| Literature DB >> 21754736 |
Hoong-Kun Fun, Ching Kheng Quah, Chengmei Huang, Haitao Yu.
Abstract
In the isoquinoline ring system of the title mol-ecule, C(16)H(16)N(2)O(5), the N-heterocyclic ring is in a half-boat conformation. The dioxaaza-spiro ring is essentially planar [maximum deviation = 0.022 (1) Å] and forms a dihedral angle of 24.56 (4)° with the benzene ring.Entities:
Year: 2011 PMID: 21754736 PMCID: PMC3120469 DOI: 10.1107/S1600536811016266
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H16N2O5 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 9541 reflections |
| θ = 2.7–38.9° | |
| µ = 0.11 mm−1 | |
| β = 105.294 (1)° | Block, colourless |
| 0.46 × 0.31 × 0.27 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 8265 independent reflections |
| Radiation source: fine-focus sealed tube | 6842 reflections with |
| graphite | |
| φ and ω scans | θmax = 39.1°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 44501 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 8265 reflections | (Δ/σ)max = 0.001 |
| 212 parameters | Δρmax = 0.50 e Å−3 |
| 0 restraints | Δρmin = −0.37 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 0.98692 (10) | 0.07763 (2) | 1.21672 (11) | 0.01961 (12) | |
| O2 | 0.97185 (10) | 0.22835 (2) | 1.29761 (11) | 0.02036 (12) | |
| O3 | 0.64272 (8) | 0.074342 (18) | 0.93351 (9) | 0.01245 (10) | |
| O4 | 0.80974 (8) | 0.037356 (19) | 0.72911 (9) | 0.01405 (10) | |
| O5 | 0.50850 (8) | 0.06418 (2) | 0.59672 (9) | 0.01442 (10) | |
| N1 | 0.99366 (9) | 0.15373 (2) | 1.23860 (10) | 0.01288 (11) | |
| N2 | 0.98329 (9) | 0.10159 (2) | 0.78175 (11) | 0.01329 (11) | |
| C1 | 0.91387 (11) | 0.11323 (3) | 1.15734 (11) | 0.01266 (12) | |
| C2 | 0.89437 (11) | 0.19420 (3) | 1.22005 (11) | 0.01288 (12) | |
| C3 | 0.68983 (10) | 0.19200 (2) | 1.11676 (11) | 0.01123 (11) | |
| C4 | 0.57505 (11) | 0.22751 (2) | 1.14283 (12) | 0.01418 (12) | |
| H4A | 0.6279 | 0.2526 | 1.2171 | 0.017* | |
| C5 | 0.38157 (12) | 0.22526 (3) | 1.05764 (13) | 0.01604 (13) | |
| H5A | 0.3048 | 0.2489 | 1.0743 | 0.019* | |
| C6 | 0.30314 (11) | 0.18742 (3) | 0.94723 (12) | 0.01532 (13) | |
| H6A | 0.1739 | 0.1860 | 0.8893 | 0.018* | |
| C7 | 0.41660 (11) | 0.15171 (3) | 0.92290 (11) | 0.01323 (12) | |
| H7A | 0.3630 | 0.1264 | 0.8506 | 0.016* | |
| C8 | 0.61080 (10) | 0.15391 (2) | 1.00719 (10) | 0.01055 (11) | |
| C9 | 0.73909 (10) | 0.11699 (2) | 0.97884 (11) | 0.01041 (11) | |
| C10 | 0.67607 (10) | 0.07134 (2) | 0.73762 (11) | 0.01101 (11) | |
| C11 | 0.98054 (11) | 0.05895 (3) | 0.76219 (12) | 0.01374 (12) | |
