| Literature DB >> 21754173 |
J Muthukumaran, A Parthiban, M Kannan, H Surya Prakash Rao, R Krishna.
Abstract
In the title compound, C(11)H(9)Cl(2)N(3)O(5), the dihydro-pyran ring adopts a near-half-chair conformation. The benzene ring makes a torsion angle of 5.02 (5)° with the dihydro-pyran ring. Adjacent mol-ecules are inter-linked through inter-molecular C-H⋯O, N-H⋯O and C-Cl⋯π [3.4743 (9) Å] inter-actions. The inter-molecular N-H⋯O hydrogen bond generates an R(2) (2)(12) motif, which is observed to contribute to the crystal packing stability. Moreover, the mol-ecular structure displays an S(6) motif formed by intra-molecular N-H⋯O hydrogen bonding.Entities:
Year: 2011 PMID: 21754173 PMCID: PMC3099939 DOI: 10.1107/S1600536811009366
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H9Cl2N3O5 | |
| Triclinic, | |
| Hall symbol: -P 1 | Melting point: 485.65 K |
| Mo | |
| Cell parameters from 8735 reflections | |
| θ = 2.7–29.2° | |
| α = 70.017 (7)° | µ = 0.50 mm−1 |
| β = 72.609 (7)° | |
| γ = 87.579 (6)° | Block, colourless |
| 0.4 × 0.35 × 0.2 mm |
| Oxford Diffraction Xcalibur Eos diffractometer | 2385 independent reflections |
| Radiation source: fine-focus sealed tube | 2072 reflections with |
| graphite | |
| Detector resolution: 15.9821 pixels mm-1 | θmax = 25.0°, θmin = 2.7° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 15150 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2385 reflections | (Δ/σ)max = 0.046 |
| 191 parameters | Δρmax = 0.34 e Å−3 |
| 0 restraints | Δρmin = −0.30 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.66030 (6) | 0.29149 (5) | −0.00059 (6) | 0.04277 (19) | |
| Cl2 | 0.68824 (8) | 0.83939 (6) | −0.46350 (6) | 0.0599 (2) | |
| O1 | 0.77375 (15) | 0.46548 (12) | 0.15081 (14) | 0.0344 (3) | |
| C6 | 0.79885 (19) | 0.71693 (18) | −0.05514 (19) | 0.0273 (4) | |
| O3 | 1.02216 (15) | 0.86894 (13) | 0.20553 (15) | 0.0389 (3) | |
| N2 | 0.98248 (17) | 0.72806 (15) | 0.25417 (16) | 0.0321 (3) | |
| O2 | 1.01949 (18) | 0.63676 (15) | 0.37199 (16) | 0.0494 (4) | |
| O4 | 0.55005 (17) | 0.69199 (16) | 0.26437 (17) | 0.0502 (4) | |
| C1 | 0.7612 (2) | 0.55977 (18) | 0.00458 (19) | 0.0283 (4) | |
