Literature DB >> 21727126

The evolving biology of small molecules: controlling cell fate and identity.

Jem A Efe1, Sheng Ding.   

Abstract

Small molecules have been playing important roles in elucidating basic biology and treatment of a vast number of diseases for nearly a century, making their use in the field of stem cell biology a comparatively recent phenomenon. Nonetheless, the power of biology-oriented chemical design and synthesis, coupled with significant advances in screening technology, has enabled the discovery of a growing number of small molecules that have improved our understanding of stem cell biology and allowed us to manipulate stem cells in unprecedented ways. This review focuses on recent small molecule studies of (i) the key pathways governing stem cell homeostasis, (ii) the pluripotent stem cell niche, (iii) the directed differentiation of stem cells, (iv) the biology of adult stem cells, and (v) somatic cell reprogramming. In a very short period of time, small molecules have defined a perhaps universally attainable naive ground state of pluripotency, and are facilitating the precise, rapid and efficient differentiation of stem cells into somatic cell populations relevant to the clinic. Finally, following the publication of numerous groundbreaking studies at a pace and consistency unusual for a young field, we are closer than ever to completely eliminating the need for genetic modification in reprogramming.

Mesh:

Year:  2011        PMID: 21727126      PMCID: PMC3130415          DOI: 10.1098/rstb.2011.0006

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  94 in total

1.  A combined chemical and genetic approach for the generation of induced pluripotent stem cells.

Authors:  Yan Shi; Jeong Tae Do; Caroline Desponts; Heung Sik Hahm; Hans R Schöler; Sheng Ding
Journal:  Cell Stem Cell       Date:  2008-06-05       Impact factor: 24.633

2.  Dissecting direct reprogramming through integrative genomic analysis.

Authors:  Tarjei S Mikkelsen; Jacob Hanna; Xiaolan Zhang; Manching Ku; Marius Wernig; Patrick Schorderet; Bradley E Bernstein; Rudolf Jaenisch; Eric S Lander; Alexander Meissner
Journal:  Nature       Date:  2008-05-28       Impact factor: 49.962

Review 3.  Molecular and biological properties of pluripotent embryonic stem cells.

Authors:  S Ohtsuka; S Dalton
Journal:  Gene Ther       Date:  2007-11-08       Impact factor: 5.250

Review 4.  Differentiation of embryonic stem cells to clinically relevant populations: lessons from embryonic development.

Authors:  Charles E Murry; Gordon Keller
Journal:  Cell       Date:  2008-02-22       Impact factor: 41.582

5.  R-Spondin1 regulates Wnt signaling by inhibiting internalization of LRP6.

Authors:  Minke E Binnerts; Kyung-Ah Kim; Jessica M Bright; Sejal M Patel; Karolyn Tran; Mei Zhou; John M Leung; Yi Liu; Woodrow E Lomas; Melissa Dixon; Sophie A Hazell; Marie Wagle; Wen-Sheng Nie; Nenad Tomasevic; Jason Williams; Xiaoming Zhan; Michael D Levy; Walter D Funk; Arie Abo
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-05       Impact factor: 11.205

6.  Cardiomyocytes derived from human embryonic stem cells in pro-survival factors enhance function of infarcted rat hearts.

Authors:  Michael A Laflamme; Kent Y Chen; Anna V Naumova; Veronica Muskheli; James A Fugate; Sarah K Dupras; Hans Reinecke; Chunhui Xu; Mohammad Hassanipour; Shailaja Police; Chris O'Sullivan; Lila Collins; Yinhong Chen; Elina Minami; Edward A Gill; Shuichi Ueno; Chun Yuan; Joseph Gold; Charles E Murry
Journal:  Nat Biotechnol       Date:  2007-08-26       Impact factor: 54.908

7.  The renewal and differentiation of Isl1+ cardiovascular progenitors are controlled by a Wnt/beta-catenin pathway.

Authors:  Yibing Qyang; Silvia Martin-Puig; Murali Chiravuri; Shuibing Chen; Huansheng Xu; Lei Bu; Xin Jiang; Lizhu Lin; Anne Granger; Alessandra Moretti; Leslie Caron; Xu Wu; Jonathan Clarke; Makoto M Taketo; Karl-Ludwig Laugwitz; Randall T Moon; Peter Gruber; Sylvia M Evans; Sheng Ding; Kenneth R Chien
Journal:  Cell Stem Cell       Date:  2007-06-14       Impact factor: 24.633

Review 8.  Chemokines in hematopoiesis.

