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Literature DB >> 21717153

Allele and haplotype diversity of X-chromosomal STRs in Ivory Coast.

Serena Pasino¹, Stefano Caratti, Massimiliano Del Pero, Alfredo Santovito, Carlo Torre, Carlo Robino.

Abstract

Twenty-one X-chromosomal short tandem repeat (STR) loci, including the six clusters of linked markers DXS10148-DXS10135-DXS8378 (Xp22), DXS7132-DXS10079-DXS10074 (Xq12), DXS6801-DXS6809-DXS6789 (Xq21), DXS7424-DXS101 (Xq22), DXS10103-HPRTB-DXS10101 (Xq26), DXS8377-DXS10146-DXS10134-DXS7423 (Xq28) and the loci DXS6800, GATA172D05 and DXS10011 were typed in a population sample from Ivory Coast (n=125; 51 men and 74 women). Allele and haplotype frequencies as well as linkage disequilibrium data for kinship calculations are provided. On the whole, no significant differences in the genetic variability of X-STR markers were observed between Ivorians and other sub-Saharan African populations belonging to the Niger-Kordofanian linguistic group.

Entities: Gene Species

Mesh：

Year: 2011 PMID： 21717153 DOI： 10.1007/s00414-011-0591-4

Source DB: PubMed Journal: Int J Legal Med ISSN： 0937-9827 Impact factor: 2.686

32 in total

1. Identification of a D8S1179 primer binding site mutation and the validation of a primer designed to recover null alleles.

Authors: Craig Leibelt; Bruce Budowle; Patrick Collins; Yasser Daoudi; Tamyra Moretti; Gary Nunn; Dennis Reeder; Rhonda Roby
Journal: Forensic Sci Int Date: 2003-05-05 Impact factor: 2.395

2. Concordance and population studies along with stutter and peak height ratio analysis for the PowerPlex ® ESX 17 and ESI 17 Systems.

Authors: Carolyn R Hill; David L Duewer; Margaret C Kline; Cynthia J Sprecher; Robert S McLaren; Dawn R Rabbach; Benjamin E Krenke; Martin G Ensenberger; Patricia M Fulmer; Douglas R Storts; John M Butler
Journal: Forensic Sci Int Genet Date: 2010-04-22 Impact factor: 4.882

3. Linkage and linkage disequilibrium analysis of X-STRs in Italian families.

Authors: Serena Inturri; Silvia Menegon; Antonio Amoroso; Carlo Torre; Carlo Robino
Journal: Forensic Sci Int Genet Date: 2010-11-18 Impact factor: 4.882

Review 4. X-chromosomal markers: past, present and future.

Authors: Reinhard Szibor
Journal: Forensic Sci Int Genet Date: 2007-04-27 Impact factor: 4.882

5. Analysis of linkage and linkage disequilibrium for eight X-STR markers.

Authors: Andreas O Tillmar; Petter Mostad; Thore Egeland; Bertil Lindblom; Gunilla Holmlund; Kerstin Montelius
Journal: Forensic Sci Int Genet Date: 2008-10-26 Impact factor: 4.882

6. Nomenclature discrepancies in the HPRTB short tandem repeat.

Authors: Reinhard Szibor; Jeanett Edelmann; Sandra Hering; Iva Gomes; Leonor Gusmão
Journal: Int J Legal Med Date: 2009-01-10 Impact factor: 2.686

7. DNA-testing for immigration cases: the risk of erroneous conclusions.

Authors: Andreas O Karlsson; Gunilla Holmlund; Thore Egeland; Petter Mostad
Journal: Forensic Sci Int Date: 2007-02-20 Impact factor: 2.395

8. Analysis of 21 X-chromosomal STRs in an Algerian population sample.

Authors: Asmahan Bekada; Soraya Benhamamouch; Abdallah Boudjema; Mustapha Fodil; Silvia Menegon; Carlo Torre; Carlo Robino
Journal: Int J Legal Med Date: 2009-12-11 Impact factor: 2.686

9. The genetic structure and history of Africans and African Americans.

Authors: Sarah A Tishkoff; Floyd A Reed; Françoise R Friedlaender; Christopher Ehret; Alessia Ranciaro; Alain Froment; Jibril B Hirbo; Agnes A Awomoyi; Jean-Marie Bodo; Ogobara Doumbo; Muntaser Ibrahim; Abdalla T Juma; Maritha J Kotze; Godfrey Lema; Jason H Moore; Holly Mortensen; Thomas B Nyambo; Sabah A Omar; Kweli Powell; Gideon S Pretorius; Michael W Smith; Mahamadou A Thera; Charles Wambebe; James L Weber; Scott M Williams
Journal: Science Date: 2009-04-30 Impact factor: 47.728

Allele and haplotype diversity of X-chromosomal STRs in Ivory Coast.

1. Identification of a D8S1179 primer binding site mutation and the validation of a primer designed to recover null alleles.

2. Concordance and population studies along with stutter and peak height ratio analysis for the PowerPlex ® ESX 17 and ESI 17 Systems.

3. Linkage and linkage disequilibrium analysis of X-STRs in Italian families.

Review 4. X-chromosomal markers: past, present and future.

5. Analysis of linkage and linkage disequilibrium for eight X-STR markers.

6. Nomenclature discrepancies in the HPRTB short tandem repeat.

7. DNA-testing for immigration cases: the risk of erroneous conclusions.

8. Analysis of 21 X-chromosomal STRs in an Algerian population sample.

9. The genetic structure and history of Africans and African Americans.

10. A worldwide phylogeography for the human X chromosome.

1. Development and population study of the 12 X-STR loci multiplexes PCR systems.

2. Genetic study of 12 X-STRs in Malay population living in and around Kuala Lumpur using Investigator Argus X-12 kit.

3. Allele and Haplotype Diversity of 26 X-STR Loci in Four Nationality Populations from China.

4. Genetic polymorphisms and forensic efficiency of 19 X-chromosomal STR loci for Xinjiang Mongolian population.

5. Haplotype data and forensic evaluation of 23 Y-STR and 12 X-STR loci in eight ethnic groups from Eritrea.