Literature DB >> 21754083

5-Amino-2,4,6-triiodo-isophthalic acid-4,4'-bipyridine N,N'-dioxide-water (1/1/1).

Kou-Lin Zhang, Jin-Bo Zhang, Seik Weng Ng.   

Abstract

The aromatic rings of the N,N'-dioxide molecule in the title compound, C(8)H(4)NI(3)O(4)·C(10)H(8)N(2)O(2)·H(2)O, are twisted by 14.0 (2)°. The -CO(2)H substituents of the 5-amino-2,4,6-triiodo-isophthalic acid are twisted by 83.0 (2) and 86.5 (2)° out of the plane of the aromatic ring. In the crystal, the three components are linked by O-H⋯O hydrogen bonds into a three-dimensional network. An N-H⋯O inter-action also occurs. One of the amino H atom is not involved in hydrogen bonding.

Entities:  

Year:  2011        PMID: 21754083      PMCID: PMC3099751          DOI: 10.1107/S1600536811007276

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of the monohydrated carb­oxy­lic acid, see: Beck & Sheldrick (2008 ▶). For the 4,4′-bipyridinium 5-amino-2,4,6-triiodo­isophthalate co-crystal of carb­oxy­lic acid, see: Zhang et al. (2010 ▶).

Experimental

Crystal data

C8H4NI3O4·C10H8N2O2·H2O M = 765.02 Monoclinic, a = 7.5000 (2) Å b = 17.0808 (4) Å c = 16.523 (3) Å β = 94.349 (2)° V = 2110.6 (4) Å3 Z = 4 Mo Kα radiation μ = 4.49 mm−1 T = 100 K 0.20 × 0.05 × 0.05 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010 ▶) T min = 0.467, T max = 0.807 10861 measured reflections 4660 independent reflections 4112 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.068 S = 1.04 4660 reflections 304 parameters 6 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.73 e Å−3 Δρmin = −0.97 e Å−3 Data collection: CrysAlis PRO (Agilent, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811007276/bt5482sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811007276/bt5482Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H4NI3O4·C10H8N2O2·H2OF(000) = 1432
Mr = 765.02Dx = 2.408 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 5995 reflections
a = 7.5000 (2) Åθ = 2.4–29.2°
b = 17.0808 (4) ŵ = 4.49 mm1
c = 16.523 (3) ÅT = 100 K
β = 94.349 (2)°Prism, yellow
V = 2110.6 (4) Å30.20 × 0.05 × 0.05 mm
Z = 4
Agilent SuperNova Dual diffractometer with an Atlas detector4660 independent reflections
Radiation source: SuperNova (Mo) X-ray Source4112 reflections with I > 2σ(I)
MirrorRint = 0.032
Detector resolution: 10.4041 pixels mm-1θmax = 27.5°, θmin = 2.4°
ω scansh = −9→9
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010)k = −16→21
Tmin = 0.467, Tmax = 0.807l = −21→21
10861 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.068H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0304P)2] where P = (Fo2 + 2Fc2)/3
4660 reflections(Δ/σ)max = 0.001
304 parametersΔρmax = 0.73 e Å3
6 restraintsΔρmin = −0.97 e Å3
xyzUiso*/Ueq
