Literature DB >> 21754883

Methyl 4'-isobutyl-2,2'-dimethyl-1,3-dioxo-2,3-dihydro-1H,4'H-spiro-[iso-quinoline-4,5'-oxazole]-4'-carboxyl-ate.

Hoong-Kun Fun, Ching Kheng Quah, Kai Xu, Yan Zhang.   

Abstract

In the isoquinoline ring system of the title mol-ecule, C(19)H(22)N(2)O(5), the N-heterocyclic ring is in a half-boat conformation. The dioxa-2-aza-spiro ring is essentially planar [maximum deviation = 0.042 (1) Å] and forms a dihedral angle of 81.85 (4)° with the benzene ring. In the crystal, the mol-ecules are linked via inter-molecular C-H⋯O hydrogen bonds into chains along [010].

Entities:  

Year:  2011        PMID: 21754883      PMCID: PMC3120529          DOI: 10.1107/S1600536811019003

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to and the potential biological activity of the title compound, see: Pollers-Wieers et al. (1981 ▶); Malamas et al. (1994 ▶); Yu et al. (2010 ▶); Mitchell et al. (1995 ▶, 2000 ▶); Badillo et al. (2010 ▶); Wang et al. (2010 ▶); Nair et al. (2002 ▶); Huang et al. (2011 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶). For standard bond-length data, see: Allen et al. (1987 ▶). For ring conformations, see: Cremer & Pople (1975 ▶). For related structures, see: Fun et al. (2011a ▶,b ▶,c ▶,d ▶).

