Literature DB >> 22072651

Genome sequence of Bifidobacterium breve DPC 6330, a strain isolated from the human intestine.

Caitriona M Guinane1, Eoin Barrett, Gerald F Fitzgerald, Douwe van Sinderen, R Paul Ross, Catherine Stanton.   

Abstract

The draft genome of Bifidobacterium breve DPC 6330, isolated from an elderly patient, was determined. B. breve DPC 6330 was previously identified to synthesize the beneficial metabolite conjugated linoleic acid from free linoleic acid. The sequence will allow identification and characterization of the genetic determinants of its putative beneficial properties.

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Year:  2011        PMID： 22072651      PMCID： PMC3232891          DOI： 10.1128/JB.06196-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  15 in total

1.  GAMOLA: a new local solution for sequence annotation and analyzing draft and finished prokaryotic genomes.

Authors:  Eric Altermann; Todd R Klaenhammer
Journal:  OMICS       Date:  2003

Review 2.  Effect of conjugated linoleic acid on body composition and plasma lipids in humans: an overview of the literature.

Authors:  Antonius H M Terpstra
Journal:  Am J Clin Nutr       Date:  2004-03       Impact factor: 7.045

3.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

4.  ACT: the Artemis Comparison Tool.

Authors:  Tim J Carver; Kim M Rutherford; Matthew Berriman; Marie-Adele Rajandream; Barclay G Barrell; Julian Parkhill
Journal:  Bioinformatics       Date:  2005-06-23       Impact factor: 6.937

5.  Rapid screening method for analyzing the conjugated linoleic acid production capabilities of bacterial cultures.

Authors:  E Barrett; R P Ross; G F Fitzgerald; C Stanton
Journal:  Appl Environ Microbiol       Date:  2007-02-02       Impact factor: 4.792

6.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

7.  Analyzing patterns of microbial evolution using the mauve genome alignment system.

Authors:  Aaron E Darling; Todd J Treangen; Xavier Messeguer; Nicole T Perna
Journal:  Methods Mol Biol       Date:  2007

Review 8.  Cell signal mechanisms, conjugated linoleic acids (CLAs) and anti-tumorigenesis.

Authors:  K W J Wahle; S D Heys
Journal:  Prostaglandins Leukot Essent Fatty Acids       Date:  2002 Aug-Sep       Impact factor: 4.006

9.  Conjugated linoleic acid supplementation for 1 y reduces body fat mass in healthy overweight humans.

Authors:  Jean-Michel Gaullier; Johan Halse; Kjetil Høye; Knut Kristiansen; Hans Fagertun; Hogne Vik; Ola Gudmundsen
Journal:  Am J Clin Nutr       Date:  2004-06       Impact factor: 7.045

10.  The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes.

Authors:  Ross Overbeek; Tadhg Begley; Ralph M Butler; Jomuna V Choudhuri; Han-Yu Chuang; Matthew Cohoon; Valérie de Crécy-Lagard; Naryttza Diaz; Terry Disz; Robert Edwards; Michael Fonstein; Ed D Frank; Svetlana Gerdes; Elizabeth M Glass; Alexander Goesmann; Andrew Hanson; Dirk Iwata-Reuyl; Roy Jensen; Neema Jamshidi; Lutz Krause; Michael Kubal; Niels Larsen; Burkhard Linke; Alice C McHardy; Folker Meyer; Heiko Neuweger; Gary Olsen; Robert Olson; Andrei Osterman; Vasiliy Portnoy; Gordon D Pusch; Dmitry A Rodionov; Christian Rückert; Jason Steiner; Rick Stevens; Ines Thiele; Olga Vassieva; Yuzhen Ye; Olga Zagnitko; Veronika Vonstein
Journal:  Nucleic Acids Res       Date:  2005-10-07       Impact factor: 16.971
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  3 in total

Review 1.  Microbiota-mediated colonization resistance against intestinal pathogens.

Authors:  Charlie G Buffie; Eric G Pamer
Journal:  Nat Rev Immunol       Date:  2013-10-07       Impact factor: 53.106

2.  A Small Molecule-Screening Pipeline to Evaluate the Therapeutic Potential of 2-Aminoimidazole Molecules Against Clostridium difficile.

Authors:  Rajani Thanissery; Daina Zeng; Raul G Doyle; Casey M Theriot
Journal:  Front Microbiol       Date:  2018-06-06       Impact factor: 5.640

3.  Bifidobacterium breve with α-linolenic acid and linoleic acid alters fatty acid metabolism in the maternal separation model of irritable bowel syndrome.

Authors:  Eoin Barrett; Patrick Fitzgerald; Timothy G Dinan; John F Cryan; R Paul Ross; Eamonn M Quigley; Fergus Shanahan; Barry Kiely; Gerald F Fitzgerald; Paul W O'Toole; Catherine Stanton
Journal:  PLoS One       Date:  2012-11-20       Impact factor: 3.240
  3 in total

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