Literature DB >> 21700800

Development of microsatellite markers for Miscanthus sinensis (Poaceae) and cross-amplification in other related species.

Hai-Fei Zhou1, Shan-Shan Li, Song Ge.   

Abstract

PREMISE OF THE STUDY: We developed microsatellite loci for the biomass crop Miscanthus sinensis to investigate genetic diversity and population structure of M. sinensis and its closely related species. METHODS AND
RESULTS: Fourteen microsatellite loci were identified from an enriched genomic library of M. sinensis and tested in one M. sinensis population. The number of alleles per locus ranged from 1 to 15, with a mean of 7.0. The observed and expected heterozygosities varied from 0.318 to 0.864 and from 0.424 to 0.901, respectively. Of them, 12 primers could be applied to three other species in Miscanthus (M. sacchariflorus, M. floridulus, and M. lutarioriparius).
CONCLUSIONS: These markers will be important for further analyzing population genetics and evolutionary history, as well as facilitating molecular breeding of Miscanthus sinensis and its related species.

Entities:  

Mesh:

Year:  2011        PMID: 21700800     DOI: 10.3732/ajb.1100040

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  5 in total

1.  Marker-Trait Association for Biomass Yield of Potential Bio-fuel Feedstock Miscanthus sinensis from Southwest China.

Authors:  Gang Nie; Linkai Huang; Xinquan Zhang; Megan Taylor; Yiwei Jiang; Xiaoqing Yu; Xinchun Liu; Xinyu Wang; Yajie Zhang
Journal:  Front Plant Sci       Date:  2016-06-07       Impact factor: 5.753

2.  Genetic diversity and population structure of Miscanthus sinensis germplasm in China.

Authors:  Hua Zhao; Bo Wang; Junrong He; Junpin Yang; Lei Pan; Dongfa Sun; Junhua Peng
Journal:  PLoS One       Date:  2013-10-07       Impact factor: 3.240

3.  Development of novel microsatellite markers for the BBCC Oryza genome (Poaceae) using high-throughput sequencing technology.

Authors:  Caihong Wang; Xiaojiao Liu; Suotang Peng; Qun Xu; Xiaoping Yuan; Yue Feng; Hanyong Yu; Yiping Wang; Xinghua Wei
Journal:  PLoS One       Date:  2014-03-14       Impact factor: 3.240

4.  Isolation and characterization of microsatellite loci for a bioenergy grass, Miscanthus sacchariflorus (Poaceae).

Authors:  Hai-Fei Zhou; Shan-Shan Li; Song Ge
Journal:  Appl Plant Sci       Date:  2013-01-02       Impact factor: 1.936

5.  Nuclear SSR markers for Miscanthus, Saccharum, and related grasses (Saccharinae, Poaceae).

Authors:  Trevor R Hodkinson; Mariateresa de Cesare; Susanne Barth
Journal:  Appl Plant Sci       Date:  2013-11-07       Impact factor: 1.936

  5 in total

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