Experimental

Crystal data

C19H22N2O5 M = 358.39 Triclinic, a = 8.6764 (1) Å b = 8.9366 (1) Å c = 12.0684 (2) Å α = 93.495 (1)° β = 109.892 (1)° γ = 98.426 (1)° V = 864.22 (2) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 100 K 0.40 × 0.29 × 0.18 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.961, T max = 0.982 25638 measured reflections 6231 independent reflections 5381 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.113 S = 1.05 6231 reflections 240 parameters H-atom parameters constrained Δρmax = 0.46 e Å−3 Δρmin = −0.24 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811019003/rz2597sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811019003/rz2597Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811019003/rz2597Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H22N2O5Z = 2
Mr = 358.39F(000) = 380
Triclinic, P1Dx = 1.377 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.6764 (1) ÅCell parameters from 9993 reflections
b = 8.9366 (1) Åθ = 2.3–35.1°
c = 12.0684 (2) ŵ = 0.10 mm1
α = 93.495 (1)°T = 100 K
β = 109.892 (1)°Block, colourless
γ = 98.426 (1)°0.40 × 0.29 × 0.18 mm
V = 864.22 (2) Å3
Bruker SMART APEXII CCD area-detector diffractometer6231 independent reflections
Radiation source: fine-focus sealed tube5381 reflections with I > 2σ(I)
graphiteRint = 0.027
φ and ω scansθmax = 32.5°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −13→13
Tmin = 0.961, Tmax = 0.982k = −13→13
25638 measured reflectionsl = −16→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.113H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0637P)2 + 0.1577P] where P = (Fo2 + 2Fc2)/3
6231 reflections(Δ/σ)max = 0.001
240 parametersΔρmax = 0.46 e Å3
0 restraintsΔρmin = −0.24 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.56369 (10)−0.13923 (8)0.36689 (7)0.02808 (16)
O20.61673 (8)0.30662 (7)0.21139 (6)0.01906 (13)
O30.70178 (7)0.17637 (7)0.03819 (5)0.01584 (12)
O41.13223 (8)0.01941 (7)0.19476 (6)0.02001 (13)
O51.02241 (8)0.00373 (7)0.33903 (6)0.01843 (13)
N10.60176 (9)0.08767 (8)0.29574 (6)0.01547 (13)
N20.98015 (8)0.26379 (8)0.11623 (6)0.01398 (13)
C10.71382 (9)−0.05589 (9)0.12763 (7)0.01375 (14)
C20.75196 (10)−0.12948 (9)0.03755 (7)0.01669 (15)
H2A0.7913−0.0729−0.01260.020*
C30.73110 (11)−0.28759 (10)0.02283 (8)0.01903 (16)
H3A0.7556−0.3364−0.03780.023*
C40.67396 (11)−0.37359 (10)0.09800 (8)0.01860 (16)
H4A0.6621−0.47920.08840.022*
C50.63485 (10)−0.30090 (9)0.18736 (7)0.01695 (15)
H5A0.5961−0.35780.23760.020*
C60.65376 (10)−0.14210 (9)0.20173 (7)0.01444 (14)
C70.60524 (10)−0.06867 (10)0.29540 (7)0.01696 (15)
C80.64684 (9)0.17845 (9)0.21858 (7)0.01427 (14)
C90.74719 (9)0.11548 (9)0.15004 (7)0.01297 (13)
C100.94372 (9)0.18962 (9)0.21130 (7)0.01221 (13)
C110.84438 (10)0.25402 (9)0.02944 (7)0.01396 (14)
C120.81958 (11)0.31809 (10)−0.08488 (7)0.01760 (15)
H12A0.92260.3774−0.08230.026*
H12B0.73660.3818−0.09760.026*
H12C0.78340.2365−0.14860.026*
C130.98781 (9)0.30600 (9)0.32243 (7)0.01391 (14)
H13A0.93910.39500.29790.017*
H13B0.93620.26120.37530.017*
C141.17540 (9)0.35881 (9)0.39278 (7)0.01424 (14)
H14A1.22780.26820.40530.017*
C151.19883 (11)0.43954 (11)0.51412 (8)0.02220 (17)
H15A1.31560.46770.55970.033*
H15B1.14640.37230.55510.033*
