Literature DB >> 21754173

6,8-Dichloro-N-methyl-3-nitro-4-nitro-methyl-4H-chromen-2-amine.

J Muthukumaran, A Parthiban, M Kannan, H Surya Prakash Rao, R Krishna.   

Abstract

In the title compound, C(11)H(9)Cl(2)N(3)O(5), the dihydro-pyran ring adopts a near-half-chair conformation. The benzene ring makes a torsion angle of 5.02 (5)° with the dihydro-pyran ring. Adjacent mol-ecules are inter-linked through inter-molecular C-H⋯O, N-H⋯O and C-Cl⋯π [3.4743 (9) Å] inter-actions. The inter-molecular N-H⋯O hydrogen bond generates an R(2) (2)(12) motif, which is observed to contribute to the crystal packing stability. Moreover, the mol-ecular structure displays an S(6) motif formed by intra-molecular N-H⋯O hydrogen bonding.

Entities:  

Year:  2011        PMID: 21754173      PMCID: PMC3099939          DOI: 10.1107/S1600536811009366

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Gayathri et al. (2006 ▶); Bhaskaran et al. (2006 ▶). For the biological importance of 4H-chromene derivatives, see: Cai (2007 ▶, 2008 ▶); Cai et al. (2006 ▶); Gabor (1988 ▶); Brooks (1998 ▶); Valenti et al. (1993 ▶); Hyana & Saimoto (1987 ▶); Tang et al. (2007 ▶). For ring-puckering analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C11H9Cl2N3O5 M = 334.11 Triclinic, a = 8.7426 (7) Å b = 9.2727 (7) Å c = 9.3420 (7) Å α = 70.017 (7)° β = 72.609 (7)° γ = 87.579 (6)° V = 677.68 (9) Å3 Z = 2 Mo Kα radiation μ = 0.50 mm−1 T = 293 K 0.4 × 0.35 × 0.2 mm

