| Literature DB >> 21754447 |
Zhi-Nan Hu, Hui-Bin Yang, Huan Luo, Bin Li.
Abstract
In the title compound, C(5)H(5)ClN(2), a by-product in the synthesis of ethyl 2-(3-chloro-pyridin-2-yl)-5-oxopyrazolidine-3-carboxyl-ate, the amine groups form inter-molecular hydrogen-bonding associations with pyridine N-atom acceptors, giving centrosymmetric cyclic dimers. Short inter-molecular Cl⋯Cl inter-actions [3.278 (3) Å] also occur.Entities:
Year: 2011 PMID: 21754447 PMCID: PMC3089079 DOI: 10.1107/S1600536811013432
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H5ClN2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1473 reflections |
| θ = 3.7–27.2° | |
| µ = 0.52 mm−1 | |
| β = 90.581 (12)° | Block, yellow |
| 0.38 × 0.32 × 0.22 mm | |
| Bruker SMART CCD area-detector diffractometer | 1057 independent reflections |
| Radiation source: fine-focus sealed tube | 867 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.0°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 2778 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1057 reflections | (Δ/σ)max < 0.001 |
| 73 parameters | Δρmax = 0.57 e Å−3 |
| 0 restraints | Δρmin = −0.31 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.89884 (8) | 0.20978 (18) | 0.46576 (10) | 0.0821 (5) | |
| N1 | 0.6085 (2) | 0.5920 (5) | 0.3676 (2) | 0.0597 (7) | |
| N2 | 0.6357 (3) | 0.2720 (5) | 0.5172 (3) | 0.0716 (8) | |
| H2A | 0.5613 | 0.2836 | 0.5385 | 0.086* | |
| H2B | 0.6804 | 0.1628 | 0.5553 | 0.086* | |
| C1 | 0.6825 (2) | 0.4252 (5) | 0.4237 (3) | 0.0505 (7) | |
| C2 | 0.8035 (2) | 0.4167 (5) | 0.3855 (3) | 0.0535 (7) | |
| C3 | 0.8465 (3) | 0.5728 (6) | 0.2897 (3) | 0.0635 (8) | |
| H3 | 0.9266 | 0.5667 | 0.2645 | 0.076* | |
| C4 | 0.7692 (3) | 0.7404 (7) | 0.2306 (3) | 0.0725 (10) | |
| H4 | 0.7955 | 0.8481 | 0.1640 | 0.087* | |
| C5 | 0.6520 (3) | 0.7431 (6) | 0.2735 (4) | 0.0698 (9) | |
| H5 | 0.6000 | 0.8571 | 0.2345 | 0.084* |
| Cl1 | 0.0717 (7) | 0.0833 (7) | 0.0913 (8) | 0.0322 (4) | 0.0101 (5) | 0.0145 (4) |
| N1 | 0.0545 (13) | 0.0566 (14) | 0.0681 (15) | 0.0068 (11) | 0.0018 (10) | 0.0047 (11) |
| N2 | 0.0674 (16) | 0.0602 (16) | 0.088 (2) | 0.0131 (12) | 0.0194 (14) | 0.0196 (13) |
| C1 | 0.0572 (14) | 0.0411 (13) | 0.0533 (15) | 0.0036 (11) | 0.0026 (11) | −0.0039 (11) |
| C2 | 0.0558 (15) | 0.0510 (15) | 0.0537 (15) | 0.0099 (11) | 0.0019 (11) | −0.0057 (12) |
| C3 | 0.0561 (15) | 0.076 (2) | 0.0583 (17) | −0.0019 (14) | 0.0070 (13) | 0.0002 (14) |
| C4 | 0.077 (2) | 0.074 (2) | 0.067 (2) | −0.0049 (15) | 0.0047 (17) | 0.0178 (15) |
| C5 | 0.073 (2) | 0.0617 (19) | 0.074 (2) | 0.0057 (14) | −0.0054 (16) | 0.0155 (15) |
| Cl1—C2 | 1.735 (3) | C2—C3 | 1.361 (4) |
| N1—C5 | 1.334 (4) | C3—C4 | 1.380 (4) |
| N1—C1 | 1.344 (4) | C3—H3 | 0.9300 |
| N2—C1 | 1.351 (4) | C4—C5 | 1.378 (5) |
| N2—H2A | 0.8600 | C4—H4 | 0.9300 |
| N2—H2B | 0.8600 | C5—H5 | 0.9300 |
| C1—C2 | 1.405 (4) | ||
| C5—N1—C1 | 118.5 (3) | C2—C3—C4 | 118.9 (3) |
| C1—N2—H2A | 120.0 | C2—C3—H3 | 120.6 |
| C1—N2—H2B | 120.0 | C4—C3—H3 | 120.6 |
| H2A—N2—H2B | 120.0 | C5—C4—C3 | 117.9 (3) |
| N1—C1—N2 | 117.3 (3) | C5—C4—H4 | 121.0 |
| N1—C1—C2 | 120.0 (2) | C3—C4—H4 | 121.0 |
| N2—C1—C2 | 122.7 (2) | N1—C5—C4 | 124.0 (3) |
| C3—C2—C1 | 120.7 (3) | N1—C5—H5 | 118.0 |
| C3—C2—Cl1 | 120.2 (2) | C4—C5—H5 | 118.0 |
| C1—C2—Cl1 | 119.0 (2) | ||
| C5—N1—C1—N2 | −179.0 (3) | C1—C2—C3—C4 | 0.1 (5) |
| C5—N1—C1—C2 | 1.5 (4) | Cl1—C2—C3—C4 | −178.0 (2) |
| N1—C1—C2—C3 | −1.3 (4) | C2—C3—C4—C5 | 0.9 (5) |
| N2—C1—C2—C3 | 179.2 (3) | C1—N1—C5—C4 | −0.6 (5) |
| N1—C1—C2—Cl1 | 176.8 (2) | C3—C4—C5—N1 | −0.7 (5) |
| N2—C1—C2—Cl1 | −2.6 (4) |
| H··· | ||||
| N2—H2A···N1i | 0.86 | 2.22 | 3.051 (5) | 162 |
| N2—H2B···Cl1 | 0.86 | 2.61 | 3.001 (4) | 109 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.86 | 2.22 | 3.051 (5) | 162 |
Symmetry code: (i) .