Literature DB >> 2170025

Targeted snRNP depletion reveals an additional role for mammalian U1 snRNP in spliceosome assembly.

S M Barabino1, B J Blencowe, U Ryder, B S Sproat, A I Lamond.   

Abstract

HeLa cell nuclear splicing extracts have been prepared that are specifically and efficiently depleted of U1, U2, or U4/U6 snRNPs by antisense affinity chromatography using biotinylated 2'-OMe RNA oligonucleotides. Removal of each snRNP particle prevents pre-mRNA splicing but arrests spliceosome formation at different stages of assembly. Mixing extracts depleted for different snRNP particles restores formation of functional splicing complexes. Specific binding of factors to the 3' splice site region is still detected in snRNP-depleted extracts. Depletion of U1 snRNP impairs stable binding of U2 snRNP to the pre-mRNA branch site. This role of U1 snRNP in promoting stable preslicing complex formation is independent of the U1 snRNA-5' splice site interaction.

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Year:  1990        PMID: 2170025     DOI: 10.1016/0092-8674(90)90162-8

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  72 in total

1.  PUF60: a novel U2AF65-related splicing activity.

Authors:  P S Page-McCaw; K Amonlirdviman; P A Sharp
Journal:  RNA       Date:  1999-12       Impact factor: 4.942

2.  Prespliceosomal assembly on microinjected precursor mRNA takes place in nuclear speckles.

Authors:  I Melcák; S Melcáková; V Kopský; J Vecerová; I Raska
Journal:  Mol Biol Cell       Date:  2001-02       Impact factor: 4.138

3.  Initial recognition of U12-dependent introns requires both U11/5' splice-site and U12/branchpoint interactions.

Authors:  M J Frilander; J A Steitz
Journal:  Genes Dev       Date:  1999-04-01       Impact factor: 11.361

4.  Functional selection of splicing enhancers that stimulate trans-splicing in vitro.

Authors:  L A Boukis; J P Bruzik
Journal:  RNA       Date:  2001-06       Impact factor: 4.942

5.  Interaction of hnRNP A1 with snRNPs and pre-mRNAs: evidence for a possible role of A1 RNA annealing activity in the first steps of spliceosome assembly.

Authors:  M Buvoli; F Cobianchi; S Riva
Journal:  Nucleic Acids Res       Date:  1992-10-11       Impact factor: 16.971

6.  Analysis of spliceosome assembly and the structure of a regulated intron in Drosophila in vitro splicing extracts.

Authors:  D Spikes; P M Bingham
Journal:  Nucleic Acids Res       Date:  1992-11-11       Impact factor: 16.971

7.  The 5' splice site consensus RNA oligonucleotide induces assembly of U2/U4/U5/U6 small nuclear ribonucleoprotein complexes.

Authors:  K B Hall; M M Konarska
Journal:  Proc Natl Acad Sci U S A       Date:  1992-11-15       Impact factor: 11.205

8.  Ser/Thr-specific protein phosphatases are required for both catalytic steps of pre-mRNA splicing.

Authors:  J E Mermoud; P Cohen; A I Lamond
Journal:  Nucleic Acids Res       Date:  1992-10-25       Impact factor: 16.971

9.  The spliceosome assembly pathway in mammalian extracts.

Authors:  S F Jamison; A Crow; M A Garcia-Blanco
Journal:  Mol Cell Biol       Date:  1992-10       Impact factor: 4.272

10.  Requirements for U2 snRNP addition to yeast pre-mRNA.

Authors:  X C Liao; H V Colot; Y Wang; M Rosbash
Journal:  Nucleic Acids Res       Date:  1992-08-25       Impact factor: 16.971

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