| Literature DB >> 21754913 |
Abstract
The title structure, C(6)H(4)N(2)·C(8)H(8)O(2), is built up from an assembly of isonicotinonitrile and 4-methyl-benzoic acid mol-ecules and may be regarded as a co-crystal. The two planar mol-ecules [r.m.s. deviations of 0.002 (6) and 0.0028 (11) Å, respectively] are linked by O-H⋯N and C-H⋯O hydrogen bonds. They are nearly coplanar and only twisted from each other by a dihedral angle of 2.48 (6)°. In the crystal, the components are inter-connected by slipped π-π stacking [centroid-centroid distance = 3.6797 (11), slippage = 1.304 Å] and inter-molecular C-H⋯N inter-actions.Entities:
Year: 2011 PMID: 21754913 PMCID: PMC3120448 DOI: 10.1107/S1600536811019799
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H4N2·C8H8O2 | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 3221 reflections |
| θ = 3.1–27.5° | |
| µ = 0.09 mm−1 | |
| β = 94.20 (3)° | Block, colourless |
| 0.40 × 0.30 × 0.20 mm | |
| Rigaku Mercury2 diffractometer | 2752 independent reflections |
| Radiation source: fine-focus sealed tube | 2416 reflections with |
| graphite | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 1.7° |
| profile data from φ scans | |
| Absorption correction: multi-scan ( | |
| 11659 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2752 reflections | (Δ/σ)max = 0.001 |
| 165 parameters | Δρmax = 0.28 e Å−3 |
| 0 restraints | Δρmin = −0.18 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| N1 | 0.43937 (13) | 0.09948 (8) | 0.42051 (4) | 0.0221 (2) | |
| N2 | −0.17678 (14) | 0.10802 (9) | 0.29801 (4) | 0.0277 (3) | |
| C1 | 0.28921 (16) | 0.13083 (9) | 0.44087 (5) | 0.0230 (3) | |
| H1A | 0.2943 | 0.1523 | 0.4768 | 0.028* | |
| C2 | 0.12616 (16) | 0.13288 (9) | 0.41101 (5) | 0.0234 (3) | |
| H2A | 0.0238 | 0.1547 | 0.4264 | 0.028* | |
| C3 | 0.12108 (15) | 0.10120 (8) | 0.35729 (5) | 0.0197 (3) | |
| C4 | 0.27629 (16) | 0.06891 (10) | 0.33537 (5) | 0.0246 (3) | |
| H4A | 0.2754 | 0.0473 | 0.2995 | 0.030* | |
| C5 | 0.43222 (16) | 0.06995 (10) | 0.36861 (5) | 0.0256 (3) | |
| H5A | 0.5369 | 0.0491 | 0.3542 | 0.031* | |
| C6 | −0.04509 (16) | 0.10367 (9) | 0.32417 (5) | 0.0224 (3) | |
| O1 | 0.73800 (11) | 0.10321 (7) | 0.48667 (3) | 0.0269 (2) | |
| H1 | 0.6481 | 0.1058 | 0.4659 | 0.040* | |
| O2 | 0.55361 (11) | 0.16298 (7) | 0.54594 (4) | 0.0289 (2) | |