Data collection

Oxford Diffraction Xcalibur Eos diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.792, T max = 1.000 15150 measured reflections 2385 independent reflections 2072 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.110 S = 1.01 2385 reflections 191 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.30 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2009 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811009366/zq2089sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811009366/zq2089Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H9Cl2N3O5Z = 2
Mr = 334.11F(000) = 340
Triclinic, P1Dx = 1.637 Mg m3
Hall symbol: -P 1Melting point: 485.65 K
a = 8.7426 (7) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.2727 (7) ÅCell parameters from 8735 reflections
c = 9.3420 (7) Åθ = 2.7–29.2°
α = 70.017 (7)°µ = 0.50 mm1
β = 72.609 (7)°T = 293 K
γ = 87.579 (6)°Block, colourless
V = 677.68 (9) Å30.4 × 0.35 × 0.2 mm
Oxford Diffraction Xcalibur Eos diffractometer2385 independent reflections
Radiation source: fine-focus sealed tube2072 reflections with I > 2σ(I)
graphiteRint = 0.034
Detector resolution: 15.9821 pixels mm-1θmax = 25.0°, θmin = 2.7°
ω scansh = −10→10
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −11→11
Tmin = 0.792, Tmax = 1.000l = −11→11
15150 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.110H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.091P)2] where P = (Fo2 + 2Fc2)/3
2385 reflections(Δ/σ)max = 0.046
191 parametersΔρmax = 0.34 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.66030 (6)0.29149 (5)−0.00059 (6)0.04277 (19)
Cl20.68824 (8)0.83939 (6)−0.46350 (6)0.0599 (2)
O10.77375 (15)0.46548 (12)0.15081 (14)0.0344 (3)
C60.79885 (19)0.71693 (18)−0.05514 (19)0.0273 (4)
O31.02216 (15)0.86894 (13)0.20553 (15)0.0389 (3)
N20.98248 (17)0.72806 (15)0.25417 (16)0.0321 (3)
O21.01949 (18)0.63676 (15)0.37199 (16)0.0494 (4)
O40.55005 (17)0.69199 (16)0.26437 (17)0.0502 (4)
C10.7612 (2)0.55977 (18)0.00458 (19)0.0283 (4)
C50.7793 (2)0.80191 (19)−0.20214 (19)0.0312 (4)
H50.80460.9075−0.24500.037*
C70.8539 (2)0.79260 (17)0.04217 (19)0.0275 (4)
H70.95260.8554−0.02880.033*
N10.8653 (2)0.40896 (17)0.35814 (18)0.0383 (4)
H10.91390.43310.41520.046*
C30.6865 (2)0.5726 (2)−0.2272 (2)0.0365 (4)
H30.64980.5253−0.28500.044*
C80.8987 (2)0.67447 (18)0.17785 (19)0.0285 (4)
C20.7067 (2)0.48781 (19)−0.0813 (2)0.0316 (4)
C90.8488 (2)0.51877 (19)0.23183 (19)0.0298 (4)
N30.56967 (19)0.83127 (18)0.19612 (18)0.0373 (4)
C110.7329 (2)0.90325 (17)0.0935 (2)0.0326 (4)
H11A0.77590.95240.15100.039*
H11B0.72230.9831−0.00170.039*
C40.7221 (2)0.7293 (2)−0.2847 (2)0.0355 (4)
C100.8075 (3)0.2491 (2)0.4088 (3)0.0485 (5)
H10A0.85840.20780.32630.073*
H10B0.69320.24330.42870.073*
H10C0.83250.19090.50490.073*
O50.4625 (2)0.9172 (2)0.2075 (2)0.0744 (5)
U11U22U33U12U13U23
Cl10.0508 (3)0.0246 (3)0.0566 (3)−0.0001 (2)−0.0175 (2)−0.0172 (2)
Cl20.0942 (5)0.0534 (4)0.0365 (3)0.0011 (3)−0.0335 (3)−0.0086 (2)
O10.0450 (7)0.0202 (6)0.0367 (6)−0.0035 (5)−0.0182 (5)−0.0025 (5)
C60.0271 (8)0.0246 (8)0.0290 (8)0.0025 (6)−0.0077 (6)−0.0084 (6)
O30.0469 (8)0.0250 (7)0.0444 (7)−0.0074 (5)−0.0186 (6)−0.0064 (5)
N20.0362 (8)0.0250 (8)0.0314 (7)−0.0018 (6)−0.0139 (6)−0.0018 (6)
O20.0678 (10)0.0365 (8)0.0478 (8)−0.0027 (7)−0.0388 (7)−0.0004 (6)
O40.0407 (8)0.0409 (8)0.0602 (9)−0.0049 (6)−0.0082 (7)−0.0117 (7)
C10.0295 (9)0.0229 (8)0.0299 (8)0.0040 (6)−0.0083 (7)−0.0068 (6)
C50.0348 (9)0.0245 (9)0.0293 (8)0.0015 (7)−0.0071 (7)−0.0053 (7)