I10.32943 (3)0.507910 (15)0.632563 (14)0.01280 (8)
I20.05617 (3)0.779896 (16)0.826265 (14)0.01348 (8)
I30.05801 (3)0.802046 (16)0.463723 (14)0.01291 (8)
O10.0967 (4)0.57411 (17)0.81306 (15)0.0145 (6)
O20.3866 (4)0.60594 (16)0.82653 (15)0.0139 (6)
O30.1102 (4)0.59971 (17)0.45040 (15)0.0140 (6)
O40.3967 (4)0.63963 (17)0.46318 (15)0.0158 (6)
O50.3523 (4)0.98110 (17)0.57244 (15)0.0171 (6)
O60.8488 (4)0.46621 (17)0.67957 (15)0.0165 (6)
O1W0.6478 (5)0.49085 (19)0.91589 (18)0.0215 (7)
N10.0344 (5)0.8521 (2)0.64989 (18)0.0164 (8)
N20.4406 (4)0.9148 (2)0.59092 (18)0.0134 (7)
N30.8019 (4)0.5409 (2)0.66729 (18)0.0126 (7)
C10.2386 (5)0.6091 (2)0.7914 (2)0.0111 (8)
C20.2034 (5)0.6574 (2)0.7142 (2)0.0112 (8)
C30.1342 (5)0.7325 (2)0.7169 (2)0.0099 (8)
C40.0991 (5)0.7782 (2)0.6459 (2)0.0109 (8)
C50.1361 (5)0.7429 (2)0.5724 (2)0.0105 (8)
C60.2090 (5)0.6682 (2)0.5683 (2)0.0105 (8)
C70.2412 (5)0.6246 (2)0.6397 (2)0.0098 (8)
C80.2487 (5)0.6338 (2)0.4873 (2)0.0119 (8)
C90.4693 (5)0.8909 (3)0.6689 (2)0.0145 (9)
H90.43140.92250.71160.017*
C100.5527 (6)0.8211 (2)0.6861 (2)0.0149 (9)
H100.57460.80570.74120.018*
C110.6067 (5)0.7718 (2)0.6253 (2)0.0117 (8)
C120.5799 (5)0.8009 (2)0.5456 (2)0.0129 (8)
H12A0.62000.77120.50190.016*
C130.4974 (5)0.8712 (2)0.5301 (2)0.0144 (8)
H130.47980.88940.47570.017*
C140.7350 (5)0.5812 (2)0.7277 (2)0.0123 (8)
H140.72750.55700.77910.015*
C150.6778 (5)0.6564 (2)0.7165 (2)0.0130 (8)
H150.63330.68410.76060.016*
C160.6833 (5)0.6936 (2)0.6412 (2)0.0133 (8)
C170.7574 (5)0.6498 (2)0.5799 (2)0.0127 (8)
H170.76610.67260.52790.015*
C180.8169 (5)0.5751 (2)0.5935 (2)0.0130 (8)
H180.86880.54690.55160.016*
H10.121 (7)0.543 (2)0.852 (2)0.038 (16)*
H30.130 (8)0.582 (3)0.4044 (17)0.06 (2)*
H1W10.563 (5)0.523 (2)0.907 (3)0.031 (15)*
H1W20.694 (6)0.505 (3)0.9614 (14)0.026 (14)*
H11−0.016 (6)0.877 (2)0.6082 (18)0.023 (13)*
H12−0.008 (6)0.870 (3)0.6942 (16)0.029 (13)*
U11U22U33U12U13U23
I10.01590 (14)0.00943 (15)0.01275 (13)0.00111 (10)−0.00109 (10)−0.00108 (10)
I20.01938 (15)0.01238 (15)0.00890 (12)0.00079 (11)0.00256 (10)−0.00099 (10)
I30.01642 (14)0.01286 (15)0.00930 (12)0.00009 (11)−0.00009 (10)0.00293 (10)
O10.0152 (15)0.0146 (16)0.0137 (13)−0.0024 (12)0.0007 (11)0.0074 (12)
O20.0138 (15)0.0163 (16)0.0112 (12)0.0002 (12)−0.0024 (11)0.0021 (12)
O30.0166 (15)0.0146 (16)0.0105 (13)−0.0011 (12)−0.0015 (11)−0.0046 (12)
O40.0153 (15)0.0192 (17)0.0135 (13)0.0012 (13)0.0053 (11)0.0015 (12)
O50.0252 (17)0.0114 (16)0.0140 (13)0.0066 (13)−0.0029 (12)−0.0030 (12)
O60.0256 (17)0.0105 (15)0.0131 (13)0.0048 (13)0.0001 (12)−0.0012 (12)
O1W0.0281 (19)0.0166 (18)0.0185 (15)0.0011 (15)−0.0061 (14)−0.0044 (13)
N10.025 (2)0.014 (2)0.0102 (16)0.0045 (16)0.0026 (15)0.0014 (15)
N20.0162 (18)0.0109 (19)0.0130 (15)−0.0011 (14)0.0001 (13)−0.0032 (14)
