Literature DB >> 21698377

Application of the bacteriophage Mu-driven system for the integration/amplification of target genes in the chromosomes of engineered Gram-negative bacteria--mini review.

Valerii Z Akhverdyan1, Evgueni R Gak, Irina L Tokmakova, Nataliya V Stoynova, Yurgis A V Yomantas, Sergey V Mashko.   

Abstract

The advantages of phage Mu transposition-based systems for the chromosomal editing of plasmid-less strains are reviewed. The cis and trans requirements for Mu phage-mediated transposition, which include the L/R ends of the Mu DNA, the transposition factors MuA and MuB, and the cis/trans functioning of the E element as an enhancer, are presented. Mini-Mu(LR)/(LER) units are Mu derivatives that lack most of the Mu genes but contain the L/R ends or a properly arranged E element in cis to the L/R ends. The dual-component system, which consists of an integrative plasmid with a mini-Mu and an easily eliminated helper plasmid encoding inducible transposition factors, is described in detail as a tool for the integration/amplification of recombinant DNAs. This chromosomal editing method is based on replicative transposition through the formation of a cointegrate that can be resolved in a recombination-dependent manner. (E-plus)- or (E-minus)-helpers that differ in the presence of the trans-acting E element are used to achieve the proper mini-Mu transposition intensity. The systems that have been developed for the construction of stably maintained mini-Mu multi-integrant strains of Escherichia coli and Methylophilus methylotrophus are described. A novel integration/amplification/fixation strategy is proposed for consecutive independent replicative transpositions of different mini-Mu(LER) units with "excisable" E elements in methylotrophic cells.

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Year:  2011        PMID: 21698377      PMCID: PMC3145075          DOI: 10.1007/s00253-011-3416-y

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  121 in total

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Journal:  Adv Biochem Eng Biotechnol       Date:  2004       Impact factor: 2.635

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Authors:  Keith E J Tyo; Parayil Kumaran Ajikumar; Gregory Stephanopoulos
Journal:  Nat Biotechnol       Date:  2009-07-26       Impact factor: 54.908

9.  Conditional silencing of the Escherichia coli pykF gene results from artificial convergent transcription protected from Rho-dependent termination.

Authors:  Alexander A Krylov; Larisa G Airich; Evgeniya M Kiseleva; Natalia I Minaeva; Irina V Biryukova; Sergey V Mashko
Journal:  J Mol Microbiol Biotechnol       Date:  2010-01-06

10.  Amino Acid Production from Methanol by Methylobacillus glycogenes Mutants: Isolation of L-Glutamic Acid Hyper-producing Mutants from M. glycogenes Strains, and Derivation of L-Threonine and L-Lysine-producing Mutants from Them.

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Journal:  Biosci Biotechnol Biochem       Date:  1993-01       Impact factor: 2.043

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  8 in total

1.  A novel transposable Mu-like prophage in Bacillus alcalophilus CGMCC 1.3604 (ATCC 27647).

Authors:  Junjie Yang; Yimeng Kong; Xuan Li; Sheng Yang
Journal:  Virol Sin       Date:  2015-02       Impact factor: 4.327

Review 2.  Coevolution of bacteria and their viruses.

Authors:  František Golais; Jaroslav Hollý; Jana Vítkovská
Journal:  Folia Microbiol (Praha)       Date:  2012-09-21       Impact factor: 2.099

Review 3.  Transposable Phage Mu.

Authors:  Rasika M Harshey
Journal:  Microbiol Spectr       Date:  2014-10

4.  Flexibility in MuA transposase family protein structures: functional mapping with scanning mutagenesis and sequence alignment of protein homologues.

Authors:  Tiina S Rasila; Mauno Vihinen; Lars Paulin; Saija Haapa-Paananen; Harri Savilahti
Journal:  PLoS One       Date:  2012-05-29       Impact factor: 3.240

5.  Knock-in/Knock-out (KIKO) vectors for rapid integration of large DNA sequences, including whole metabolic pathways, onto the Escherichia coli chromosome at well-characterised loci.

Authors:  Suriana Sabri; Jennifer A Steen; Mareike Bongers; Lars K Nielsen; Claudia E Vickers
Journal:  Microb Cell Fact       Date:  2013-06-24       Impact factor: 5.328

Review 6.  Emulating interactions between microorganisms and tumor microenvironment to develop cancer theranostics.

Authors:  Tongmeng Jiang; Tao Yang; Yingfan Chen; Yao Miao; Yajing Xu; Honglin Jiang; Mingying Yang; Chuanbin Mao
Journal:  Theranostics       Date:  2022-03-14       Impact factor: 11.600

7.  Multicopy integration of mini-Tn7 transposons into selected chromosomal sites of a Salmonella vaccine strain.

Authors:  Karen Roos; Esther Werner; Holger Loessner
Journal:  Microb Biotechnol       Date:  2014-12-09       Impact factor: 5.813

8.  Mu-driven transposition of recombinant mini-Mu unit DNA in the Corynebacterium glutamicum chromosome.

Authors:  Natalya V Gorshkova; Juliya S Lobanova; Irina L Tokmakova; Sergey V Smirnov; Valerii Z Akhverdyan; Alexander A Krylov; Sergey V Mashko
Journal:  Appl Microbiol Biotechnol       Date:  2018-02-01       Impact factor: 4.813

  8 in total

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