Literature DB >> 21727132

Epigenetic reprogramming in the germline: towards the ground state of the epigenome.

Petra Hajkova1.   

Abstract

Epigenetic reprogramming in the germline provides a developmental model to study the erasure of epigenetic memory as it occurs naturally in vivo in the course of normal embryonic development. Our data show that germline reprogramming comprises both active DNA demethylation and extensive chromatin remodelling that are mechanistically linked through the activation of the base excision DNA repair pathway involved in the DNA demethylation process. The observed molecular hallmarks of the germline reprogramming exhibit intriguing similarities to other dedifferentiation or regeneration systems, pointing towards the existence of unifying molecular pathways underlying cell fate reversal. Elucidation of molecular processes involved in the resetting of epigenetic information in vivo will thus add to our ability to manipulate cell fate and to restore pluripotency in in vitro settings.

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Year:  2011        PMID: 21727132      PMCID: PMC3130423          DOI: 10.1098/rstb.2011.0042

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  57 in total

1.  Reactivation of DNA replication in erythrocyte nuclei by Xenopus egg extract involves energy-dependent chromatin decondensation and changes in histone phosphorylation.

Authors:  T Blank; M Trendelenburg; J A Kleinschmidt
Journal:  Exp Cell Res       Date:  1992-10       Impact factor: 3.905

2.  NAD+-dependent modulation of chromatin structure and transcription by nucleosome binding properties of PARP-1.

Authors:  Mi Young Kim; Steven Mauro; Nicolas Gévry; John T Lis; W Lee Kraus
Journal:  Cell       Date:  2004-12-17       Impact factor: 41.582

3.  Oct4 is required for primordial germ cell survival.

Authors:  James Kehler; Elena Tolkunova; Birgit Koschorz; Maurizio Pesce; Luca Gentile; Michele Boiani; Hilda Lomelí; Andras Nagy; K John McLaughlin; Hans R Schöler; Alexey Tomilin
Journal:  EMBO Rep       Date:  2004-11       Impact factor: 8.807

Review 4.  Mammalian single-strand break repair: mechanisms and links with chromatin.

Authors:  Keith W Caldecott
Journal:  DNA Repair (Amst)       Date:  2006-11-21

5.  Gadd45a promotes epigenetic gene activation by repair-mediated DNA demethylation.

Authors:  Guillermo Barreto; Andrea Schäfer; Joachim Marhold; Dirk Stach; Suresh K Swaminathan; Vikas Handa; Gabi Döderlein; Nicole Maltry; Wei Wu; Frank Lyko; Christof Niehrs
Journal:  Nature       Date:  2007-01-31       Impact factor: 49.962

6.  Completion of mouse embryogenesis requires both the maternal and paternal genomes.

Authors:  J McGrath; D Solter
Journal:  Cell       Date:  1984-05       Impact factor: 41.582

Review 7.  Cell cycle co-ordination in embryo cloning by nuclear transfer.

Authors:  K H Campbell; P Loi; P J Otaegui; I Wilmut
Journal:  Rev Reprod       Date:  1996-01

8.  Critical function of Prdm14 for the establishment of the germ cell lineage in mice.

Authors:  Masashi Yamaji; Yoshiyuki Seki; Kazuki Kurimoto; Yukihiro Yabuta; Mihoko Yuasa; Mayo Shigeta; Kaori Yamanaka; Yasuhide Ohinata; Mitinori Saitou
Journal:  Nat Genet       Date:  2008-07-11       Impact factor: 38.330

9.  The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain.

Authors:  Skirmantas Kriaucionis; Nathaniel Heintz
Journal:  Science       Date:  2009-04-16       Impact factor: 47.728

10.  DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45.

Authors:  Kunal Rai; Ian J Huggins; Smitha R James; Adam R Karpf; David A Jones; Bradley R Cairns
Journal:  Cell       Date:  2008-12-26       Impact factor: 41.582

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  38 in total

Review 1.  Transgenerational Inheritance of Paternal Neurobehavioral Phenotypes: Stress, Addiction, Ageing and Metabolism.

Authors:  Ti-Fei Yuan; Ang Li; Xin Sun; Huan Ouyang; Carlos Campos; Nuno B F Rocha; Oscar Arias-Carrión; Sergio Machado; Gonglin Hou; Kwok Fai So
Journal:  Mol Neurobiol       Date:  2015-11-16       Impact factor: 5.590

Review 2.  The reciprocal relationship between primordial germ cells and pluripotent stem cells.

Authors:  Mehdi Pirouz; Alexander Klimke; Michael Kessel
Journal:  J Mol Med (Berl)       Date:  2012-05-15       Impact factor: 4.599

Review 3.  Toward a more precise and informative nomenclature describing fetal and neonatal male germ cells in rodents.

Authors:  John R McCarrey
Journal:  Biol Reprod       Date:  2013-08-29       Impact factor: 4.285

Review 4.  Epigenetic choreography of stem cells: the DNA demethylation episode of development.

Authors:  Swayamsiddha Kar; Sabnam Parbin; Moonmoon Deb; Arunima Shilpi; Dipta Sengupta; Sandip Kumar Rath; Madhumita Rakshit; Aditi Patra; Samir Kumar Patra
Journal:  Cell Mol Life Sci       Date:  2013-10-10       Impact factor: 9.261

5.  DNA Demethylation Dynamics in the Human Prenatal Germline.

Authors:  Sofia Gkountela; Kelvin X Zhang; Tiasha A Shafiq; Wen-Wei Liao; Joseph Hargan-Calvopiña; Pao-Yang Chen; Amander T Clark
Journal:  Cell       Date:  2015-05-21       Impact factor: 41.582

6.  The evolving biology of cell reprogramming.

Authors:  Ian Wilmut; Gareth Sullivan; Ian Chambers
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-08-12       Impact factor: 6.237

Review 7.  Recent advancements in cloning by somatic cell nuclear transfer.

Authors:  Atsuo Ogura; Kimiko Inoue; Teruhiko Wakayama
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-01-05       Impact factor: 6.237

Review 8.  Epigenetic inheritance: a contributor to species differentiation?

Authors:  Dario Boffelli; David I K Martin
Journal:  DNA Cell Biol       Date:  2012-09-11       Impact factor: 3.311

Review 9.  Epigenetic reprogramming in plant sexual reproduction.

Authors:  Tomokazu Kawashima; Frédéric Berger
Journal:  Nat Rev Genet       Date:  2014-07-22       Impact factor: 53.242

Review 10.  Facilitation of base excision repair by chromatin remodeling.

Authors:  John M Hinz; Wioletta Czaja
Journal:  DNA Repair (Amst)       Date:  2015-09-16
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