Literature DB >> 2179872

A new method for the synthesis of a structural gene.

H B Chen1, J M Weng, K Jiang, J S Bao.   

Abstract

A novel method of synthesizing a structural gene or gene fragment, consisting of the first synthesis of a single-stranded DNA (ssDNA), has been developed. As a preliminary test of this method, four synthetic genes or gene fragments have been synthesized. The first one with 396 base pairs (b.p.) codes for the mature rbcS from wheat, the next two with 370 and 342 b.p. respectively, for two half molecules of a gene for trichosanthin and the last one with 315 b.p. for the N-terminal 1-102 residues of human prourokinase. In all these syntheses, a plus-stranded DNA of the target gene was generally assembled by a stepwise or one step T4 DNA ligase reaction of six oligonucleotides (A, *pB, *pC, *pD, *pE and *pF) of 30-71 nucleotides long in the presence of two terminal complementary oligonucleotides (Ab' and eF') and three short inter-fragment complementary oligonucleotides (bc, cd and de). After purification, the synthetic ssDNA was inserted into a cloning vector, pWR13. The resulting product was directly used to transform a host cell. The structure of the cloned synthetic gene was confirmed by DNA sequence analysis.

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Year:  1990        PMID: 2179872      PMCID: PMC330339          DOI: 10.1093/nar/18.4.871

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  15 in total

1.  Studies on polynucleotides. 103. Total synthesis of the structural gene for an alanine transfer ribonucleic acid from yeast.

Authors:  H G Khorana; K L Agarwal; H Büchi; M H Caruthers; N K Gupta; K Kleppe; A Kumar; E Otsuka; U L RajBhandary; J H Van de Sande; V Sgaramella; T Terao; H Weber; T Yamada
Journal:  J Mol Biol       Date:  1972-12-28       Impact factor: 5.469

2.  CXII. Total synthesis of the structural gene for an alanine transfer RNA from yeast. Enzymic joining of the chemically synthesized polydeoxynucleotides to form the DNA duplex representing nucleotide sequence 1 to 20.

Authors:  V Sgaramella; H G Khorana
Journal:  J Mol Biol       Date:  1972-12-28       Impact factor: 5.469

3.  Chemical synthesis and cloning of a tyrosine tRNA gene.

Authors:  E L Brown; R Belagaje; M J Ryan; H G Khorana
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

4.  Total synthesis of the gene for an alanine transfer ribonucleic acid from yeast.

Authors:  K L Agarwal; H Büchi; M H Caruthers; N Gupta; H G Khorana; K Kleppe; A Kumar; E Ohtsuka; U L Rajbhandary; J H Van de Sande; V Sgaramella; H Weber; T Yamada
Journal:  Nature       Date:  1970-07-04       Impact factor: 49.962

5.  The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.

Authors:  J Vieira; J Messing
Journal:  Gene       Date:  1982-10       Impact factor: 3.688

6.  Use of a new retrieving adaptor in the cloning of a synthetic human insulin A-chain gene.

Authors:  R C Scarpulla; S Narang; R Wu
Journal:  Anal Biochem       Date:  1982-04       Impact factor: 3.365

7.  Structure-function studies on bacteriorhodopsin. III. Total synthesis of a gene for bacterio-opsin and its expression in Escherichia coli.

Authors:  M Nassal; T Mogi; S S Karnik; H G Khorana
Journal:  J Biol Chem       Date:  1987-07-05       Impact factor: 5.157

8.  Cysteine residues 110 and 187 are essential for the formation of correct structure in bovine rhodopsin.

Authors:  S S Karnik; T P Sakmar; H B Chen; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

9.  In situ activation of bis-dialkylaminophosphines--a new method for synthesizing deoxyoligonucleotides on polymer supports.

Authors:  A D Barone; J Y Tang; M H Caruthers
Journal:  Nucleic Acids Res       Date:  1984-05-25       Impact factor: 16.971

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

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  4 in total

1.  Synthesis of a gene for human serum albumin and its expression in Saccharomyces cerevisiae.

Authors:  M Kálmán; I Cserpán; G Bajszár; A Dobi; E Horváth; C Pázmán; A Simoncsits
Journal:  Nucleic Acids Res       Date:  1990-10-25       Impact factor: 16.971

2.  Synthetic gene for the hepatitis C virus nucleocapsid protein.

Authors:  Y E Khudyakov; H A Fields; M O Favorov; N S Khudyakova; M T Bonafonte; B Holloway
Journal:  Nucleic Acids Res       Date:  1993-06-11       Impact factor: 16.971

3.  DNA suspension arrays: silencing discrete artifacts for high-sensitivity applications.

Authors:  Matthew S Lalonde; Eric J Arts
Journal:  PLoS One       Date:  2010-11-08       Impact factor: 3.240

4.  A rapid and simple method for DNA engineering using cycled ligation assembly.

Authors:  Theodore L Roth; Ljiljana Milenkovic; Matthew P Scott
Journal:  PLoS One       Date:  2014-09-16       Impact factor: 3.240

  4 in total

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