Literature DB >> 21717152

Development of 11 X-STR loci typing system and genetic analysis in Tibetan and Northern Han populations from China.

Chengtao Li1, Teng Ma, Shumin Zhao, Suhua Zhang, Jing Xu, Ziqin Zhao, Li Jin, Shilin Li.   

Abstract

X-chromosomal short tandem repeats (X-STRs) loci are used for forensic practice in recent years which play increasingly important roles in some complex kinship cases. In this paper, a new multiplex polymerase chain reaction (PCR) system which can simultaneously analyze 11 X-STR markers (DXS8378, DXS6795, DXS7132, DXS6803, DXS9898, DXS6801, DXS7133, GATA165B12, HPRTB, DXS8377 and DXS7423) was developed. The samples of 1,605 (742 males and 863 females) unrelated individuals from Tibetan and Northern Han population were successfully analyzed using this multiplex system. A total of 103 alleles for all the loci were observed. Hardy-Weinberg equilibrium tests demonstrated no significant deviation from expected values (P > 0.05) for all of the 11 X-STR loci in the two studied populations. Polymorphism information contents of the loci were 0.3864-0.9013, and powers of discrimination in females of the loci were 0.6317-0.9845. There were no statistically significant differences between Tibetan and Northern Han populations in allele distribution of the 11 X-STR loci, in line with analysis of molecular variance (AMOVA) results. Our work indicates that this multiplex system is useful for forensic analysis for the two populations in China.

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Year:  2011        PMID: 21717152     DOI: 10.1007/s00414-011-0592-3

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  22 in total

1.  Development of the nine X-STR loci typing system and genetic analysis in three nationality populations from China.

Authors:  Qiu-Ling Liu; De-Jian Lu; Xin-Guo Li; Hu Zhao; Jian-Miao Zhang; Yun-Ke Lai; Ye-Fei Chen
Journal:  Int J Legal Med       Date:  2010-10-22       Impact factor: 2.686

2.  Population genetic evaluation of eight X-chromosomal short tandem repeat loci using Mentype Argus X-8 PCR amplification kit.

Authors:  Dorit Becker; Heike Rodig; Christa Augustin; Jeanett Edelmann; Frank Götz; Sandra Hering; Reinhard Szibor; Werner Brabetz
Journal:  Forensic Sci Int Genet       Date:  2007-09-29       Impact factor: 4.882

Review 3.  X-chromosomal markers: past, present and future.

Authors:  Reinhard Szibor
Journal:  Forensic Sci Int Genet       Date:  2007-04-27       Impact factor: 4.882

4.  Genomic dissection of population substructure of Han Chinese and its implication in association studies.

Authors:  Shuhua Xu; Xianyong Yin; Shilin Li; Wenfei Jin; Haiyi Lou; Ling Yang; Xiaohong Gong; Hongyan Wang; Yiping Shen; Xuedong Pan; Yungang He; Yajun Yang; Yi Wang; Wenqing Fu; Yu An; Jiucun Wang; Jingze Tan; Ji Qian; Xiaoli Chen; Xin Zhang; Yangfei Sun; Xuejun Zhang; Bailin Wu; Li Jin
Journal:  Am J Hum Genet       Date:  2009-12       Impact factor: 11.025

5.  Characteristics of eight X-STR loci for forensic purposes in the Chinese population.

Authors:  Hai-bo Luo; Yi Ye; Yan-yun Wang; Wei-bo Liang; Li-bing Yun; Miao Liao; Jing Yan; Jin Wu; Ying-bi Li; Yi-ping Hou
Journal:  Int J Legal Med       Date:  2009-11-19       Impact factor: 2.686

6.  Diversity of 15 human X chromosome microsatellite loci in Polish population.

Authors:  Sylwia Łuczak; Urszula Rogalla; Boris A Malyarchuk; Tomasz Grzybowski
Journal:  Forensic Sci Int Genet       Date:  2011-01-22       Impact factor: 4.882

7.  A mitochondrial revelation of early human migrations to the Tibetan Plateau before and after the last glacial maximum.

Authors:  Zhendong Qin; Yajun Yang; Longli Kang; Shi Yan; Kelly Cho; Xiaoyun Cai; Yan Lu; Hongxiang Zheng; Dongchen Zhu; Dongmei Fei; Shilin Li; Li Jin; Hui Li
Journal:  Am J Phys Anthropol       Date:  2010-12       Impact factor: 2.868

8.  Analysis of 21 X-chromosomal STRs in an Algerian population sample.

Authors:  Asmahan Bekada; Soraya Benhamamouch; Abdallah Boudjema; Mustapha Fodil; Silvia Menegon; Carlo Torre; Carlo Robino
Journal:  Int J Legal Med       Date:  2009-12-11       Impact factor: 2.686

Review 9.  Construction of a genetic linkage map in man using restriction fragment length polymorphisms.

Authors:  D Botstein; R L White; M Skolnick; R W Davis
Journal:  Am J Hum Genet       Date:  1980-05       Impact factor: 11.025

10.  GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update.

Authors:  Rod Peakall; Peter E Smouse
Journal:  Bioinformatics       Date:  2012-07-20       Impact factor: 6.937

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  4 in total

1.  Genetic polymorphisms of 12 X-STR for forensic purposes in Shanghai Han population from China.

Authors:  Suhua Zhang; Shumin Zhao; Ruxin Zhu; Chengtao Li
Journal:  Mol Biol Rep       Date:  2011-12-22       Impact factor: 2.316

2.  Genetic analysis of 19 X chromosome STR loci for forensic purposes in four Chinese ethnic groups.

Authors:  Xingyi Yang; Xiaofang Zhang; Junyong Zhu; Linli Chen; Changhui Liu; Xingling Feng; Ling Chen; Huijun Wang; Chao Liu
Journal:  Sci Rep       Date:  2017-02-17       Impact factor: 4.379

3.  X-chromosomal STR-based genetic structure of Sichuan Tibetan minority ethnicity group and its relationships to various groups.

Authors:  Guanglin He; Ye Li; Xing Zou; Ying Zhang; Hepei Li; Mengge Wang; Jin Wu
Journal:  Int J Legal Med       Date:  2017-09-03       Impact factor: 2.686

4.  Genetic analysis of twelve X-chromosomal STRs in Japanese and Chinese populations.

Authors:  Seisaku Uchigasaki; Jian Tie; Daisuke Takahashi
Journal:  Mol Biol Rep       Date:  2012-12-30       Impact factor: 2.316

  4 in total

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