C70.0308 (9)0.0186 (8)0.0295 (8)−0.0006 (6)−0.0096 (7)−0.0030 (6)
N10.0483 (9)0.0252 (8)0.0387 (8)−0.0021 (6)−0.0221 (7)0.0006 (6)
C30.0392 (10)0.0387 (11)0.0383 (10)0.0041 (8)−0.0126 (8)−0.0208 (8)
C80.0309 (9)0.0229 (8)0.0307 (8)0.0002 (7)−0.0130 (7)−0.0044 (6)
C20.0309 (9)0.0238 (9)0.0401 (9)0.0028 (7)−0.0077 (7)−0.0136 (7)
C90.0296 (9)0.0248 (9)0.0322 (9)0.0021 (7)−0.0109 (7)−0.0050 (7)
N30.0405 (9)0.0388 (9)0.0378 (8)0.0085 (7)−0.0150 (7)−0.0177 (7)
C110.0397 (10)0.0210 (8)0.0383 (9)0.0022 (7)−0.0163 (7)−0.0078 (7)
C40.0409 (10)0.0369 (10)0.0277 (8)0.0045 (8)−0.0101 (7)−0.0106 (7)
C100.0579 (13)0.0245 (10)0.0514 (11)−0.0055 (9)−0.0192 (10)0.0047 (8)
O50.0539 (10)0.0656 (11)0.0901 (13)0.0263 (9)−0.0061 (9)−0.0262 (9)
Cl1—C21.7287 (16)C7—H70.9800
Cl2—C41.7391 (17)N1—C91.311 (2)
O1—C91.352 (2)N1—C101.455 (2)
O1—C11.3812 (19)N1—H10.8600
C6—C11.385 (2)C3—C21.381 (2)
C6—C51.388 (2)C3—C41.379 (2)
C6—C71.509 (2)C3—H30.9300
O3—N21.2537 (17)C8—C91.398 (2)
N2—O21.2593 (18)N3—O51.208 (2)
N2—C81.370 (2)N3—C111.492 (2)
O4—N31.222 (2)C11—H11A0.9700
C1—C21.392 (2)C11—H11B0.9700
C5—C41.383 (2)C10—H10A0.9600
C5—H50.9300C10—H10B0.9600
C7—C81.507 (2)C10—H10C0.9600
C7—C111.531 (2)
C9—O1—C1120.56 (13)N2—C8—C7116.78 (13)
C1—C6—C5118.53 (15)C9—C8—C7122.28 (14)
C1—C6—C7119.89 (14)C3—C2—C1120.45 (15)
C5—C6—C7121.54 (14)C3—C2—Cl1120.48 (13)
O3—N2—O2120.24 (13)C1—C2—Cl1119.04 (13)
O3—N2—C8119.38 (12)N1—C9—O1111.86 (15)
O2—N2—C8120.38 (13)N1—C9—C8127.76 (16)
O1—C1—C6123.02 (14)O1—C9—C8120.38 (14)
O1—C1—C2116.01 (14)O5—N3—O4123.38 (17)
C6—C1—C2120.97 (15)O5—N3—C11116.64 (16)
C4—C5—C6119.86 (15)O4—N3—C11119.98 (14)
C4—C5—H5120.1N3—C11—C7115.17 (13)
C6—C5—H5120.1N3—C11—H11A108.5
C8—C7—C6110.98 (13)C7—C11—H11A108.5
C8—C7—C11114.16 (13)N3—C11—H11B108.5
C6—C7—C11111.64 (13)C7—C11—H11B108.5
C8—C7—H7106.5H11A—C11—H11B107.5
C6—C7—H7106.5C3—C4—C5121.98 (15)
C11—C7—H7106.5C3—C4—Cl2118.91 (13)
C9—N1—C10124.73 (17)C5—C4—Cl2119.08 (13)
C9—N1—H1117.6N1—C10—H10A109.5
C10—N1—H1117.6N1—C10—H10B109.5
C2—C3—C4118.19 (15)H10A—C10—H10B109.5
C2—C3—H3120.9N1—C10—H10C109.5
C4—C3—H3120.9H10A—C10—H10C109.5
N2—C8—C9120.80 (14)H10B—C10—H10C109.5
C9—O1—C1—C6−10.9 (2)C4—C3—C2—Cl1178.69 (13)
C9—O1—C1—C2169.50 (14)O1—C1—C2—C3178.49 (15)
C5—C6—C1—O1−178.84 (15)C6—C1—C2—C3−1.1 (2)
C7—C6—C1—O1−1.1 (2)O1—C1—C2—Cl10.0 (2)
C5—C6—C1—C20.8 (2)C6—C1—C2—Cl1−179.62 (13)
C7—C6—C1—C2178.55 (15)C10—N1—C9—O1−1.3 (3)
C1—C6—C5—C40.5 (2)C10—N1—C9—C8178.82 (18)
C7—C6—C5—C4−177.25 (15)C1—O1—C9—N1−172.63 (14)
C1—C6—C7—C814.2 (2)C1—O1—C9—C87.2 (2)
C5—C6—C7—C8−168.08 (15)N2—C8—C9—N13.4 (3)
C1—C6—C7—C11−114.39 (16)C7—C8—C9—N1−172.13 (17)
C5—C6—C7—C1163.3 (2)N2—C8—C9—O1−176.45 (15)
O3—N2—C8—C9−178.20 (15)C7—C8—C9—O18.0 (2)
O2—N2—C8—C91.9 (2)O5—N3—C11—C7−163.02 (15)
O3—N2—C8—C7−2.4 (2)O4—N3—C11—C717.5 (2)
O2—N2—C8—C7177.65 (15)C8—C7—C11—N3−65.94 (19)
C6—C7—C8—N2166.39 (14)C6—C7—C11—N360.95 (17)
C11—C7—C8—N2−66.4 (2)C2—C3—C4—C51.1 (3)
C6—C7—C8—C9−17.9 (2)C2—C3—C4—Cl2−176.92 (14)
C11—C7—C8—C9109.33 (17)C6—C5—C4—C3−1.4 (3)
C4—C3—C2—C10.2 (3)C6—C5—C4—Cl2176.55 (13)
D—H···AD—HH···AD···AD—H···A
N1—H1···O20.862.002.613 (2)128
N1—H1···O2i0.862.122.881 (2)147
C7—H7···O3ii0.982.503.1944 (19)128
C11—H11B···O3ii0.972.543.103 (2)117
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O20.862.002.613 (2)128
N1—H1⋯O2i0.862.122.881 (2)147
C7—H7⋯O3ii0.982.503.1944 (19)128
C11—H11B⋯O3ii0.972.543.103 (2)117

Symmetry codes: (i) ; (ii) .

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