Literature DB >> 21725008

Differential accumulation of nif structural gene mRNA in Azotobacter vinelandii.

Trinity L Hamilton1, Marty Jacobson, Marcus Ludwig, Eric S Boyd, Donald A Bryant, Dennis R Dean, John W Peters.   

Abstract

Northern analysis was employed to investigate mRNA produced by mutant strains of Azotobacter vinelandii with defined deletions in the nif structural genes and in the intergenic noncoding regions. The results indicate that intergenic RNA secondary structures effect the differential accumulation of transcripts, supporting the high Fe protein-to-MoFe protein ratio required for optimal diazotrophic growth.

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Year:  2011        PMID： 21725008      PMCID： PMC3165501          DOI： 10.1128/JB.05100-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  19 in total

1.  Vienna RNA secondary structure server.

Authors:  Ivo L Hofacker
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

2.  Site-directed mutagenesis of the nitrogenase MoFe protein of Azotobacter vinelandii.

Authors:  K E Brigle; R A Setterquist; D R Dean; J S Cantwell; M C Weiss; W E Newton
Journal:  Proc Natl Acad Sci U S A       Date:  1987-10       Impact factor: 11.205

Review 3.  Exploring new frontiers of nitrogenase structure and mechanism.

Authors:  John W Peters; Robert K Szilagyi
Journal:  Curr Opin Chem Biol       Date:  2006-02-28       Impact factor: 8.822

4.  Transcriptional profiling of nitrogen fixation in Azotobacter vinelandii.

Authors:  Trinity L Hamilton; Marcus Ludwig; Ray Dixon; Eric S Boyd; Patricia C Dos Santos; João C Setubal; Donald A Bryant; Dennis R Dean; John W Peters
Journal:  J Bacteriol       Date:  2011-07-01       Impact factor: 3.490

5.  Levels and activities of nitrogenase proteins in Azotobacter vinelandii grown at different dissolved oxygen concentrations.

Authors:  C Dingler; J Kuhla; H Wassink; J Oelze
Journal:  J Bacteriol       Date:  1988-05       Impact factor: 3.490

6.  Formation of the nitrogen-fixing enzyme system in Azotobacter vinelandii.

Authors:  G W Strandberg; P W Wilson
Journal:  Can J Microbiol       Date:  1968-01       Impact factor: 2.419

7.  Analysis of single- and double-stranded nucleic acids on polyacrylamide and agarose gels by using glyoxal and acridine orange.

Authors:  G K McMaster; G G Carmichael
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

8.  Activity, reconstitution, and accumulation of nitrogenase components in Azotobacter vinelandii mutant strains containing defined deletions within the nitrogenase structural gene cluster.

Authors:  A C Robinson; B K Burgess; D R Dean
Journal:  J Bacteriol       Date:  1986-04       Impact factor: 3.490

9.  Physical and genetic map of the major nif gene cluster from Azotobacter vinelandii.

Authors:  M R Jacobson; K E Brigle; L T Bennett; R A Setterquist; M S Wilson; V L Cash; J Beynon; W E Newton; D R Dean
Journal:  J Bacteriol       Date:  1989-02       Impact factor: 3.490

10.  FragSeq: transcriptome-wide RNA structure probing using high-throughput sequencing.

Authors:  Jason G Underwood; Andrew V Uzilov; Sol Katzman; Courtney S Onodera; Jacob E Mainzer; David H Mathews; Todd M Lowe; Sofie R Salama; David Haussler
Journal:  Nat Methods       Date:  2010-11-07       Impact factor: 28.547
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  8 in total

1.  The novel regulatory ncRNA, NfiS, optimizes nitrogen fixation via base pairing with the nitrogenase gene nifK mRNA in Pseudomonas stutzeri A1501.

Authors:  Yuhua Zhan; Yongliang Yan; Zhiping Deng; Ming Chen; Wei Lu; Chao Lu; Liguo Shang; Zhimin Yang; Wei Zhang; Wei Wang; Yun Li; Qi Ke; Jiasi Lu; Yuquan Xu; Liwen Zhang; Zhihong Xie; Qi Cheng; Claudine Elmerich; Min Lin
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-12       Impact factor: 11.205

Review 2.  The Spectroscopy of Nitrogenases.

Authors:  Casey Van Stappen; Laure Decamps; George E Cutsail; Ragnar Bjornsson; Justin T Henthorn; James A Birrell; Serena DeBeer
Journal:  Chem Rev       Date:  2020-04-02       Impact factor: 60.622

3.  Kinetics of Nif gene expression in a nitrogen-fixing bacterium.

Authors:  César Poza-Carrión; Emilio Jiménez-Vicente; Mónica Navarro-Rodríguez; Carlos Echavarri-Erasun; Luis M Rubio
Journal:  J Bacteriol       Date:  2013-11-15       Impact factor: 3.490

4.  Conformationally Gated Electron Transfer in Nitrogenase. Isolation, Purification, and Characterization of Nitrogenase From Gluconacetobacter diazotrophicus.

Authors:  Cedric P Owens; Faik A Tezcan
Journal:  Methods Enzymol       Date:  2017-12-06       Impact factor: 1.600

5.  Preparation and spectroscopic characterization of lyophilized Mo nitrogenase.

Authors:  Casey Van Stappen; Laure Decamps; Serena DeBeer
Journal:  J Biol Inorg Chem       Date:  2020-12-30       Impact factor: 3.358

6.  A conformational role for NifW in the maturation of molybdenum nitrogenase P-cluster.

Authors:  Casey Van Stappen; Emilio Jiménez-Vicente; Ana Pérez-González; Zhi-Yong Yang; Lance C Seefeldt; Serena DeBeer; Dennis R Dean; Laure Decamps
Journal:  Chem Sci       Date:  2022-02-28       Impact factor: 9.825

7.  Streptomyces thermoautotrophicus does not fix nitrogen.

Authors:  Drew MacKellar; Lucas Lieber; Jeffrey S Norman; Anthony Bolger; Cory Tobin; James W Murray; Mehtap Oksaksin; Roger L Chang; Tyler J Ford; Peter Q Nguyen; Jimmy Woodward; Hugo R Permingeat; Neel S Joshi; Pamela A Silver; Björn Usadel; Alfred W Rutherford; Maren L Friesen; Jürgen Prell
Journal:  Sci Rep       Date:  2016-02-01       Impact factor: 4.379

8.  Expression of Active Subunit of Nitrogenase via Integration into Plant Organelle Genome.

Authors:  Natalia B Ivleva; Jeanna Groat; Jeffrey M Staub; Michael Stephens
Journal:  PLoS One       Date:  2016-08-16       Impact factor: 3.240
  8 in total

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