N30.0123 (17)0.0139 (19)0.0117 (15)0.0012 (14)0.0007 (13)−0.0001 (14)
C10.020 (2)0.009 (2)0.0052 (16)−0.0004 (17)0.0029 (15)−0.0027 (15)
C20.0104 (19)0.012 (2)0.0104 (17)−0.0018 (16)−0.0024 (14)−0.0001 (15)
C30.0112 (19)0.011 (2)0.0080 (16)−0.0031 (16)0.0021 (14)−0.0052 (15)
C40.0080 (19)0.011 (2)0.0134 (18)−0.0018 (16)−0.0006 (14)−0.0013 (15)
C50.013 (2)0.013 (2)0.0055 (16)−0.0021 (16)−0.0017 (14)0.0029 (15)
C60.0103 (19)0.011 (2)0.0102 (17)−0.0017 (16)0.0004 (14)0.0003 (15)
C70.0083 (19)0.008 (2)0.0134 (17)0.0020 (15)0.0000 (14)0.0006 (15)
C80.018 (2)0.008 (2)0.0098 (17)0.0039 (17)−0.0009 (15)0.0059 (15)
C90.016 (2)0.016 (2)0.0114 (17)0.0011 (17)−0.0027 (15)−0.0044 (16)
C100.021 (2)0.015 (2)0.0082 (17)−0.0017 (18)0.0001 (15)−0.0001 (16)
C110.0058 (18)0.015 (2)0.0142 (18)−0.0047 (16)0.0001 (14)−0.0012 (16)
C120.013 (2)0.013 (2)0.0125 (18)−0.0043 (17)0.0006 (15)−0.0046 (16)
C130.016 (2)0.015 (2)0.0121 (17)−0.0024 (18)0.0012 (15)−0.0024 (16)
C140.0111 (19)0.017 (2)0.0082 (17)−0.0022 (17)0.0008 (14)−0.0036 (16)
C150.013 (2)0.013 (2)0.0124 (17)−0.0029 (17)0.0011 (15)−0.0031 (16)
C160.010 (2)0.017 (2)0.0131 (18)−0.0032 (17)−0.0002 (15)−0.0033 (16)
C170.0102 (19)0.017 (2)0.0106 (17)−0.0027 (17)0.0017 (14)−0.0011 (16)
C180.0089 (19)0.019 (2)0.0117 (17)0.0011 (17)0.0028 (14)−0.0029 (16)
I1—C72.106 (4)C3—C41.417 (5)
I2—C32.103 (4)C4—C51.402 (5)
I3—C52.104 (4)C5—C61.392 (6)
O1—C11.294 (5)C6—C71.400 (5)
O1—H10.84 (3)C6—C81.512 (5)
O2—C11.214 (4)C9—C101.365 (6)
O3—C81.302 (5)C9—H90.9500
O3—H30.84 (3)C10—C111.394 (6)
O4—C81.212 (5)C10—H100.9500
O5—N21.335 (4)C11—C121.407 (5)
O6—N31.335 (4)C11—C161.469 (6)
O1W—H1W10.84 (3)C12—C131.366 (6)
O1W—H1W20.84 (3)C12—H12A0.9500
N1—C41.356 (5)C13—H130.9500
N1—H110.88 (3)C14—C151.362 (6)
N1—H120.88 (3)C14—H140.9500
N2—C131.347 (5)C15—C161.402 (5)
N2—C91.354 (5)C15—H150.9500
N3—C141.341 (5)C16—C171.408 (5)
N3—C181.364 (5)C17—C181.365 (6)
C1—C21.525 (5)C17—H170.9500
C2—C31.386 (5)C18—H180.9500
C2—C71.401 (5)
C1—O1—H1111 (4)O4—C8—O3126.9 (3)
C8—O3—H3113 (4)O4—C8—C6120.4 (4)
H1W1—O1W—H1W2103 (5)O3—C8—C6112.6 (3)
C4—N1—H11124 (3)N2—C9—C10120.0 (4)
C4—N1—H12122 (3)N2—C9—H9120.0
H11—N1—H12108 (4)C10—C9—H9120.0
O5—N2—C13118.6 (3)C9—C10—C11122.0 (4)
O5—N2—C9121.0 (3)C9—C10—H10119.0
C13—N2—C9120.4 (4)C11—C10—H10119.0
O6—N3—C14119.2 (3)C10—C11—C12115.6 (4)
O6—N3—C18120.4 (3)C10—C11—C16123.4 (3)
C14—N3—C18120.4 (4)C12—C11—C16121.0 (3)
O2—C1—O1126.0 (3)C13—C12—C11121.2 (4)
O2—C1—C2121.2 (3)C13—C12—H12A119.4
O1—C1—C2112.8 (3)C11—C12—H12A119.4
C3—C2—C7120.0 (3)N2—C13—C12120.7 (4)
C3—C2—C1121.0 (3)N2—C13—H13119.7
C7—C2—C1119.0 (4)C12—C13—H13119.7
C2—C3—C4121.9 (3)N3—C14—C15121.0 (4)
C2—C3—I2120.9 (3)N3—C14—H14119.5
C4—C3—I2117.0 (3)C15—C14—H14119.5