Authors:  Hal E Broxmeyer
Journal:  Curr Opin Hematol       Date:  2008-01       Impact factor: 3.284

9.  The ground state of embryonic stem cell self-renewal.

Authors:  Qi-Long Ying; Jason Wray; Jennifer Nichols; Laura Batlle-Morera; Bradley Doble; James Woodgett; Philip Cohen; Austin Smith
Journal:  Nature       Date:  2008-05-22       Impact factor: 49.962

10.  Albumin-associated lipids regulate human embryonic stem cell self-renewal.

Authors:  Francesc R Garcia-Gonzalo; Juan Carlos Izpisúa Belmonte
Journal:  PLoS One       Date:  2008-01-02       Impact factor: 3.240

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  21 in total

Review 1.  Generation of pluripotent stem cells without the use of genetic material.

Authors:  Akon Higuchi; Qing-Dong Ling; S Suresh Kumar; Murugan A Munusamy; Abdullah A Alarfaj; Yung Chang; Shih-Hsuan Kao; Ke-Chen Lin; Han-Chow Wang; Akihiro Umezawa
Journal:  Lab Invest       Date:  2014-11-03       Impact factor: 5.662

2.  Non-viral iPSCs: a safe way for therapy?

Authors:  Weiqi Zhang; Di Guan; Jing Qu; Weizhou Zhang; Guang-Hui Liu
Journal:  Protein Cell       Date:  2012-04       Impact factor: 14.870

Review 3.  Cellular reprogramming: a new technology frontier in pharmaceutical research.

Authors:  Amy Brock; Hui-Tong Goh; Binxia Yang; Yu Lu; Hu Li; Yuin-Han Loh
Journal:  Pharm Res       Date:  2011-11-09       Impact factor: 4.200

Review 4.  The reciprocal relationship between primordial germ cells and pluripotent stem cells.

Authors:  Mehdi Pirouz; Alexander Klimke; Michael Kessel
Journal:  J Mol Med (Berl)       Date:  2012-05-15       Impact factor: 4.599

5.  Making cardiomyocytes with your chemistry set: Small molecule-induced cardiogenesis in somatic cells.

Authors:  Woong-Hee Kim; Da-Woon Jung; Darren Reece Williams
Journal:  World J Cardiol       Date:  2015-03-26

6.  Generation of eye field/optic vesicle-like structures from human embryonic stem cells under two-dimensional and chemically defined conditions.

Authors:  Maryam Parvini; Kazem Parivar; Fatemeh Safari; Mahdi Tondar
Journal:  In Vitro Cell Dev Biol Anim       Date:  2014-11-27       Impact factor: 2.416

Review 7.  An Insight into DNA-free Reprogramming Approaches to Generate Integration-free Induced Pluripotent Stem Cells for Prospective Biomedical Applications.

Authors:  Manash P Borgohain; Krishna Kumar Haridhasapavalan; Chandrima Dey; Poulomi Adhikari; Rajkumar P Thummer
Journal:  Stem Cell Rev Rep       Date:  2019-04       Impact factor: 5.739

8.  The evolving biology of cell reprogramming.

Authors:  Ian Wilmut; Gareth Sullivan; Ian Chambers
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-08-12       Impact factor: 6.237

Review 9.  Small molecules, big roles -- the chemical manipulation of stem cell fate and somatic cell reprogramming.

Authors:  Yu Zhang; Wenlin Li; Timothy Laurent; Sheng Ding
Journal:  J Cell Sci       Date:  2012-12-01       Impact factor: 5.285

10.  Directed neural differentiation of induced pluripotent stem cells from non-human primates.

Authors:  Steven L Farnsworth; Zhifang Qiu; Anuja Mishra; Peter J Hornsby
Journal:  Exp Biol Med (Maywood)       Date:  2013-03
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