H15C1.14920.52930.50390.033*
C161.26352 (11)0.46363 (11)0.32908 (8)0.02157 (17)
H16A1.37760.49800.37940.032*
H16B1.20910.54990.31100.032*
H16C1.25930.40890.25680.032*
C171.04488 (9)0.06210 (9)0.24456 (7)0.01415 (14)
C181.10003 (13)−0.12653 (12)0.37361 (10)0.0282 (2)
H18A1.0943−0.14920.44900.042*
H18B1.2145−0.10440.37980.042*
H18C1.0429−0.21270.31510.042*
C190.52591 (11)0.15905 (10)0.37250 (8)0.02020 (16)
H19A0.60160.24770.41980.030*
H19B0.50240.08780.42350.030*
H19C0.42430.18830.32430.030*
U11U22U33U12U13U23
O10.0440 (4)0.0228 (3)0.0276 (4)0.0051 (3)0.0250 (3)0.0085 (3)
O20.0179 (3)0.0170 (3)0.0230 (3)0.0048 (2)0.0072 (2)0.0034 (2)
O30.0145 (2)0.0189 (3)0.0129 (2)0.0007 (2)0.0035 (2)0.0058 (2)
O40.0199 (3)0.0196 (3)0.0222 (3)0.0068 (2)0.0083 (2)0.0017 (2)
O50.0200 (3)0.0176 (3)0.0172 (3)0.0030 (2)0.0053 (2)0.0072 (2)
N10.0155 (3)0.0164 (3)0.0166 (3)0.0018 (2)0.0087 (2)0.0016 (2)
N20.0163 (3)0.0142 (3)0.0129 (3)0.0018 (2)0.0071 (2)0.0031 (2)
C10.0132 (3)0.0142 (3)0.0124 (3)0.0001 (2)0.0037 (2)0.0014 (2)
C20.0182 (3)0.0171 (3)0.0141 (3)−0.0007 (3)0.0067 (3)0.0000 (3)
C30.0200 (4)0.0180 (4)0.0177 (4)0.0003 (3)0.0070 (3)−0.0026 (3)
C40.0186 (4)0.0141 (3)0.0204 (4)0.0007 (3)0.0047 (3)0.0002 (3)
C50.0171 (3)0.0153 (3)0.0170 (3)0.0005 (3)0.0048 (3)0.0039 (3)
C60.0141 (3)0.0152 (3)0.0133 (3)0.0007 (3)0.0045 (3)0.0021 (3)
C70.0185 (3)0.0176 (4)0.0161 (3)0.0015 (3)0.0083 (3)0.0031 (3)
C80.0115 (3)0.0163 (3)0.0144 (3)0.0009 (2)0.0044 (2)0.0022 (3)
C90.0130 (3)0.0140 (3)0.0115 (3)0.0010 (2)0.0042 (2)0.0030 (2)
C100.0122 (3)0.0130 (3)0.0117 (3)0.0016 (2)0.0048 (2)0.0021 (2)
C110.0173 (3)0.0121 (3)0.0136 (3)0.0020 (3)0.0071 (3)0.0022 (2)
C120.0227 (4)0.0172 (3)0.0137 (3)0.0033 (3)0.0070 (3)0.0048 (3)
C130.0127 (3)0.0157 (3)0.0129 (3)0.0015 (2)0.0048 (2)−0.0007 (3)
C140.0126 (3)0.0153 (3)0.0140 (3)0.0012 (2)0.0044 (2)0.0002 (3)
C150.0170 (4)0.0295 (4)0.0163 (4)−0.0015 (3)0.0046 (3)−0.0045 (3)
C160.0175 (4)0.0252 (4)0.0199 (4)−0.0029 (3)0.0065 (3)0.0034 (3)
C170.0137 (3)0.0130 (3)0.0135 (3)0.0005 (2)0.0028 (3)0.0014 (2)
C180.0264 (4)0.0233 (4)0.0332 (5)0.0066 (4)0.0054 (4)0.0157 (4)
C190.0194 (4)0.0222 (4)0.0224 (4)0.0029 (3)0.0126 (3)−0.0004 (3)
O1—C71.2178 (10)C9—C101.6262 (11)
O2—C81.2133 (10)C10—C171.5295 (11)
O3—C111.3675 (10)C10—C131.5462 (11)
O3—C91.4365 (9)C11—C121.4859 (11)
O4—C171.2033 (10)C12—H12A0.9600
O5—C171.3431 (10)C12—H12B0.9600
O5—C181.4424 (11)C12—H12C0.9600
N1—C81.3875 (10)C13—C141.5422 (11)
N1—C71.4016 (11)C13—H13A0.9700
N1—C191.4711 (11)C13—H13B0.9700
N2—C111.2694 (10)C14—C161.5268 (12)
N2—C101.4608 (10)C14—C151.5270 (12)
C1—C21.3948 (11)C14—H14A0.9800
C1—C61.3958 (11)C15—H15A0.9600
C1—C91.5062 (11)C15—H15B0.9600
C2—C31.3904 (12)C15—H15C0.9600
C2—H2A0.9300C16—H16A0.9600
C3—C41.3925 (12)C16—H16B0.9600
C3—H3A0.9300C16—H16C0.9600
C4—C51.3886 (12)C18—H18A0.9600
C4—H4A0.9300C18—H18B0.9600
C5—C61.3976 (11)C18—H18C0.9600
C5—H5A0.9300C19—H19A0.9600
C6—C71.4833 (12)C19—H19B0.9600
C8—C91.5284 (11)C19—H19C0.9600
C11—O3—C9107.44 (6)C11—C12—H12A109.5
C17—O5—C18115.39 (7)C11—C12—H12B109.5
C8—N1—C7124.82 (7)H12A—C12—H12B109.5
C8—N1—C19116.23 (7)C11—C12—H12C109.5
C7—N1—C19118.50 (7)H12A—C12—H12C109.5
C11—N2—C10108.20 (6)H12B—C12—H12C109.5
C2—C1—C6119.53 (7)C14—C13—C10115.65 (6)