| C5 | 0.7793 (2) | 0.80191 (19) | −0.20214 (19) | 0.0312 (4) | |
| H5 | 0.8046 | 0.9075 | −0.2450 | 0.037* | |
| C7 | 0.8539 (2) | 0.79260 (17) | 0.04217 (19) | 0.0275 (4) | |
| H7 | 0.9526 | 0.8554 | −0.0288 | 0.033* | |
| N1 | 0.8653 (2) | 0.40896 (17) | 0.35814 (18) | 0.0383 (4) | |
| H1 | 0.9139 | 0.4331 | 0.4152 | 0.046* | |
| C3 | 0.6865 (2) | 0.5726 (2) | −0.2272 (2) | 0.0365 (4) | |
| H3 | 0.6498 | 0.5253 | −0.2850 | 0.044* | |
| C8 | 0.8987 (2) | 0.67447 (18) | 0.17785 (19) | 0.0285 (4) | |
| C2 | 0.7067 (2) | 0.48781 (19) | −0.0813 (2) | 0.0316 (4) | |
| C9 | 0.8488 (2) | 0.51877 (19) | 0.23183 (19) | 0.0298 (4) | |
| N3 | 0.56967 (19) | 0.83127 (18) | 0.19612 (18) | 0.0373 (4) | |
| C11 | 0.7329 (2) | 0.90325 (17) | 0.0935 (2) | 0.0326 (4) | |
| H11A | 0.7759 | 0.9524 | 0.1510 | 0.039* | |
| H11B | 0.7223 | 0.9831 | −0.0017 | 0.039* | |
| C4 | 0.7221 (2) | 0.7293 (2) | −0.2847 (2) | 0.0355 (4) | |
| C10 | 0.8075 (3) | 0.2491 (2) | 0.4088 (3) | 0.0485 (5) | |
| H10A | 0.8584 | 0.2078 | 0.3263 | 0.073* | |
| H10B | 0.6932 | 0.2433 | 0.4287 | 0.073* | |
| H10C | 0.8325 | 0.1909 | 0.5049 | 0.073* | |
| O5 | 0.4625 (2) | 0.9172 (2) | 0.2075 (2) | 0.0744 (5) |
| Cl1 | 0.0508 (3) | 0.0246 (3) | 0.0566 (3) | −0.0001 (2) | −0.0175 (2) | −0.0172 (2) |
| Cl2 | 0.0942 (5) | 0.0534 (4) | 0.0365 (3) | 0.0011 (3) | −0.0335 (3) | −0.0086 (2) |
| O1 | 0.0450 (7) | 0.0202 (6) | 0.0367 (6) | −0.0035 (5) | −0.0182 (5) | −0.0025 (5) |
| C6 | 0.0271 (8) | 0.0246 (8) | 0.0290 (8) | 0.0025 (6) | −0.0077 (6) | −0.0084 (6) |
| O3 | 0.0469 (8) | 0.0250 (7) | 0.0444 (7) | −0.0074 (5) | −0.0186 (6) | −0.0064 (5) |
| N2 | 0.0362 (8) | 0.0250 (8) | 0.0314 (7) | −0.0018 (6) | −0.0139 (6) | −0.0018 (6) |
| O2 | 0.0678 (10) | 0.0365 (8) | 0.0478 (8) | −0.0027 (7) | −0.0388 (7) | −0.0004 (6) |
| O4 | 0.0407 (8) | 0.0409 (8) | 0.0602 (9) | −0.0049 (6) | −0.0082 (7) | −0.0117 (7) |
| C1 | 0.0295 (9) | 0.0229 (8) | 0.0299 (8) | 0.0040 (6) | −0.0083 (7) | −0.0068 (6) |
| C5 | 0.0348 (9) | 0.0245 (9) | 0.0293 (8) | 0.0015 (7) | −0.0071 (7) | −0.0053 (7) |
| C7 | 0.0308 (9) | 0.0186 (8) | 0.0295 (8) | −0.0006 (6) | −0.0096 (7) | −0.0030 (6) |
| N1 | 0.0483 (9) | 0.0252 (8) | 0.0387 (8) | −0.0021 (6) | −0.0221 (7) | 0.0006 (6) |
