Literature DB >> 16885278

Screening for and identification of starch-, amylopectin-, and pullulan-degrading activities in bifidobacterial strains.

Sinéad M Ryan1, Gerald F Fitzgerald, Douwe van Sinderen.   

Abstract

Forty-two bifidobacterial strains were screened for alpha-amylase and/or pullulanase activity by investigating their capacities to utilize starch, amylopectin, or pullulan. Of the 42 bifidobacterial strains tested, 19 were capable of degrading potato starch. Of these 19 strains, 11 were able to degrade starch and amylopectin, as well as pullulan. These 11 strains, which were shown to produce extracellular starch-degrading activities, included 5 strains of Bifidobacterium breve, 1 B. dentium strain, 1 B. infantis strain, 3 strains of B. pseudolongum, and 1 strain of B. thermophilum. Quantitative and qualitative enzyme activities were determined by measuring the concentrations of released reducing sugars and by high-performance thin-layer chromatography, respectively. These analyses confirmed both the inducible nature and the extracellular nature of the starch- and pullulan-degrading enzyme activities and showed that the five B. breve strains produced an activity that is consistent with type II pullulanase (amylopullulanase) activity, while the remaining six strains produced an activity with properties that resemble those of type III pullulan hydrolase.

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Year:  2006        PMID: 16885278      PMCID: PMC1538741          DOI: 10.1128/AEM.00257-06

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  38 in total

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Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

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Journal:  Biochem J       Date:  1991-12-01       Impact factor: 3.857

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Journal:  J Gen Microbiol       Date:  1990-03

5.  Separation of functional domains for the alpha-1,4 and alpha-1,6 hydrolytic activities of a Bacillus amylopullulanase by limited proteolysis with papain.

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Journal:  Biosci Biotechnol Biochem       Date:  1996-04       Impact factor: 2.043

6.  Faecal short chain fatty acids in breast-fed and formula-fed babies.

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Journal:  Acta Paediatr       Date:  1994-05       Impact factor: 2.299

7.  Sequencing of the amylopullulanase (apu) gene of Thermoanaerobacter ethanolicus 39E, and identification of the active site by site-directed mutagenesis.

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Journal:  J Biol Chem       Date:  1993-08-05       Impact factor: 5.157

8.  Purification and characterization of an alkaline amylopullulanase with both alpha-1,4 and alpha-1,6 hydrolytic activity from alkalophilic Bacillus sp. KSM-1378.

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Journal:  Biochim Biophys Acta       Date:  1995-04-13

9.  Substrate specificity and detailed characterization of a bifunctional amylase-pullulanase enzyme from Bacillus circulans F-2 having two different active sites on one polypeptide.

Authors:  C H Kim; Y S Kim
Journal:  Eur J Biochem       Date:  1995-02-01

10.  Enzyme-resistant fractions of beans lowered serum cholesterol and increased sterol excretions and hepatic mRNA levels in rats.

Authors:  Kyu-Ho Han; Michihiro Fukushima; Teruhiko Kato; Michiyuki Kojima; Kiyoshi Ohba; Ken-ichiro Shimada; Mitsuo Sekikawa; Masuo Nakano
Journal:  Lipids       Date:  2003-09       Impact factor: 1.880

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  54 in total

Review 1.  Probiogenomics as a tool to obtain genetic insights into adaptation of probiotic bacteria to the human gut.

Authors:  Marco Ventura; Francesca Turroni; Douwe van Sinderen
Journal:  Bioeng Bugs       Date:  2012-03-01

Review 2.  Genome-scale analyses of health-promoting bacteria: probiogenomics.

Authors:  Marco Ventura; Sarah O'Flaherty; Marcus J Claesson; Francesca Turroni; Todd R Klaenhammer; Douwe van Sinderen; Paul W O'Toole
Journal:  Nat Rev Microbiol       Date:  2008-11-24       Impact factor: 60.633

3.  Characterization of two novel alpha-glucosidases from Bifidobacterium breve UCC2003.

Authors:  Karina Pokusaeva; Mary O'Connell-Motherway; Aldert Zomer; Gerald F Fitzgerald; Douwe van Sinderen
Journal:  Appl Environ Microbiol       Date:  2008-12-29       Impact factor: 4.792

4.  Complete genome sequence of Bifidobacterium adolescentis P2P3, a human gut bacterium possessing strong resistant starch-degrading activity.

Authors:  Dong-Hyun Jung; Won-Hyong Chung; Dong-Ho Seo; Ye-Jin Kim; Young-Do Nam; Cheon-Seok Park
Journal:  3 Biotech       Date:  2020-01-07       Impact factor: 2.406

Review 5.  Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum.

Authors:  Marco Ventura; Carlos Canchaya; Andreas Tauch; Govind Chandra; Gerald F Fitzgerald; Keith F Chater; Douwe van Sinderen
Journal:  Microbiol Mol Biol Rev       Date:  2007-09       Impact factor: 11.056

6.  Genomic characterization and transcriptional studies of the starch-utilizing strain Bifidobacterium adolescentis 22L.

Authors:  Sabrina Duranti; Francesca Turroni; Gabriele Andrea Lugli; Christian Milani; Alice Viappiani; Marta Mangifesta; Laura Gioiosa; Paola Palanza; Douwe van Sinderen; Marco Ventura
Journal:  Appl Environ Microbiol       Date:  2014-07-25       Impact factor: 4.792

7.  Carbohydrate metabolism in Bifidobacteria.

Authors:  Karina Pokusaeva; Gerald F Fitzgerald; Douwe van Sinderen
Journal:  Genes Nutr       Date:  2011-02-16       Impact factor: 5.523

8.  Metabolism of sialic acid by Bifidobacterium breve UCC2003.

Authors:  Muireann Egan; Mary O'Connell Motherway; Marco Ventura; Douwe van Sinderen
Journal:  Appl Environ Microbiol       Date:  2014-05-09       Impact factor: 4.792

9.  Mixed-species genomic microarray analysis of fecal samples reveals differential transcriptional responses of bifidobacteria in breast- and formula-fed infants.

Authors:  Eline S Klaassens; Rolf J Boesten; Monique Haarman; Jan Knol; Frank H Schuren; Elaine E Vaughan; Willem M de Vos
Journal:  Appl Environ Microbiol       Date:  2009-03-13       Impact factor: 4.792

Review 10.  The First Microbial Colonizers of the Human Gut: Composition, Activities, and Health Implications of the Infant Gut Microbiota.

Authors:  Christian Milani; Sabrina Duranti; Francesca Bottacini; Eoghan Casey; Francesca Turroni; Jennifer Mahony; Clara Belzer; Susana Delgado Palacio; Silvia Arboleya Montes; Leonardo Mancabelli; Gabriele Andrea Lugli; Juan Miguel Rodriguez; Lars Bode; Willem de Vos; Miguel Gueimonde; Abelardo Margolles; Douwe van Sinderen; Marco Ventura
Journal:  Microbiol Mol Biol Rev       Date:  2017-11-08       Impact factor: 11.056

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