Literature DB >> 30417242

An Insight into DNA-free Reprogramming Approaches to Generate Integration-free Induced Pluripotent Stem Cells for Prospective Biomedical Applications.

Manash P Borgohain1, Krishna Kumar Haridhasapavalan1, Chandrima Dey1, Poulomi Adhikari1, Rajkumar P Thummer2.   

Abstract

More than a decade ago, a pioneering study reported generation of induced Pluripotent Stem Cells (iPSCs) by ectopic expression of a cocktail of reprogramming factors in fibroblasts. This study has revolutionized stem cell research and has garnered immense interest from the scientific community globally. iPSCs hold tremendous potential for understanding human developmental biology, disease modeling, drug screening and discovery, and personalized cell-based therapeutic applications. The seminal study identified Oct4, Sox2, Klf4 and c-Myc as a potent combination of genes to induce reprogramming. Subsequently, various reprogramming factors were identified by numerous groups. Most of these studies have used integrating viral vectors to overexpress reprogramming factors in somatic cells to derive iPSCs. However, these techniques restrict the clinical applicability of these cells as they may alter the genome due to random viral integration resulting in insertional mutagenesis and tumorigenicity. To circumvent this issue, alternative integration-free reprogramming approaches are continuously developed that eliminate the risk of genomic modifications and improve the prospects of iPSCs from lab to clinic. These methods establish that integration of transgenes into the genome is not essential to induce pluripotency in somatic cells. This review provides a comprehensive overview of the most promising DNA-free reprogramming techniques that have the potential to derive integration-free iPSCs without genomic manipulation, such as sendai virus, recombinant proteins, microRNAs, synthetic messenger RNA and small molecules. The understanding of these approaches shall pave a way for the generation of clinical-grade iPSCs. Subsequently, these iPSCs can be differentiated into desired cell type(s) for various biomedical applications.

Entities:  

Keywords:  Cell reprogramming; Clinical-grade; Induced pluripotent stem cells; Non-integrative approaches; Reprogramming factors; Transgene-free

Year:  2019        PMID: 30417242     DOI: 10.1007/s12015-018-9861-6

Source DB:  PubMed          Journal:  Stem Cell Rev Rep        ISSN: 2629-3277            Impact factor:   5.739


  201 in total

1.  A new Sendai virus vector deficient in the matrix gene does not form virus particles and shows extensive cell-to-cell spreading.

Authors:  Makoto Inoue; Yumiko Tokusumi; Hiroshi Ban; Takumi Kanaya; Masayuki Shirakura; Tsuyoshi Tokusumi; Takahiro Hirata; Yoshiyuki Nagai; Akihiro Iida; Mamoru Hasegawa
Journal:  J Virol       Date:  2003-06       Impact factor: 5.103

2.  The developmental capacity of nuclei taken from intestinal epithelium cells of feeding tadpoles.

Authors:  J B GURDON
Journal:  J Embryol Exp Morphol       Date:  1962-12

Review 3.  Bolaamphiphiles.

Authors:  Jürgen-Hinrich Fuhrhop; Tianyu Wang
Journal:  Chem Rev       Date:  2004-06       Impact factor: 60.622

4.  Delivery of proteins into living cells by reversible membrane permeabilization with streptolysin-O.

Authors:  I Walev; S C Bhakdi; F Hofmann; N Djonder; A Valeva; K Aktories; S Bhakdi
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-06       Impact factor: 11.205

5.  Induction of tumors in mice by genomic hypomethylation.

Authors:  François Gaudet; J Graeme Hodgson; Amir Eden; Laurie Jackson-Grusby; Jessica Dausman; Joe W Gray; Heinrich Leonhardt; Rudolf Jaenisch
Journal:  Science       Date:  2003-04-18       Impact factor: 47.728

6.  Y2, the smallest of the Sendai virus C proteins, is fully capable of both counteracting the antiviral action of interferons and inhibiting viral RNA synthesis.

Authors:  A Kato; Y Ohnishi; M Kohase; S Saito; M Tashiro; Y Nagai
Journal:  J Virol       Date:  2001-04       Impact factor: 5.103

7.  Nontransmissible virus-like particle formation by F-deficient sendai virus is temperature sensitive and reduced by mutations in M and HN proteins.

