Literature DB >> 21754789

5,6-Dihydro-2H-1,3-dithiolo[4,5-b][1,4]dioxine-2-thione.

Guan-Nan Wang, Xun-Wen Xiao, Tongjiang Cai, Qin Huang.   

Abstract

The title mol-ecule, C(5)H(4)O(2)S(3), consists of a planar [mean deviation = 0.020 (1) Å] 1,3-dithiole-2-thione unit with an ethyl-enedi-oxy group in the 4,5-positions. The dioxine ring is in a twist-chair conformation.

Entities:  

Year:  2011        PMID: 21754789      PMCID: PMC3120295          DOI: 10.1107/S1600536811017417

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Kanchanadevi et al. (2010 ▶); Rizvi et al. (2010 ▶); Suzuki et al. (1989 ▶); Xu et al. (2009 ▶); Sugumar et al. (2008 ▶). For the synthesis of the title compound, see: Hartke & Lindenblatt (1990 ▶); Suzuki et al. (1989 ▶).

Experimental

Crystal data

C5H4O2S3 M = 192.26 Monoclinic, a = 5.4645 (8) Å b = 13.430 (2) Å c = 9.8189 (16) Å β = 91.294 (3)° V = 720.41 (19) Å3 Z = 4 Mo Kα radiation μ = 0.96 mm−1 T = 223 K 0.55 × 0.20 × 0.20 mm