C2—C1—C9120.39 (7)C14—C13—H13A108.4
C6—C1—C9119.97 (7)C10—C13—H13A108.4
C3—C2—C1119.87 (8)C14—C13—H13B108.4
C3—C2—H2A120.1C10—C13—H13B108.4
C1—C2—H2A120.1H13A—C13—H13B107.4
C2—C3—C4120.66 (8)C16—C14—C15109.57 (7)
C2—C3—H3A119.7C16—C14—C13113.42 (7)
C4—C3—H3A119.7C15—C14—C13109.33 (7)
C5—C4—C3119.68 (8)C16—C14—H14A108.1
C5—C4—H4A120.2C15—C14—H14A108.1
C3—C4—H4A120.2C13—C14—H14A108.1
C4—C5—C6119.92 (8)C14—C15—H15A109.5
C4—C5—H5A120.0C14—C15—H15B109.5
C6—C5—H5A120.0H15A—C15—H15B109.5
C1—C6—C5120.33 (8)C14—C15—H15C109.5
C1—C6—C7121.22 (7)H15A—C15—H15C109.5
C5—C6—C7118.43 (7)H15B—C15—H15C109.5
O1—C7—N1120.23 (8)C14—C16—H16A109.5
O1—C7—C6122.86 (8)C14—C16—H16B109.5
N1—C7—C6116.85 (7)H16A—C16—H16B109.5
O2—C8—N1121.17 (8)C14—C16—H16C109.5
O2—C8—C9121.21 (7)H16A—C16—H16C109.5
N1—C8—C9117.46 (7)H16B—C16—H16C109.5
O3—C9—C1109.04 (6)O4—C17—O5124.41 (7)
O3—C9—C8106.82 (6)O4—C17—C10125.85 (7)
C1—C9—C8113.48 (6)O5—C17—C10109.73 (7)
O3—C9—C10102.23 (6)O5—C18—H18A109.5
C1—C9—C10113.79 (6)O5—C18—H18B109.5
C8—C9—C10110.63 (6)H18A—C18—H18B109.5
N2—C10—C17110.09 (6)O5—C18—H18C109.5
N2—C10—C13110.48 (6)H18A—C18—H18C109.5
C17—C10—C13108.90 (6)H18B—C18—H18C109.5
N2—C10—C9103.04 (6)N1—C19—H19A109.5
C17—C10—C9109.24 (6)N1—C19—H19B109.5
C13—C10—C9114.95 (6)H19A—C19—H19B109.5
N2—C11—O3118.54 (7)N1—C19—H19C109.5
N2—C11—C12127.35 (7)H19A—C19—H19C109.5
O3—C11—C12114.11 (7)H19B—C19—H19C109.5
C6—C1—C2—C3−0.47 (12)O2—C8—C9—C1−156.00 (7)
C9—C1—C2—C3175.68 (7)N1—C8—C9—C128.49 (9)
C1—C2—C3—C4−0.65 (13)O2—C8—C9—C1074.70 (9)
C2—C3—C4—C51.05 (13)N1—C8—C9—C10−100.81 (8)
C3—C4—C5—C6−0.31 (12)C11—N2—C10—C17122.44 (7)
C2—C1—C6—C51.20 (12)C11—N2—C10—C13−117.25 (7)
C9—C1—C6—C5−174.97 (7)C11—N2—C10—C96.03 (8)
C2—C1—C6—C7−177.48 (7)O3—C9—C10—N2−7.21 (7)
C9—C1—C6—C76.35 (11)C1—C9—C10—N2110.20 (7)
C4—C5—C6—C1−0.81 (12)C8—C9—C10—N2−120.67 (7)
C4—C5—C6—C7177.91 (7)O3—C9—C10—C17−124.22 (6)
C8—N1—C7—O1179.82 (8)C1—C9—C10—C17−6.82 (9)
C19—N1—C7—O1−8.22 (12)C8—C9—C10—C17122.32 (7)
C8—N1—C7—C6−2.85 (12)O3—C9—C10—C13113.04 (7)
C19—N1—C7—C6169.11 (7)C1—C9—C10—C13−129.55 (7)
C1—C6—C7—O1−174.64 (8)C8—C9—C10—C13−0.41 (9)
C5—C6—C7—O16.66 (13)C10—N2—C11—O3−2.63 (10)
C1—C6—C7—N18.11 (11)C10—N2—C11—C12177.58 (8)
C5—C6—C7—N1−170.60 (7)C9—O3—C11—N2−2.67 (10)
C7—N1—C8—O2168.43 (8)C9—O3—C11—C12177.15 (7)
C19—N1—C8—O2−3.69 (11)N2—C10—C13—C14−72.97 (8)
C7—N1—C8—C9−16.05 (11)C17—C10—C13—C1448.05 (9)
C19—N1—C8—C9171.82 (7)C9—C10—C13—C14170.96 (6)
C11—O3—C9—C1−114.79 (7)C10—C13—C14—C1671.60 (9)
C11—O3—C9—C8122.21 (7)C10—C13—C14—C15−165.79 (7)
C11—O3—C9—C105.96 (8)C18—O5—C17—O4−5.16 (12)
C2—C1—C9—O340.97 (9)C18—O5—C17—C10174.99 (7)
C6—C1—C9—O3−142.90 (7)N2—C10—C17—O4−5.43 (11)
C2—C1—C9—C8159.89 (7)C13—C10—C17—O4−126.69 (8)
C6—C1—C9—C8−23.97 (10)C9—C10—C17—O4107.03 (9)
C2—C1—C9—C10−72.42 (9)N2—C10—C17—O5174.42 (6)
C6—C1—C9—C10103.71 (8)C13—C10—C17—O553.16 (8)
O2—C8—C9—O3−35.81 (10)C9—C10—C17—O5−73.12 (8)
N1—C8—C9—O3148.68 (7)
D—H···AD—HH···AD···AD—H···A
C2—H2A···O4i0.932.563.4353 (11)158
C4—H4A···O2ii0.932.563.2878 (11)136
C12—H12C···O4i0.962.593.3600 (11)138
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2A⋯O4i0.932.563.4353 (11)158
C4—H4A⋯O2ii0.932.563.2878 (11)136
C12—H12C⋯O4i0.962.593.3600 (11)138