| C3 | 0.0392 (10) | 0.0387 (11) | 0.0383 (10) | 0.0041 (8) | −0.0126 (8) | −0.0208 (8) |
| C8 | 0.0309 (9) | 0.0229 (8) | 0.0307 (8) | 0.0002 (7) | −0.0130 (7) | −0.0044 (6) |
| C2 | 0.0309 (9) | 0.0238 (9) | 0.0401 (9) | 0.0028 (7) | −0.0077 (7) | −0.0136 (7) |
| C9 | 0.0296 (9) | 0.0248 (9) | 0.0322 (9) | 0.0021 (7) | −0.0109 (7) | −0.0050 (7) |
| N3 | 0.0405 (9) | 0.0388 (9) | 0.0378 (8) | 0.0085 (7) | −0.0150 (7) | −0.0177 (7) |
| C11 | 0.0397 (10) | 0.0210 (8) | 0.0383 (9) | 0.0022 (7) | −0.0163 (7) | −0.0078 (7) |
| C4 | 0.0409 (10) | 0.0369 (10) | 0.0277 (8) | 0.0045 (8) | −0.0101 (7) | −0.0106 (7) |
| C10 | 0.0579 (13) | 0.0245 (10) | 0.0514 (11) | −0.0055 (9) | −0.0192 (10) | 0.0047 (8) |
| O5 | 0.0539 (10) | 0.0656 (11) | 0.0901 (13) | 0.0263 (9) | −0.0061 (9) | −0.0262 (9) |
| Cl1—C2 | 1.7287 (16) | C7—H7 | 0.9800 |
| Cl2—C4 | 1.7391 (17) | N1—C9 | 1.311 (2) |
| O1—C9 | 1.352 (2) | N1—C10 | 1.455 (2) |
| O1—C1 | 1.3812 (19) | N1—H1 | 0.8600 |
| C6—C1 | 1.385 (2) | C3—C2 | 1.381 (2) |
| C6—C5 | 1.388 (2) | C3—C4 | 1.379 (2) |
| C6—C7 | 1.509 (2) | C3—H3 | 0.9300 |
| O3—N2 | 1.2537 (17) | C8—C9 | 1.398 (2) |
| N2—O2 | 1.2593 (18) | N3—O5 | 1.208 (2) |
| N2—C8 | 1.370 (2) | N3—C11 | 1.492 (2) |
| O4—N3 | 1.222 (2) | C11—H11A | 0.9700 |
| C1—C2 | 1.392 (2) | C11—H11B | 0.9700 |
| C5—C4 | 1.383 (2) | C10—H10A | 0.9600 |
| C5—H5 | 0.9300 | C10—H10B | 0.9600 |
| C7—C8 | 1.507 (2) | C10—H10C | 0.9600 |
| C7—C11 | 1.531 (2) | ||
| C9—O1—C1 | 120.56 (13) | N2—C8—C7 | 116.78 (13) |
| C1—C6—C5 | 118.53 (15) | C9—C8—C7 | 122.28 (14) |
| C1—C6—C7 | 119.89 (14) | C3—C2—C1 | 120.45 (15) |
| C5—C6—C7 | 121.54 (14) | C3—C2—Cl1 | 120.48 (13) |
| O3—N2—O2 | 120.24 (13) | C1—C2—Cl1 | 119.04 (13) |
| O3—N2—C8 | 119.38 (12) | N1—C9—O1 | 111.86 (15) |
| O2—N2—C8 | 120.38 (13) | N1—C9—C8 | 127.76 (16) |
| O1—C1—C6 | 123.02 (14) | O1—C9—C8 | 120.38 (14) |
| O1—C1—C2 | 116.01 (14) | O5—N3—O4 | 123.38 (17) |
| C6—C1—C2 | 120.97 (15) | O5—N3—C11 | 116.64 (16) |
| C4—C5—C6 | 119.86 (15) | O4—N3—C11 | 119.98 (14) |
| C4—C5—H5 | 120.1 | N3—C11—C7 | 115.17 (13) |
| C6—C5—H5 | 120.1 | N3—C11—H11A | 108.5 |
| C8—C7—C6 | 110.98 (13) | C7—C11—H11A | 108.5 |
