Literature DB >> 21690406

Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor.

Mary O'Connell Motherway1, Aldert Zomer, Sinead C Leahy, Justus Reunanen, Francesca Bottacini, Marcus J Claesson, Frances O'Brien, Kiera Flynn, Patrick G Casey, Jose Antonio Moreno Munoz, Breda Kearney, Aileen M Houston, Caitlin O'Mahony, Des G Higgins, Fergus Shanahan, Airi Palva, Willem M de Vos, Gerald F Fitzgerald, Marco Ventura, Paul W O'Toole, Douwe van Sinderen.   

Abstract

Development of the human gut microbiota commences at birth, with bifidobacteria being among the first colonizers of the sterile newborn gastrointestinal tract. To date, the genetic basis of Bifidobacterium colonization and persistence remains poorly understood. Transcriptome analysis of the Bifidobacterium breve UCC2003 2.42-Mb genome in a murine colonization model revealed differential expression of a type IVb tight adherence (Tad) pilus-encoding gene cluster designated "tad(2003)." Mutational analysis demonstrated that the tad(2003) gene cluster is essential for efficient in vivo murine gut colonization, and immunogold transmission electron microscopy confirmed the presence of Tad pili at the poles of B. breve UCC2003 cells. Conservation of the Tad pilus-encoding locus among other B. breve strains and among sequenced Bifidobacterium genomes supports the notion of a ubiquitous pili-mediated host colonization and persistence mechanism for bifidobacteria.

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Year:  2011        PMID: 21690406      PMCID: PMC3131351          DOI: 10.1073/pnas.1105380108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  56 in total

1.  Genome-wide detection and analysis of cell wall-bound proteins with LPxTG-like sorting motifs.

Authors:  Jos Boekhorst; Mark W H J de Been; Michiel Kleerebezem; Roland J Siezen
Journal:  J Bacteriol       Date:  2005-07       Impact factor: 3.490

Review 2.  The tad locus: postcards from the widespread colonization island.

Authors:  Mladen Tomich; Paul J Planet; David H Figurski
Journal:  Nat Rev Microbiol       Date:  2007-05       Impact factor: 60.633

Review 3.  Cadherins: a molecular family important in selective cell-cell adhesion.

Authors:  M Takeichi
Journal:  Annu Rev Biochem       Date:  1990       Impact factor: 23.643

4.  Screening for and identification of starch-, amylopectin-, and pullulan-degrading activities in bifidobacterial strains.

Authors:  Sinéad M Ryan; Gerald F Fitzgerald; Douwe van Sinderen
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

5.  Examination of faecal Bifidobacterium populations in breast- and formula-fed infants during the first 18 months of life.

Authors:  Laure C Roger; Adele Costabile; Diane T Holland; Lesley Hoyles; Anne L McCartney
Journal:  Microbiology       Date:  2010-09-23       Impact factor: 2.777

6.  The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract.

Authors:  Mark A Schell; Maria Karmirantzou; Berend Snel; David Vilanova; Bernard Berger; Gabriella Pessi; Marie-Camille Zwahlen; Frank Desiere; Peer Bork; Michele Delley; R David Pridmore; Fabrizio Arigoni
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-15       Impact factor: 11.205

7.  Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns.

Authors:  Maria G Dominguez-Bello; Elizabeth K Costello; Monica Contreras; Magda Magris; Glida Hidalgo; Noah Fierer; Rob Knight
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-21       Impact factor: 11.205

8.  Nucleotide sequences and operon structure of plasmid-borne genes mediating uptake and utilization of raffinose in Escherichia coli.