Authors:  Makoto Inoue; Yumiko Tokusumi; Hiroshi Ban; Takumi Kanaya; Tsuyoshi Tokusumi; Yoshiyuki Nagai; Akihiro Iida; Mamoru Hasegawa
Journal:  J Virol       Date:  2003-03       Impact factor: 5.103

8.  A cytoplasmic RNA vector derived from nontransmissible Sendai virus with efficient gene transfer and expression.

Authors:  H O Li; Y F Zhu; M Asakawa; H Kuma; T Hirata; Y Ueda; Y S Lee; M Fukumura; A Iida; A Kato; Y Nagai; M Hasegawa
Journal:  J Virol       Date:  2000-07       Impact factor: 5.103

9.  Human embryonic stem cells express a unique set of microRNAs.

Authors:  Mi-Ra Suh; Yoontae Lee; Jung Yeon Kim; Soo-Kyoung Kim; Sung-Hwan Moon; Ji Yeon Lee; Kwang-Yul Cha; Hyung Min Chung; Hyun Soo Yoon; Shin Yong Moon; V Narry Kim; Kye-Seong Kim
Journal:  Dev Biol       Date:  2004-06-15       Impact factor: 3.582

Review 10.  Sendai virus vectors as an emerging negative-strand RNA viral vector system.

Authors:  Michael Bitzer; Sorin Armeanu; Ulrich M Lauer; Wolfgang J Neubert
Journal:  J Gene Med       Date:  2003-07       Impact factor: 4.565

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  25 in total

1.  Generation of a Recombinant Stem Cell-Specific Human SOX2 Protein from Escherichia coli Under Native Conditions.

Authors:  Madhuri Thool; Chandrima Dey; Srirupa Bhattacharyya; S Sudhagar; Rajkumar P Thummer
Journal:  Mol Biotechnol       Date:  2021-02-11       Impact factor: 2.695

2.  Soluble expression, purification, and secondary structure determination of human MESP1 transcription factor.

Authors:  Krishna Kumar Haridhasapavalan; Sujal Harsh Ranjan; Srirupa Bhattacharyya; Rajkumar P Thummer
Journal:  Appl Microbiol Biotechnol       Date:  2021-03-02       Impact factor: 4.813

Review 3.  A Comprehensive Review on the Role of ZSCAN4 in Embryonic Development, Stem Cells, and Cancer.

Authors:  Madhuri Thool; Pradeep Kumar Sundaravadivelu; S Sudhagar; Rajkumar P Thummer
Journal:  Stem Cell Rev Rep       Date:  2022-06-23       Impact factor: 5.739

4.  Protein Production and Purification of a Codon-Optimized Human NGN3 Transcription Factor from E. coli.

Authors:  Gloria Narayan; Akriti Agrawal; Neha Joshi; Ranadeep Gogoi; Shirisha Nagotu; Rajkumar P Thummer
Journal:  Protein J       Date:  2021-09-22       Impact factor: 2.371

Review 5.  Induced pluripotent stem cells as a tool for comparative physiology: lessons from the thirteen-lined ground squirrel.

Authors:  Jingxing Ou; Sarah Rosa; Luke E Berchowitz; Wei Li
Journal:  J Exp Biol       Date:  2019-10-04       Impact factor: 3.312

Review 6.  Induced pluripotent stem cells for neural drug discovery.

Authors:  Atena Farkhondeh; Rong Li; Kirill Gorshkov; Kevin G Chen; Matthew Might; Steven Rodems; Donald C Lo; Wei Zheng
Journal:  Drug Discov Today       Date:  2019-01-18       Impact factor: 7.851

7.  Non-modified RNA-Based Reprogramming of Human Dermal Fibroblasts into Induced Pluripotent Stem Cells.

Authors:  Immacolata Belviso; Franca Di Meglio; Veronica Romano; Stefania Montagnani; Clotilde Castaldo
Journal:  Methods Mol Biol       Date:  2022

8.  Generation of biologically active recombinant human OCT4 protein from E. coli.

Authors:  Chandrima Dey; Madhuri Thool; Srirupa Bhattacharyya; S Sudhagar; Rajkumar P Thummer
Journal:  3 Biotech       Date:  2021-04-08       Impact factor: 2.406

9.  Generation of cell-permeant recombinant human transcription factor GATA4 from E. coli.

Authors:  Krishna Kumar Haridhasapavalan; Pradeep Kumar Sundaravadivelu; Srirupa Bhattacharyya; Sujal Harsh Ranjan; Khyati Raina; Rajkumar P Thummer
Journal:  Bioprocess Biosyst Eng       Date:  2021-02-08       Impact factor: 3.210

Review 10.  An Overview on Promising Somatic Cell Sources Utilized for the Efficient Generation of Induced Pluripotent Stem Cells.

Authors:  Arnab Ray; Jahnavy Madhukar Joshi; Pradeep Kumar Sundaravadivelu; Khyati Raina; Nibedita Lenka; Vishwas Kaveeshwar; Rajkumar P Thummer
Journal:  Stem Cell Rev Rep       Date:  2021-06-07       Impact factor: 5.739

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