N1—C4—C5122.5 (3)C14—C15—C16121.2 (4)
N1—C4—C3121.1 (3)C14—C15—H15119.4
C5—C4—C3116.4 (4)C16—C15—H15119.4
C6—C5—C4122.7 (3)C15—C16—C17116.0 (4)
C6—C5—I3119.0 (2)C15—C16—C11122.2 (4)
C4—C5—I3118.2 (3)C17—C16—C11121.7 (3)
C5—C6—C7119.4 (3)C18—C17—C16121.4 (4)
C5—C6—C8120.2 (3)C18—C17—H17119.3
C7—C6—C8120.4 (3)C16—C17—H17119.3
C6—C7—C2119.6 (4)N3—C18—C17119.9 (3)
C6—C7—I1119.4 (3)N3—C18—H18120.0
C2—C7—I1120.9 (3)C17—C18—H18120.0
O2—C1—C2—C3−97.1 (5)C5—C6—C8—O494.5 (5)
O1—C1—C2—C382.9 (5)C7—C6—C8—O4−87.0 (5)
O2—C1—C2—C783.2 (5)C5—C6—C8—O3−85.4 (5)
O1—C1—C2—C7−96.8 (4)C7—C6—C8—O393.1 (4)
C7—C2—C3—C40.2 (6)O5—N2—C9—C10177.0 (4)
C1—C2—C3—C4−179.5 (4)C13—N2—C9—C10−1.5 (6)
C7—C2—C3—I2174.9 (3)N2—C9—C10—C11−1.6 (6)
C1—C2—C3—I2−4.8 (5)C9—C10—C11—C123.9 (6)
C2—C3—C4—N1−178.8 (4)C9—C10—C11—C16−174.8 (4)
I2—C3—C4—N16.3 (5)C10—C11—C12—C13−3.4 (6)
C2—C3—C4—C50.8 (6)C16—C11—C12—C13175.4 (4)
I2—C3—C4—C5−174.1 (3)O5—N2—C13—C12−176.5 (3)
N1—C4—C5—C6177.4 (4)C9—N2—C13—C122.0 (6)
C3—C4—C5—C6−2.1 (6)C11—C12—C13—N20.6 (6)
N1—C4—C5—I3−7.7 (5)O6—N3—C14—C15−176.9 (3)
C3—C4—C5—I3172.7 (3)C18—N3—C14—C151.2 (6)
C4—C5—C6—C72.5 (6)N3—C14—C15—C161.3 (6)
I3—C5—C6—C7−172.3 (3)C14—C15—C16—C17−2.4 (6)
C4—C5—C6—C8−179.0 (4)C14—C15—C16—C11174.0 (4)
I3—C5—C6—C86.2 (5)C10—C11—C16—C1512.1 (6)
C5—C6—C7—C2−1.4 (6)C12—C11—C16—C15−166.5 (4)
C8—C6—C7—C2−179.9 (4)C10—C11—C16—C17−171.6 (4)
C5—C6—C7—I1174.5 (3)C12—C11—C16—C179.7 (6)
C8—C6—C7—I1−4.0 (5)C15—C16—C17—C181.1 (6)
C3—C2—C7—C60.1 (6)C11—C16—C17—C18−175.4 (4)
C1—C2—C7—C6179.8 (3)O6—N3—C18—C17175.6 (3)
C3—C2—C7—I1−175.7 (3)C14—N3—C18—C17−2.5 (6)
C1—C2—C7—I14.0 (5)C16—C17—C18—N31.3 (6)
D—H···AD—HH···AD···AD—H···A
O1—H1···O5i0.84 (3)1.64 (3)2.478 (4)174 (6)
O3—H3···O6ii0.84 (3)1.63 (3)2.465 (4)170 (7)
O1W—H1w1···O20.84 (3)2.30 (3)3.073 (4)154 (4)
O1W—H1w2···O5iii0.84 (3)2.12 (3)2.945 (4)167 (5)
N1—H11···O1wiv0.88 (3)2.20 (3)2.906 (5)138 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O5i0.84 (3)1.64 (3)2.478 (4)174 (6)
O3—H3⋯O6ii0.84 (3)1.63 (3)2.465 (4)170 (7)
O1W—H1w1⋯O20.84 (3)2.30 (3)3.073 (4)154 (4)
O1W—H1w2⋯O5iii0.84 (3)2.12 (3)2.945 (4)167 (5)
N1—H11⋯O1wiv0.88 (3)2.20 (3)2.906 (5)138 (4)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Tobias Beck; George M Sheldrick
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-06-19

3.  4-(4-Pyrid-yl)pyridinium 3-amino-5-carb-oxy-2,4,6-triiodo-benzoate-5-amino-2,4,6-triiodo-isophthalic acid (1/1).

Authors:  Kou-Lin Zhang; Guo-Wang Diao; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-13
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1.  8,10-Diiodo-2,6-dioxo-4λ-ioda-3,5-dioxatricyclo-[5.3.1.0]undeca-1(11),7,9-triene-9-carb-oxy-lic acid.

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