Literature DB >> 21770604

Collapse of DNA in ac electric fields.

Chunda Zhou1, Walter W Reisner, Rory J Staunton, Amir Ashan, Robert H Austin, Robert Riehn.   

Abstract

We report that double-stranded DNA collapses in the presence of ac electric fields at frequencies of a few hundred Hertz, and does not stretch as commonly assumed. In particular, we show that confinement-stretched DNA can collapse to about one quarter of its equilibrium length. We propose that this effect is based on finite relaxation times of the counterion cloud, and the subsequent partitioning of the molecule into mutually attractive units. We discuss alternative models of those attractive units.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21770604      PMCID: PMC3770290          DOI: 10.1103/PhysRevLett.106.248103

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  15 in total

1.  Force-extension curve of a polymer in a high-frequency electric field.

Authors:  Adam E Cohen
Journal:  Phys Rev Lett       Date:  2003-12-04       Impact factor: 9.161

2.  Electrodeless dielectrophoresis of single- and double-stranded DNA.

Authors:  Chia-Fu Chou; Jonas O Tegenfeldt; Olgica Bakajin; Shirley S Chan; Edward C Cox; Nicholas Darnton; Thomas Duke; Robert H Austin
Journal:  Biophys J       Date:  2002-10       Impact factor: 4.033

3.  From the Cover: The dynamics of genomic-length DNA molecules in 100-nm channels.

Authors:  Jonas O Tegenfeldt; Christelle Prinz; Han Cao; Steven Chou; Walter W Reisner; Robert Riehn; Yan Mei Wang; Edward C Cox; James C Sturm; Pascal Silberzan; Robert H Austin
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-13       Impact factor: 11.205

4.  Nanoconfinement-enhanced conformational response of single DNA molecules to changes in ionic environment.

Authors:  Walter Reisner; Jason P Beech; Niels B Larsen; Henrik Flyvbjerg; Anders Kristensen; Jonas O Tegenfeldt
Journal:  Phys Rev Lett       Date:  2007-08-01       Impact factor: 9.161

5.  Principal-components analysis of shape fluctuations of single DNA molecules.

Authors:  Adam E Cohen; W E Moerner
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-11       Impact factor: 11.205

6.  Conformation and dynamics of DNA confined in slitlike nanofluidic channels.

Authors:  Douwe Jan Bonthuis; Christine Meyer; Derek Stein; Cees Dekker
Journal:  Phys Rev Lett       Date:  2008-09-05       Impact factor: 9.161

7.  DNA condensation by field-induced non-equilibrium noise.

Authors:  Robijn F Bruinsma; Robert Riehn
Journal:  Chemphyschem       Date:  2009-11-09       Impact factor: 3.102

8.  Stretching of a single tethered polymer in a uniform flow.

Authors:  T T Perkins; D E Smith; R G Larson; S Chu
Journal:  Science       Date:  1995-04-07       Impact factor: 47.728

9.  Segregation in DNA solutions induced by electric fields.

Authors:  L Mitnik; C Heller; J Prost; J L Viovy
Journal:  Science       Date:  1995-01-13       Impact factor: 47.728

10.  Separation of 4-color DNA sequencing extension products in noncovalently coated capillaries using low viscosity polymer solutions.

Authors:  R S Madabhushi
Journal:  Electrophoresis       Date:  1998-02       Impact factor: 3.535

View more
  7 in total

1.  Manipulating single annealed polyelectrolyte under alternating current electric fields: Collapse versus accumulation.

Authors:  Shengqin Wang; Yingxi Zhu
Journal:  Biomicrofluidics       Date:  2012-05-01       Impact factor: 2.800

2.  Collapse of DNA under alternating electric fields.

Authors:  Chunda Zhou; Robert Riehn
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-07-20

3.  Compression and self-entanglement of single DNA molecules under uniform electric field.

Authors:  Jing Tang; Ning Du; Patrick S Doyle
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-12       Impact factor: 11.205

4.  Enhanced electrohydrodynamic collapse of DNA due to dilute polymers.

Authors:  C Benjamin Renner; Ning Du; Patrick S Doyle
Journal:  Biomicrofluidics       Date:  2014-05-14       Impact factor: 2.800

5.  SENSING DNA WITH ALTERNATING CURRENTS USING A NANOGAP SENSOR EMBEDDED IN A NANOCHANNEL DEVICE.

Authors:  Bret H Davis; Junhan Pan; Chih-Kuan Tung; Robert H Austin; Robert Riehn
Journal:  Nano Life       Date:  2013-03

6.  Transverse dielectrophoretic-based DNA nanoscale confinement.

Authors:  Sara Mahshid; Jia Lu; Abrar A Abidi; Robert Sladek; Walter W Reisner; Mohammed Jalal Ahamed
Journal:  Sci Rep       Date:  2018-04-13       Impact factor: 4.379

7.  Polyelectrolyte in Electric Field: Disparate Conformational Behavior along an Aminopolysaccharide Chain.

Authors:  Paween Mahinthichaichan; Cheng-Chieh Tsai; Gregory F Payne; Jana Shen
Journal:  ACS Omega       Date:  2020-05-19
  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.