| C7 | 1.30335 (18) | 0.15462 (10) | 0.69515 (5) | 0.0299 (3) | |
| H7A | 1.4122 | 0.1618 | 0.6776 | 0.045* | |
| H7B | 1.3066 | 0.0923 | 0.7158 | 0.045* | |
| H7C | 1.2898 | 0.2118 | 0.7189 | 0.045* | |
| C8 | 1.14836 (17) | 0.15140 (9) | 0.65291 (5) | 0.0234 (3) | |
| C9 | 1.16972 (16) | 0.11425 (9) | 0.60095 (5) | 0.0244 (3) | |
| H9A | 1.2815 | 0.0926 | 0.5920 | 0.029* | |
| C10 | 1.02690 (16) | 0.10904 (9) | 0.56240 (5) | 0.0227 (3) | |
| H10A | 1.0432 | 0.0835 | 0.5280 | 0.027* | |
| C11 | 0.85908 (15) | 0.14193 (8) | 0.57500 (5) | 0.0195 (3) | |
| C12 | 0.83696 (17) | 0.17952 (9) | 0.62657 (5) | 0.0248 (3) | |
| H12A | 0.7254 | 0.2016 | 0.6354 | 0.030* | |
| C13 | 0.98023 (18) | 0.18425 (10) | 0.66492 (5) | 0.0272 (3) | |
| H13A | 0.9636 | 0.2098 | 0.6993 | 0.033* | |
| C14 | 0.70140 (15) | 0.13749 (9) | 0.53480 (5) | 0.0203 (3) |
| N1 | 0.0212 (5) | 0.0233 (5) | 0.0215 (5) | −0.0027 (4) | 0.0000 (4) | 0.0016 (4) |
| N2 | 0.0229 (5) | 0.0348 (6) | 0.0251 (5) | 0.0010 (4) | −0.0008 (4) | −0.0017 (4) |
| C1 | 0.0243 (6) | 0.0241 (6) | 0.0205 (5) | −0.0011 (4) | 0.0001 (4) | −0.0021 (4) |
| C2 | 0.0216 (6) | 0.0256 (6) | 0.0229 (6) | 0.0004 (4) | 0.0010 (4) | −0.0021 (4) |
| C3 | 0.0201 (6) | 0.0174 (5) | 0.0212 (6) | −0.0025 (4) | −0.0009 (4) | 0.0014 (4) |
| C4 | 0.0252 (6) | 0.0292 (6) | 0.0194 (5) | 0.0010 (5) | 0.0008 (4) | −0.0019 (4) |
| C5 | 0.0205 (6) | 0.0330 (7) | 0.0234 (6) | 0.0017 (5) | 0.0027 (4) | 0.0007 (5) |
| C6 | 0.0233 (6) | 0.0231 (6) | 0.0210 (5) | −0.0005 (4) | 0.0020 (5) | −0.0015 (4) |
| O1 | 0.0188 (4) | 0.0422 (5) | 0.0194 (4) | 0.0009 (4) | −0.0011 (3) | −0.0046 (4) |
| O2 | 0.0200 (5) | 0.0370 (5) | 0.0295 (5) | 0.0029 (4) | 0.0000 (3) | −0.0074 (4) |
| C7 | 0.0301 (7) | 0.0302 (7) | 0.0279 (6) | −0.0046 (5) | −0.0085 (5) | 0.0007 (5) |
| C8 | 0.0263 (6) | 0.0208 (6) | 0.0223 (6) | −0.0048 (4) | −0.0037 (5) | 0.0030 (4) |
| C9 | 0.0196 (6) | 0.0288 (6) | 0.0249 (6) | −0.0008 (4) | 0.0015 (4) | 0.0019 (5) |
| C10 | 0.0217 (6) | 0.0275 (6) | 0.0189 (5) | −0.0023 (5) | 0.0019 (4) | −0.0001 (4) |
| C11 | 0.0208 (6) | 0.0177 (5) | 0.0198 (5) | −0.0027 (4) | 0.0009 (4) | 0.0010 (4) |
| C12 | 0.0234 (6) | 0.0259 (6) | 0.0253 (6) | 0.0006 (5) | 0.0024 (5) | −0.0032 (5) |
| C13 | 0.0320 (7) | 0.0289 (6) | 0.0205 (5) | −0.0012 (5) | −0.0002 (5) | −0.0044 (5) |