| C12 | 0.79021 (10) | 0.11558 (2) | 0.76495 (11) | 0.01075 (11) | |
| C13 | 0.72971 (12) | 0.15463 (3) | 0.62183 (12) | 0.01482 (13) | |
| H13A | 0.7495 | 0.1475 | 0.4909 | 0.022* | |
| H13B | 0.8025 | 0.1806 | 0.6771 | 0.022* | |
| H13C | 0.5986 | 0.1607 | 0.6063 | 0.022* | |
| C14 | 1.18102 (12) | 0.15176 (3) | 1.38319 (13) | 0.01961 (15) | |
| H14A | 1.2585 | 0.1311 | 1.3338 | 0.029* | |
| H14B | 1.1695 | 0.1420 | 1.5143 | 0.029* | |
| H14C | 1.2376 | 0.1809 | 1.3961 | 0.029* | |
| C15 | 0.51787 (13) | 0.05535 (3) | 0.39061 (13) | 0.02037 (15) | |
| H15A | 0.3927 | 0.0530 | 0.3024 | 0.031* | |
| H15B | 0.5840 | 0.0278 | 0.3874 | 0.031* | |
| H15C | 0.5831 | 0.0794 | 0.3447 | 0.031* | |
| C16 | 1.14282 (12) | 0.02931 (3) | 0.76728 (17) | 0.02177 (17) | |
| H16A | 1.2575 | 0.0462 | 0.8101 | 0.033* | |
| H16B | 1.1314 | 0.0173 | 0.6333 | 0.033* | |
| H16C | 1.1448 | 0.0053 | 0.8618 | 0.033* |
| O1 | 0.0194 (3) | 0.0141 (2) | 0.0220 (3) | 0.0030 (2) | −0.0004 (2) | 0.0036 (2) |
| O2 | 0.0186 (3) | 0.0147 (3) | 0.0249 (3) | −0.0053 (2) | 0.0006 (2) | −0.0044 (2) |
| O3 | 0.0150 (2) | 0.0102 (2) | 0.0132 (2) | −0.00369 (17) | 0.00555 (17) | −0.00184 (17) |
| O4 | 0.0112 (2) | 0.0101 (2) | 0.0215 (3) | −0.00064 (17) | 0.00536 (18) | −0.00282 (18) |
| O5 | 0.0113 (2) | 0.0169 (2) | 0.0144 (2) | −0.00187 (18) | 0.00209 (17) | −0.00453 (19) |
| N1 | 0.0106 (2) | 0.0138 (3) | 0.0126 (2) | −0.00073 (19) | 0.00022 (18) | −0.0006 (2) |
| N2 | 0.0113 (2) | 0.0118 (2) | 0.0179 (3) | −0.00080 (19) | 0.0059 (2) | −0.0016 (2) |
| C1 | 0.0126 (3) | 0.0126 (3) | 0.0121 (3) | 0.0000 (2) | 0.0022 (2) | 0.0005 (2) |
| C2 | 0.0132 (3) | 0.0125 (3) | 0.0123 (3) | −0.0019 (2) | 0.0022 (2) | −0.0002 (2) |
| C3 | 0.0124 (3) | 0.0104 (3) | 0.0106 (2) | −0.0008 (2) | 0.0026 (2) | 0.0001 (2) |
| C4 | 0.0174 (3) | 0.0106 (3) | 0.0146 (3) | 0.0006 (2) | 0.0044 (2) | −0.0004 (2) |
| C5 | 0.0169 (3) | 0.0143 (3) | 0.0176 (3) | 0.0039 (2) | 0.0058 (2) | 0.0005 (2) |
| C6 | 0.0117 (3) | 0.0175 (3) | 0.0164 (3) | 0.0022 (2) | 0.0031 (2) | 0.0001 (2) |
| C7 | 0.0113 (3) | 0.0146 (3) | 0.0133 (3) | 0.0000 (2) | 0.0022 (2) | −0.0016 (2) |
| C8 | 0.0114 (3) | 0.0107 (3) | 0.0095 (2) | −0.0003 (2) | 0.00277 (19) | −0.0006 (2) |
| C9 | 0.0110 (3) | 0.0094 (2) | 0.0107 (2) | −0.0013 (2) | 0.00248 (19) | −0.0008 (2) |
| C10 | 0.0104 (3) | 0.0102 (3) | 0.0127 (3) | −0.0006 (2) | 0.0035 (2) | −0.0015 (2) |
| C11 | 0.0116 (3) | 0.0123 (3) | 0.0183 (3) | −0.0008 (2) | 0.0056 (2) | −0.0020 (2) |
| C12 | 0.0112 (3) | 0.0098 (3) | 0.0117 (3) | −0.0006 (2) | 0.0040 (2) | −0.0009 (2) |
| C13 | 0.0187 (3) | 0.0124 (3) | 0.0145 (3) | 0.0010 (2) | 0.0064 (2) | 0.0021 (2) |