Data collection

Rigaku Saturn diffractometer Absorption correction: multi-scan (REQAB; Jacobson, 1998 ▶) T min = 0.605, T max = 0.826 3605 measured reflections 1332 independent reflections 1199 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.083 S = 1.17 1332 reflections 92 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.41 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalStructure (Rigaku, 2005 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811017417/aa2007sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811017417/aa2007Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811017417/aa2007Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C5H4O2S3F(000) = 392
Mr = 192.26Dx = 1.773 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71075 Å
Hall symbol: -P 2ynCell parameters from 3311 reflections
a = 5.4645 (8) Åθ = 3.0–27.5°
b = 13.430 (2) ŵ = 0.96 mm1
c = 9.8189 (16) ÅT = 223 K
β = 91.294 (3)°Block, yellow
V = 720.41 (19) Å30.55 × 0.20 × 0.20 mm
Z = 4
Rigaku Saturn diffractometer1332 independent reflections
Radiation source: fine-focus sealed tube1199 reflections with I > 2σ(I)
graphiteRint = 0.021
Detector resolution: 14.63 pixels mm-1θmax = 25.5°, θmin = 3.0°
ω scansh = −6→6
Absorption correction: multi-scan (REQAB; Jacobson, 1998)k = −14→16
Tmin = 0.605, Tmax = 0.826l = −11→9
3605 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.083H-atom parameters constrained
S = 1.17w = 1/[σ2(Fo2) + (0.0486P)2 + 0.013P] where P = (Fo2 + 2Fc2)/3
1332 reflections(Δ/σ)max < 0.001
92 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.41 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S11.15131 (11)0.20574 (4)1.05803 (6)0.0394 (2)
S20.77835 (10)0.36220 (4)0.99990 (5)0.03292 (19)
S31.18427 (10)0.33798 (4)0.81841 (6)0.03387 (19)
O10.6189 (3)0.51707 (11)0.85167 (16)0.0381 (4)
O21.0238 (3)0.49167 (11)0.66988 (16)0.0367 (4)
C11.0418 (4)0.29782 (14)0.9629 (2)0.0282 (5)
C20.7954 (4)0.44643 (15)0.8651 (2)0.0276 (4)
C30.9812 (4)0.43492 (14)0.7810 (2)0.0280 (5)
C40.6183 (4)0.55689 (18)0.7147 (2)0.0412 (6)
H4A0.51990.61790.71150.049*
H4B0.54190.50860.65230.049*
C50.8699 (5)0.57960 (16)0.6687 (2)0.0413 (6)
H5A0.86070.60690.57610.050*
H5B0.94370.63030.72860.050*
U11U22U33U12U13U23
S10.0427 (4)0.0365 (3)0.0392 (4)0.0112 (2)0.0020 (3)0.0078 (2)
S20.0318 (3)0.0340 (3)0.0333 (3)0.0071 (2)0.0086 (2)0.0068 (2)
S30.0289 (3)0.0393 (3)0.0337 (3)0.0073 (2)0.0071 (2)0.0031 (2)
O10.0372 (8)0.0368 (8)0.0406 (9)0.0126 (7)0.0095 (7)0.0107 (7)
O20.0364 (8)0.0400 (9)0.0340 (9)0.0041 (7)0.0079 (7)0.0105 (6)
C10.0288 (11)0.0264 (11)0.0295 (11)0.0008 (8)0.0001 (9)−0.0033 (8)
C20.0276 (10)0.0260 (10)0.0293 (11)0.0013 (8)0.0010 (8)0.0018 (8)
C30.0256 (10)0.0289 (10)0.0296 (11)−0.0021 (8)−0.0003 (9)0.0015 (8)
C40.0417 (13)0.0424 (12)0.0394 (13)0.0116 (11)0.0019 (10)0.0134 (10)
C50.0499 (14)0.0354 (12)0.0387 (13)0.0029 (10)0.0026 (11)0.0091 (10)
S1—C11.654 (2)O2—C51.450 (3)
S2—C11.725 (2)C2—C31.332 (3)
S2—C21.746 (2)C4—C51.488 (3)
S3—C11.720 (2)C4—H4A0.9800
S3—C31.744 (2)C4—H4B0.9800
O1—C21.357 (2)C5—H5A0.9800
O1—C41.447 (3)C5—H5B0.9800
O2—C31.356 (2)
C1—S2—C296.07 (10)O1—C4—C5112.07 (18)
C1—S3—C396.32 (9)O1—C4—H4A109.2
C2—O1—C4109.56 (15)C5—C4—H4A109.2
C3—O2—C5110.75 (15)O1—C4—H4B109.2
S1—C1—S3122.39 (12)C5—C4—H4B109.2
S1—C1—S2123.28 (13)H4A—C4—H4B107.9
S3—C1—S2114.33 (12)O2—C5—C4111.73 (18)
C3—C2—O1124.84 (18)O2—C5—H5A109.3
C3—C2—S2116.70 (16)C4—C5—H5A109.3
O1—C2—S2118.45 (14)O2—C5—H5B109.3
C2—C3—O2125.52 (18)C4—C5—H5B109.3
C2—C3—S3116.52 (16)H5A—C5—H5B107.9
O2—C3—S3117.97 (14)
C3—S3—C1—S1−177.35 (13)O1—C2—C3—S3−179.51 (15)
C3—S3—C1—S22.19 (13)S2—C2—C3—S3−0.7 (2)
C2—S2—C1—S1177.05 (14)C5—O2—C3—C211.6 (3)
C2—S2—C1—S3−2.48 (13)C5—O2—C3—S3−168.64 (15)
C4—O1—C2—C317.2 (3)C1—S3—C3—C2−0.90 (19)
C4—O1—C2—S2−161.53 (15)C1—S3—C3—O2179.31 (15)
C1—S2—C2—C31.93 (18)C2—O1—C4—C5−45.5 (3)
C1—S2—C2—O1−179.19 (16)C3—O2—C5—C4−39.8 (2)
O1—C2—C3—O20.3 (3)O1—C4—C5—O259.5 (3)
S2—C2—C3—O2179.05 (15)
  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  5,7-Bis(1-benzothio-phen-2-yl)-2,3-dihydro-thieno[3,4-b][1,4]dioxine.

Authors:  P Sugumar; S Ranjith; J Arul Clement; A K Mohanakrishnan; M N Ponnuswamy
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-10

3.  2-Chloro-methyl-2,3-dihydro-thieno[3,4-b][1,4]dioxine.

Authors:  Jian Xu; Hao Xu; Ji-Cai Quan; Fei Sha; Cheng Yao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-06

4.  (E)-3-(2-Chloro-6-methyl-3-quinol-yl)-1-(2,3-dihydro-1,4-benzodioxin-6-yl)prop-2-en-1-one.

Authors:  Syed Umar Farooq Rizvi; Hamid Latif Siddiqui; Tanvir Hussain; Muhammad Azam; Masood Parvez
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-03

5.  7-Phenyl-sulfonyl-2,3-dihydro-7H-1,4-benzodioxino[6,7-b]carbazole.

Authors:  J Kanchanadevi; V Dhayalan; A K Mohanakrishnan; G Anbalagan; G Chakkaravarthi; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-20
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.