| C14 | 0.0205 (6) | 0.0186 (5) | 0.0220 (6) | −0.0024 (4) | 0.0018 (4) | 0.0003 (4) |
| N1—C1 | 1.3362 (16) | C7—C8 | 1.5100 (17) |
| N1—C5 | 1.3384 (16) | C7—H7A | 0.9600 |
| N2—C6 | 1.1461 (16) | C7—H7B | 0.9600 |
| C1—C2 | 1.3871 (17) | C7—H7C | 0.9600 |
| C1—H1A | 0.9300 | C8—C13 | 1.3903 (18) |
| C2—C3 | 1.3903 (16) | C8—C9 | 1.3946 (17) |
| C2—H2A | 0.9300 | C9—C10 | 1.3866 (17) |
| C3—C4 | 1.3903 (17) | C9—H9A | 0.9300 |
| C3—C6 | 1.4459 (17) | C10—C11 | 1.3925 (17) |
| C4—C5 | 1.3844 (17) | C10—H10A | 0.9300 |
| C4—H4A | 0.9300 | C11—C12 | 1.3886 (16) |
| C5—H5A | 0.9300 | C11—C14 | 1.4942 (16) |
| O1—C14 | 1.3202 (14) | C12—C13 | 1.3858 (18) |
| O1—H1 | 0.8200 | C12—H12A | 0.9300 |
| O2—C14 | 1.2134 (15) | C13—H13A | 0.9300 |
| C1—N1—C5 | 118.32 (10) | H7B—C7—H7C | 109.5 |
| N1—C1—C2 | 123.14 (11) | C13—C8—C9 | 118.23 (11) |
| N1—C1—H1A | 118.4 | C13—C8—C7 | 120.95 (11) |
| C2—C1—H1A | 118.4 | C9—C8—C7 | 120.82 (11) |
| C1—C2—C3 | 117.72 (11) | C10—C9—C8 | 121.01 (11) |
| C1—C2—H2A | 121.1 | C10—C9—H9A | 119.5 |
| C3—C2—H2A | 121.1 | C8—C9—H9A | 119.5 |
| C4—C3—C2 | 119.88 (11) | C9—C10—C11 | 120.19 (11) |
| C4—C3—C6 | 120.28 (10) | C9—C10—H10A | 119.9 |
| C2—C3—C6 | 119.83 (11) | C11—C10—H10A | 119.9 |
| C5—C4—C3 | 117.85 (11) | C12—C11—C10 | 119.13 (11) |
| C5—C4—H4A | 121.1 | C12—C11—C14 | 118.85 (11) |
| C3—C4—H4A | 121.1 | C10—C11—C14 | 122.01 (10) |
| N1—C5—C4 | 123.09 (11) | C13—C12—C11 | 120.35 (11) |
| N1—C5—H5A | 118.5 | C13—C12—H12A | 119.8 |
| C4—C5—H5A | 118.5 | C11—C12—H12A | 119.8 |
| N2—C6—C3 | 178.44 (13) | C12—C13—C8 | 121.09 (11) |
| C14—O1—H1 | 109.5 | C12—C13—H13A | 119.5 |
| C8—C7—H7A | 109.5 | C8—C13—H13A | 119.5 |
| C8—C7—H7B | 109.5 | O2—C14—O1 | 123.63 (11) |
| H7A—C7—H7B | 109.5 | O2—C14—C11 | 122.45 (10) |
| C8—C7—H7C | 109.5 | O1—C14—C11 | 113.91 (10) |
| H7A—C7—H7C | 109.5 |
| H··· | ||||
| O1—H1···N1 | 0.82 | 1.87 | 2.6850 (15) | 175 |
| C1—H1A···O2 | 0.93 | 2.51 | 3.1858 (18) | 130 |
| C4—H4A···N2i | 0.93 | 2.60 | 3.3700 (18) | 141 |
| CgI | CgJ | CgI···CgJa | CgI···P(J)b | CgJ···P(I)c | Slippage |
| Cg1 | Cg2ii | 3.6797 (11) | 3.440 | 3.443 | 1.304 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯N1 | 0.82 | 1.87 | 2.6850 (15) | 175 |
| C1—H1 | 0.93 | 2.51 | 3.1858 (18) | 130 |
| C4—H4 | 0.93 | 2.60 | 3.3700 (18) | 141 |
Symmetry code: (i) .