| C14 | 0.0131 (3) | 0.0241 (4) | 0.0178 (3) | −0.0014 (3) | −0.0026 (2) | 0.0012 (3) |
| C15 | 0.0215 (4) | 0.0237 (4) | 0.0149 (3) | −0.0007 (3) | 0.0030 (3) | −0.0056 (3) |
| C16 | 0.0140 (3) | 0.0152 (3) | 0.0374 (5) | 0.0019 (3) | 0.0092 (3) | −0.0041 (3) |
| O1—C1 | 1.2116 (10) | C6—C7 | 1.3914 (11) |
| O2—C2 | 1.2183 (9) | C6—H6A | 0.9300 |
| O3—C10 | 1.4158 (9) | C7—C8 | 1.3946 (10) |
| O3—C9 | 1.4512 (9) | C7—H7A | 0.9300 |
| O4—C11 | 1.3784 (9) | C8—C9 | 1.4972 (10) |
| O4—C10 | 1.4257 (9) | C9—C12 | 1.5921 (10) |
| O5—C10 | 1.3636 (9) | C10—C12 | 1.5508 (10) |
| O5—C15 | 1.4416 (10) | C11—C16 | 1.4804 (11) |
| N1—C1 | 1.3933 (10) | C12—C13 | 1.5075 (10) |
| N1—C2 | 1.4012 (10) | C13—H13A | 0.9600 |
| N1—C14 | 1.4679 (10) | C13—H13B | 0.9600 |
| N2—C11 | 1.2799 (10) | C13—H13C | 0.9600 |
| N2—C12 | 1.4574 (10) | C14—H14A | 0.9600 |
| C1—C9 | 1.5206 (10) | C14—H14B | 0.9600 |
| C2—C3 | 1.4857 (10) | C14—H14C | 0.9600 |
| C3—C4 | 1.3961 (10) | C15—H15A | 0.9600 |
| C3—C8 | 1.3990 (10) | C15—H15B | 0.9600 |
| C4—C5 | 1.3907 (12) | C15—H15C | 0.9600 |
| C4—H4A | 0.9300 | C16—H16A | 0.9600 |
| C5—C6 | 1.3941 (12) | C16—H16B | 0.9600 |
| C5—H5A | 0.9300 | C16—H16C | 0.9600 |
| C10—O3—C9 | 93.33 (5) | O5—C10—O4 | 111.53 (6) |
| C11—O4—C10 | 105.68 (6) | O3—C10—O4 | 112.06 (6) |
| C10—O5—C15 | 116.23 (6) | O5—C10—C12 | 125.39 (6) |
| C1—N1—C2 | 123.91 (6) | O3—C10—C12 | 93.25 (5) |
| C1—N1—C14 | 116.97 (7) | O4—C10—C12 | 104.67 (6) |
| C2—N1—C14 | 118.08 (7) | N2—C11—O4 | 118.12 (7) |
| C11—N2—C12 | 106.79 (6) | N2—C11—C16 | 127.02 (7) |
| O1—C1—N1 | 121.77 (7) | O4—C11—C16 | 114.85 (7) |
| O1—C1—C9 | 122.53 (7) | N2—C12—C13 | 112.88 (6) |
| N1—C1—C9 | 115.52 (6) | N2—C12—C10 | 104.58 (6) |
| O2—C2—N1 | 120.65 (7) | C13—C12—C10 | 121.57 (6) |
| O2—C2—C3 | 122.79 (7) | N2—C12—C9 | 113.37 (6) |
| N1—C2—C3 | 116.38 (6) | C13—C12—C9 | 117.72 (6) |
| C4—C3—C8 | 120.27 (7) | C10—C12—C9 | 83.13 (5) |
| C4—C3—C2 | 118.63 (7) | C12—C13—H13A | 109.5 |
| C8—C3—C2 | 120.95 (6) | C12—C13—H13B | 109.5 |
| C5—C4—C3 | 119.93 (7) | H13A—C13—H13B | 109.5 |
| C5—C4—H4A | 120.0 | C12—C13—H13C | 109.5 |
| C3—C4—H4A | 120.0 | H13A—C13—H13C | 109.5 |
| C4—C5—C6 | 119.74 (7) | H13B—C13—H13C | 109.5 |
| C4—C5—H5A | 120.1 | N1—C14—H14A | 109.5 |
| C6—C5—H5A | 120.1 | N1—C14—H14B | 109.5 |
| C7—C6—C5 | 120.57 (7) | H14A—C14—H14B | 109.5 |
| C7—C6—H6A | 119.7 | N1—C14—H14C | 109.5 |
| C5—C6—H6A | 119.7 | H14A—C14—H14C | 109.5 |
| C6—C7—C8 | 119.88 (7) | H14B—C14—H14C | 109.5 |
| C6—C7—H7A | 120.1 | O5—C15—H15A | 109.5 |
| C8—C7—H7A | 120.1 | O5—C15—H15B | 109.5 |
