraft; Hugues Aschard
Journal:  Eur J Epidemiol       Date:  2015-05       Impact factor: 8.082

6.  Type 2 Diabetes Genetics: Beyond GWAS.

Authors:  Dharambir K Sanghera; Piers R Blackett
Journal:  J Diabetes Metab       Date:  2012-06-23

7.  Obesity polymorphisms identified in genome-wide association studies interact with n-3 polyunsaturated fatty acid intake and modify the genetic association with adiposity phenotypes in Yup'ik people.

Authors:  Dominick J Lemas; Yann C Klimentidis; Howard H Wiener; Diane M O'Brien; Scarlett E Hopkins; David B Allison; Jose R Fernandez; Hemant K Tiwari; Bert B Boyer
Journal:  Genes Nutr       Date:  2013-03-23       Impact factor: 5.523

Review 8.  The importance of gene-environment interactions in human obesity.

Authors:  Hudson Reddon; Jean-Louis Guéant; David Meyre
Journal:  Clin Sci (Lond)       Date:  2016-09-01       Impact factor: 6.124

9.  Update on the State of the Science for Analytical Methods for Gene-Environment Interactions.

Authors:  W James Gauderman; Bhramar Mukherjee; Hugues Aschard; Li Hsu; Juan Pablo Lewinger; Chirag J Patel; John S Witte; Christopher Amos; Caroline G Tai; David Conti; Dara G Torgerson; Seunggeun Lee; Nilanjan Chatterjee
Journal:  Am J Epidemiol       Date:  2017-10-01       Impact factor: 5.363

Review 10.  The bigger picture of FTO: the first GWAS-identified obesity gene.

Authors:  Ruth J F Loos; Giles S H Yeo
Journal:  Nat Rev Endocrinol       Date:  2013-11-19       Impact factor: 43.330

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