| C8—C7—C11 | 114.16 (13) | N3—C11—H11B | 108.5 |
| C6—C7—C11 | 111.64 (13) | C7—C11—H11B | 108.5 |
| C8—C7—H7 | 106.5 | H11A—C11—H11B | 107.5 |
| C6—C7—H7 | 106.5 | C3—C4—C5 | 121.98 (15) |
| C11—C7—H7 | 106.5 | C3—C4—Cl2 | 118.91 (13) |
| C9—N1—C10 | 124.73 (17) | C5—C4—Cl2 | 119.08 (13) |
| C9—N1—H1 | 117.6 | N1—C10—H10A | 109.5 |
| C10—N1—H1 | 117.6 | N1—C10—H10B | 109.5 |
| C2—C3—C4 | 118.19 (15) | H10A—C10—H10B | 109.5 |
| C2—C3—H3 | 120.9 | N1—C10—H10C | 109.5 |
| C4—C3—H3 | 120.9 | H10A—C10—H10C | 109.5 |
| N2—C8—C9 | 120.80 (14) | H10B—C10—H10C | 109.5 |
| C9—O1—C1—C6 | −10.9 (2) | C4—C3—C2—Cl1 | 178.69 (13) |
| C9—O1—C1—C2 | 169.50 (14) | O1—C1—C2—C3 | 178.49 (15) |
| C5—C6—C1—O1 | −178.84 (15) | C6—C1—C2—C3 | −1.1 (2) |
| C7—C6—C1—O1 | −1.1 (2) | O1—C1—C2—Cl1 | 0.0 (2) |
| C5—C6—C1—C2 | 0.8 (2) | C6—C1—C2—Cl1 | −179.62 (13) |
| C7—C6—C1—C2 | 178.55 (15) | C10—N1—C9—O1 | −1.3 (3) |
| C1—C6—C5—C4 | 0.5 (2) | C10—N1—C9—C8 | 178.82 (18) |
| C7—C6—C5—C4 | −177.25 (15) | C1—O1—C9—N1 | −172.63 (14) |
| C1—C6—C7—C8 | 14.2 (2) | C1—O1—C9—C8 | 7.2 (2) |
| C5—C6—C7—C8 | −168.08 (15) | N2—C8—C9—N1 | 3.4 (3) |
| C1—C6—C7—C11 | −114.39 (16) | C7—C8—C9—N1 | −172.13 (17) |
| C5—C6—C7—C11 | 63.3 (2) | N2—C8—C9—O1 | −176.45 (15) |
| O3—N2—C8—C9 | −178.20 (15) | C7—C8—C9—O1 | 8.0 (2) |
| O2—N2—C8—C9 | 1.9 (2) | O5—N3—C11—C7 | −163.02 (15) |
| O3—N2—C8—C7 | −2.4 (2) | O4—N3—C11—C7 | 17.5 (2) |
| O2—N2—C8—C7 | 177.65 (15) | C8—C7—C11—N3 | −65.94 (19) |
| C6—C7—C8—N2 | 166.39 (14) | C6—C7—C11—N3 | 60.95 (17) |
| C11—C7—C8—N2 | −66.4 (2) | C2—C3—C4—C5 | 1.1 (3) |
| C6—C7—C8—C9 | −17.9 (2) | C2—C3—C4—Cl2 | −176.92 (14) |
| C11—C7—C8—C9 | 109.33 (17) | C6—C5—C4—C3 | −1.4 (3) |
| C4—C3—C2—C1 | 0.2 (3) | C6—C5—C4—Cl2 | 176.55 (13) |
| H··· | ||||
| N1—H1···O2 | 0.86 | 2.00 | 2.613 (2) | 128 |
| N1—H1···O2i | 0.86 | 2.12 | 2.881 (2) | 147 |
| C7—H7···O3ii | 0.98 | 2.50 | 3.1944 (19) | 128 |
| C11—H11B···O3ii | 0.97 | 2.54 | 3.103 (2) | 117 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O2 | 0.86 | 2.00 | 2.613 (2) | 128 |
| N1—H1⋯O2i | 0.86 | 2.12 | 2.881 (2) | 147 |
| C7—H7⋯O3ii | 0.98 | 2.50 | 3.1944 (19) | 128 |
| C11—H11 | 0.97 | 2.54 | 3.103 (2) | 117 |
Symmetry codes: (i) ; (ii) .