| C7—C8—C3 | 119.60 (7) | H15A—C15—H15B | 109.5 |
| C7—C8—C9 | 121.75 (6) | O5—C15—H15C | 109.5 |
| C3—C8—C9 | 118.62 (6) | H15A—C15—H15C | 109.5 |
| O3—C9—C8 | 112.58 (6) | H15B—C15—H15C | 109.5 |
| O3—C9—C1 | 111.58 (6) | C11—C16—H16A | 109.5 |
| C8—C9—C1 | 112.49 (6) | C11—C16—H16B | 109.5 |
| O3—C9—C12 | 90.22 (5) | H16A—C16—H16B | 109.5 |
| C8—C9—C12 | 116.44 (6) | C11—C16—H16C | 109.5 |
| C1—C9—C12 | 111.66 (6) | H16A—C16—H16C | 109.5 |
| O5—C10—O3 | 108.56 (6) | H16B—C16—H16C | 109.5 |
| C2—N1—C1—O1 | −161.40 (8) | O1—C1—C9—C12 | −81.94 (9) |
| C14—N1—C1—O1 | 6.68 (11) | N1—C1—C9—C12 | 93.26 (7) |
| C2—N1—C1—C9 | 23.35 (10) | C15—O5—C10—O3 | −173.45 (6) |
| C14—N1—C1—C9 | −168.56 (7) | C15—O5—C10—O4 | −49.51 (9) |
| C1—N1—C2—O2 | 178.82 (8) | C15—O5—C10—C12 | 78.38 (9) |
| C14—N1—C2—O2 | 10.86 (11) | C9—O3—C10—O5 | −126.97 (6) |
| C1—N1—C2—C3 | 3.52 (10) | C9—O3—C10—O4 | 109.41 (6) |
| C14—N1—C2—C3 | −164.44 (7) | C9—O3—C10—C12 | 2.15 (6) |
| O2—C2—C3—C4 | −12.66 (11) | C11—O4—C10—O5 | 142.09 (6) |
| N1—C2—C3—C4 | 162.54 (7) | C11—O4—C10—O3 | −95.97 (7) |
| O2—C2—C3—C8 | 171.75 (7) | C11—O4—C10—C12 | 3.77 (7) |
| N1—C2—C3—C8 | −13.05 (10) | C12—N2—C11—O4 | 0.91 (9) |
| C8—C3—C4—C5 | −0.74 (11) | C12—N2—C11—C16 | 179.69 (8) |
| C2—C3—C4—C5 | −176.36 (7) | C10—O4—C11—N2 | −3.21 (9) |
| C3—C4—C5—C6 | 0.27 (12) | C10—O4—C11—C16 | 177.86 (7) |
| C4—C5—C6—C7 | 0.53 (12) | C11—N2—C12—C13 | −132.59 (7) |
| C5—C6—C7—C8 | −0.85 (12) | C11—N2—C12—C10 | 1.60 (8) |
| C6—C7—C8—C3 | 0.38 (11) | C11—N2—C12—C9 | 90.33 (7) |
| C6—C7—C8—C9 | −177.87 (7) | O5—C10—C12—N2 | −133.99 (7) |
| C4—C3—C8—C7 | 0.41 (10) | O3—C10—C12—N2 | 110.46 (6) |
| C2—C3—C8—C7 | 175.93 (7) | O4—C10—C12—N2 | −3.35 (7) |
| C4—C3—C8—C9 | 178.71 (7) | O5—C10—C12—C13 | −4.83 (10) |
| C2—C3—C8—C9 | −5.77 (10) | O3—C10—C12—C13 | −120.39 (7) |
| C10—O3—C9—C8 | 116.84 (6) | O4—C10—C12—C13 | 125.81 (7) |
| C10—O3—C9—C1 | −115.57 (6) | O5—C10—C12—C9 | 113.59 (7) |
| C10—O3—C9—C12 | −2.09 (5) | O3—C10—C12—C9 | −1.97 (5) |
| C7—C8—C9—O3 | −23.21 (9) | O4—C10—C12—C9 | −115.78 (6) |
| C3—C8—C9—O3 | 158.52 (6) | O3—C9—C12—N2 | −101.04 (6) |
| C7—C8—C9—C1 | −150.32 (7) | C8—C9—C12—N2 | 143.45 (6) |
| C3—C8—C9—C1 | 31.42 (9) | C1—C9—C12—N2 | 12.37 (8) |
| C7—C8—C9—C12 | 78.99 (8) | O3—C9—C12—C13 | 124.09 (7) |
| C3—C8—C9—C12 | −99.28 (7) | C8—C9—C12—C13 | 8.58 (9) |
| O1—C1—C9—O3 | 17.35 (10) | C1—C9—C12—C13 | −122.51 (7) |
| N1—C1—C9—O3 | −167.44 (6) | O3—C9—C12—C10 | 1.92 (5) |
| O1—C1—C9—C8 | 144.99 (8) | C8—C9—C12—C10 | −113.59 (6) |
| N1—C1—C9—C8 | −39.81 (9) | C1—C9—C12—C10 | 115.32 (6) |