Symmetry codes: (i) ; (ii) .

  10 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Photoinduced tandem reactions of isoquinoline-1,3,4-trione with alkynes to build aza-polycycles.

Authors:  Haitao Yu; Jinbo Li; Zhuangfei Kou; Xuewen Du; Yi Wei; Hoong-Kun Fun; Jianhua Xu; Yan Zhang
Journal:  J Org Chem       Date:  2010-05-07       Impact factor: 4.354

3.  Novel spirosuccinimide aldose reductase inhibitors derived from isoquinoline-1,3-diones: 2-[(4-bromo-2-fluorophenyl)methyl]-6- fluorospiro[isoquinoline-4(1H),3'-pyrrolidine]-1,2',3,5'(2H)-tetrone and congeners. 1.

Authors:  M S Malamas; T C Hohman; J Millen
Journal:  J Med Chem       Date:  1994-06-24       Impact factor: 7.446

4.  Facile synthesis of spiroisoquinolines based on photocycloaddition of isoquinoline-1,3,4-trione with oxazoles.

Authors:  Chengmei Huang; Haitao Yu; Zhengrui Miao; Jie Zhou; Shuai Wang; Hoong-Kun Fun; Jianhua Xu; Yan Zhang
Journal:  Org Biomol Chem       Date:  2011-04-06       Impact factor: 3.876

5.  Photoinduced [4 + 4], [4 + 2], and [2 + 2] cycloadditions of o-quinones with oxazoles: chemo-, regio-, and diastereoselectivity.

Authors:  Lei Wang; Yu-Cheng Huang; Yang Liu; Hoong-Kun Fun; Yan Zhang; Jian-Hua Xu
Journal:  J Org Chem       Date:  2010-10-28       Impact factor: 4.354

6.  (1S*,4'S*,5R*)-1-Isobutyl-5-meth-oxy-2',3-dimethyl-4,6-dioxa-2-aza-spiro-[bicyclo-[3.2.0]hept-2-ene-7,4'-isoquinoline]-1',3'(2'H,4'H)-dione.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Chengmei Huang; Haitao Yu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-29

7.  (1S*,4'S*,5R*)-1-Isopropyl-5-meth-oxy-2',3-dimethyl-4,6-dioxa-2-aza-spiro-[bicyclo-[3.2.0]hept-2-ene-7,4'-isoquinoline]-1',3'(2'H,4'H)-dione.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Chengmei Huang; Haitao Yu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-29

8.  5-Meth-oxy-1,2',3-trimethyl-4,6-dioxa-2-aza-spiro-[bicyclo-[3.2.0]hept-2-ene-7,4'-isoquinoline]-1',3'(2'H,4'H)-dione.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Chengmei Huang; Haitao Yu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-07

9.  1-Benzyl-5-meth-oxy-2',3-dimethyl-4,6-dioxa-2-aza-spiro-[bicyclo-[3.2.0]hept-2-ene-7,4'-isoquinoline]-1',3'(2'H,4'H)-dione.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Chengmei Huang; Haitao Yu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-07

10.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  10 in total

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