Literature DB >> 21767968

Optimized linear prediction for radial sampled multidimensional NMR experiments.

John M Gledhill1, Vignesh Kasinath, A Joshua Wand.   

Abstract

Radial sampling in multidimensional NMR experiments offers greatly decreased acquisition times while also providing an avenue for increased sensitivity. Digital resolution remains a concern and depends strongly upon the extent of sampling of individual radial angles. Truncated time domain data leads to spurious peaks (artifacts) upon FT and 2D FT. Linear prediction is commonly employed to improve resolution in Cartesian sampled NMR experiments. Here, we adapt the linear prediction method to radial sampling. Significantly more accurate estimates of linear prediction coefficients are obtained by combining quadrature frequency components from the multiple angle spectra. This approach results in significant improvement in both resolution and removal of spurious peaks as compared to traditional linear prediction methods applied to radial sampled data. The 'averaging linear prediction' (ALP) method is demonstrated as a general tool for resolution improvement in multidimensional radial sampled experiments.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21767968      PMCID: PMC3163723          DOI: 10.1016/j.jmr.2011.06.019

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  17 in total

Review 1.  Radial sampling for fast NMR: Concepts and practices over three decades.

Authors:  Brian E Coggins; Ronald A Venters; Pei Zhou
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-07-30       Impact factor: 9.795

Review 2.  Random sampling in multidimensional NMR spectroscopy.

Authors:  Krzysztof Kazimierczuk; Jan Stanek; Anna Zawadzka-Kazimierczuk; Wiktor Koźmiński
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-08-03       Impact factor: 9.795

3.  Addressing the overlap problem in the quantitative analysis of two dimensional NMR spectra: application to (15)N relaxation measurements.

Authors:  Vitali Tugarinov; Wing-Yiu Choy; Eriks Kupce; Lewis E Kay
Journal:  J Biomol NMR       Date:  2004-11       Impact factor: 2.835

4.  High-resolution iterative frequency identification for NMR as a general strategy for multidimensional data collection.

Authors:  Hamid R Eghbalnia; Arash Bahrami; Marco Tonelli; Klaas Hallenga; John L Markley
Journal:  J Am Chem Soc       Date:  2005-09-14       Impact factor: 15.419

5.  (4,2)D Projection--reconstruction experiments for protein backbone assignment: application to human carbonic anhydrase II and calbindin D(28K).

Authors:  Ronald A Venters; Brian E Coggins; Doug Kojetin; John Cavanagh; Pei Zhou
Journal:  J Am Chem Soc       Date:  2005-06-22       Impact factor: 15.419

6.  Automated projection spectroscopy (APSY).

Authors:  Sebastian Hiller; Francesco Fiorito; Kurt Wüthrich; Gerhard Wider
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-25       Impact factor: 11.205

7.  Application of linear prediction and singular value decomposition (LPSVD) to determine NMR frequencies and intensities from the FID.

Authors:  H Barkhuijsen; R de Beer; W M Bovee; J H Creyghton; D van Ormondt
Journal:  Magn Reson Med       Date:  1985-02       Impact factor: 4.668

8.  Rapid assignment of protein side chain resonances using projection-reconstruction of (4,3)D HC(CCO)NH and intra-HC(C)NH experiments.

Authors:  Ling Jiang; Brian E Coggins; Pei Zhou
Journal:  J Magn Reson       Date:  2005-07       Impact factor: 2.229

9.  Optimized angle selection for radial sampled NMR experiments.

Authors:  John M Gledhill; A Joshua Wand
Journal:  J Magn Reson       Date:  2008-09-11       Impact factor: 2.229

10.  Internal dynamics of human ubiquitin revealed by 13C-relaxation studies of randomly fractionally labeled protein.

Authors:  A J Wand; J L Urbauer; R P McEvoy; R J Bieber
Journal:  Biochemistry       Date:  1996-05-14       Impact factor: 3.162

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