Authors:  C Aslanidis; K Schmid; R Schmitt
Journal:  J Bacteriol       Date:  1989-12       Impact factor: 3.490

9.  Genomic and metabolic studies of the impact of probiotics on a model gut symbiont and host.

Authors:  Justin L Sonnenburg; Christina T L Chen; Jeffrey I Gordon
Journal:  PLoS Biol       Date:  2006-11       Impact factor: 8.029

10.  Development of a luciferase-based reporter system to monitor Bifidobacterium breve UCC2003 persistence in mice.

Authors:  Michelle Cronin; Roy D Sleator; Colin Hill; Gerald F Fitzgerald; Douwe van Sinderen
Journal:  BMC Microbiol       Date:  2008-09-24       Impact factor: 3.605

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  161 in total

1.  Genome sequence of Bifidobacterium breve DPC 6330, a strain isolated from the human intestine.

Authors:  Caitriona M Guinane; Eoin Barrett; Gerald F Fitzgerald; Douwe van Sinderen; R Paul Ross; Catherine Stanton
Journal:  J Bacteriol       Date:  2011-12       Impact factor: 3.490

2.  Discovering novel bile protection systems in Bifidobacterium breve UCC2003 through functional genomics.

Authors:  Lorena Ruiz; Aldert Zomer; Mary O'Connell-Motherway; Douwe van Sinderen; Abelardo Margolles
Journal:  Appl Environ Microbiol       Date:  2011-12-09       Impact factor: 4.792

Review 3.  Probiogenomics as a tool to obtain genetic insights into adaptation of probiotic bacteria to the human gut.

Authors:  Marco Ventura; Francesca Turroni; Douwe van Sinderen
Journal:  Bioeng Bugs       Date:  2012-03-01

4.  Bifidobacterial surface-exopolysaccharide facilitates commensal-host interaction through immune modulation and pathogen protection.

Authors:  Saranna Fanning; Lindsay J Hall; Michelle Cronin; Aldert Zomer; John MacSharry; David Goulding; Mary O'Connell Motherway; Fergus Shanahan; Kenneth Nally; Gordon Dougan; Douwe van Sinderen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-23       Impact factor: 11.205

5.  Global genome transcription profiling of Bifidobacterium bifidum PRL2010 under in vitro conditions and identification of reference genes for quantitative real-time PCR.

Authors:  Francesca Turroni; Elena Foroni; Barbara Montanini; Alice Viappiani; Francesco Strati; Sabrina Duranti; Alberto Ferrarini; Massimo Delledonne; Douwe van Sinderen; Marco Ventura
Journal:  Appl Environ Microbiol       Date:  2011-10-14       Impact factor: 4.792

6.  Extracellular Vesicles Produced by Bifidobacterium longum Export Mucin-Binding Proteins.

Authors:  Keita Nishiyama; Takashi Takaki; Makoto Sugiyama; Itsuko Fukuda; Maho Aiso; Takao Mukai; Toshitaka Odamaki; Jin-Zhong Xiao; Ro Osawa; Nobuhiko Okada
Journal:  Appl Environ Microbiol       Date:  2020-09-17       Impact factor: 4.792

7.  Expression of fluorescent proteins in bifidobacteria for analysis of host-microbe interactions.

Authors:  Verena Grimm; Marita Gleinser; Caroline Neu; Daria Zhurina; Christian U Riedel
Journal:  Appl Environ Microbiol       Date:  2014-02-28       Impact factor: 4.792

8.  Metabolism of sialic acid by Bifidobacterium breve UCC2003.

Authors:  Muireann Egan; Mary O'Connell Motherway; Marco Ventura; Douwe van Sinderen
Journal:  Appl Environ Microbiol       Date:  2014-05-09       Impact factor: 4.792

9.  Dissecting the Evolutionary Development of the Species Bifidobacterium animalis through Comparative Genomics Analyses.

Authors:  Gabriele Andrea Lugli; Walter Mancino; Christian Milani; Sabrina Duranti; Leonardo Mancabelli; Stefania Napoli; Marta Mangifesta; Alice Viappiani; Rosaria Anzalone; Giulia Longhi; Douwe van Sinderen; Marco Ventura; Francesca Turroni
Journal:  Appl Environ Microbiol       Date:  2019-03-22       Impact factor: 4.792

10.  A two-component regulatory system controls autoregulated serpin expression in Bifidobacterium breve UCC2003.

Authors:  Pablo Alvarez-Martin; Mary O'Connell Motherway; Francesca Turroni; Elena Foroni; Marco Ventura; Douwe van Sinderen
Journal:  Appl Environ Microbiol       Date:  2012-07-27       Impact factor: 4.792

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