Literature DB >> 21690349

Fluid dynamics and noise in bacterial cell-cell and cell-surface scattering.

Knut Drescher1, Jörn Dunkel, Luis H Cisneros, Sujoy Ganguly, Raymond E Goldstein.   

Abstract

Bacterial processes ranging from gene expression to motility and biofilm formation are constantly challenged by internal and external noise. While the importance of stochastic fluctuations has been appreciated for chemotaxis, it is currently believed that deterministic long-range fluid dynamical effects govern cell-cell and cell-surface scattering-the elementary events that lead to swarming and collective swimming in active suspensions and to the formation of biofilms. Here, we report direct measurements of the bacterial flow field generated by individual swimming Escherichia coli both far from and near to a solid surface. These experiments allowed us to examine the relative importance of fluid dynamics and rotational diffusion for bacteria. For cell-cell interactions it is shown that thermal and intrinsic stochasticity drown the effects of long-range fluid dynamics, implying that physical interactions between bacteria are determined by steric collisions and near-field lubrication forces. This dominance of short-range forces closely links collective motion in bacterial suspensions to self-organization in driven granular systems, assemblages of biofilaments, and animal flocks. For the scattering of bacteria with surfaces, long-range fluid dynamical interactions are also shown to be negligible before collisions; however, once the bacterium swims along the surface within a few microns after an aligning collision, hydrodynamic effects can contribute to the experimentally observed, long residence times. Because these results are based on purely mechanical properties, they apply to a wide range of microorganisms.

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Year:  2011        PMID: 21690349      PMCID: PMC3131322          DOI: 10.1073/pnas.1019079108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Large-scale collective properties of self-propelled rods.

Authors:  Francesco Ginelli; Fernando Peruani; Markus Bär; Hugues Chaté
Journal:  Phys Rev Lett       Date:  2010-05-04       Impact factor: 9.161

2.  Two-dimensional point singularity model of a low-Reynolds-number swimmer near a wall.

Authors:  Darren G Crowdy; Yizhar Or
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2010-03-11

Review 3.  Quorum sensing: cell-to-cell communication in bacteria.

Authors:  Christopher M Waters; Bonnie L Bassler
Journal:  Annu Rev Cell Dev Biol       Date:  2005       Impact factor: 13.827

4.  Transport and collective dynamics in suspensions of confined swimming particles.

Authors:  Juan P Hernandez-Ortiz; Christopher G Stoltz; Michael D Graham
Journal:  Phys Rev Lett       Date:  2005-11-10       Impact factor: 9.161

5.  On torque and tumbling in swimming Escherichia coli.

Authors:  Nicholas C Darnton; Linda Turner; Svetlana Rojevsky; Howard C Berg
Journal:  J Bacteriol       Date:  2006-12-22       Impact factor: 3.490

6.  Concentration dependence of the collective dynamics of swimming bacteria.

Authors:  Andrey Sokolov; Igor S Aranson; John O Kessler; Raymond E Goldstein
Journal:  Phys Rev Lett       Date:  2007-04-11       Impact factor: 9.161

7.  Three-dimensional tracking of motile bacteria near a solid planar surface.

Authors:  P D Frymier; R M Ford; H C Berg; P T Cummings
Journal:  Proc Natl Acad Sci U S A       Date:  1995-06-20       Impact factor: 11.205

8.  Statistical mechanics and hydrodynamics of bacterial suspensions.

Authors:  Aparna Baskaran; M Cristina Marchetti
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-28       Impact factor: 11.205

9.  Hydrodynamic attraction of swimming microorganisms by surfaces.

Authors:  Allison P Berke; Linda Turner; Howard C Berg; Eric Lauga
Journal:  Phys Rev Lett       Date:  2008-07-17       Impact factor: 9.161

10.  Accumulation of microswimmers near a surface mediated by collision and rotational Brownian motion.

Authors:  Guanglai Li; Jay X Tang
Journal:  Phys Rev Lett       Date:  2009-08-12       Impact factor: 9.161

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  97 in total

Review 1.  Live from under the lens: exploring microbial motility with dynamic imaging and microfluidics.

Authors:  Kwangmin Son; Douglas R Brumley; Roman Stocker
Journal:  Nat Rev Microbiol       Date:  2015-12       Impact factor: 60.633

2.  Hotspots of boundary accumulation: dynamics and statistics of micro-swimmers in flowing films.

Authors:  Arnold J T M Mathijssen; Amin Doostmohammadi; Julia M Yeomans; Tyler N Shendruk
Journal:  J R Soc Interface       Date:  2016-02       Impact factor: 4.118

3.  Species-dependent hydrodynamics of flagellum-tethered bacteria in early biofilm development.

Authors:  Rachel R Bennett; Calvin K Lee; Jaime De Anda; Kenneth H Nealson; Fitnat H Yildiz; George A O'Toole; Gerard C L Wong; Ramin Golestanian
Journal:  J R Soc Interface       Date:  2016-02       Impact factor: 4.118

4.  A hydrodynamic mechanism for attraction of undulatory microswimmers to surfaces (bordertaxis).

Authors:  Jinzhou Yuan; David M Raizen; Haim H Bau
Journal:  J R Soc Interface       Date:  2015-08-06       Impact factor: 4.118

5.  Microgrooves and fluid flows provide preferential passageways for sperm over pathogen Tritrichomonas foetus.

Authors:  Chih-kuan Tung; Lian Hu; Alyssa G Fiore; Florencia Ardon; Dillon G Hickman; Robert O Gilbert; Susan S Suarez; Mingming Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-13       Impact factor: 11.205

6.  Correlation properties of collective motion in bacterial suspensions.

Authors:  Shawn D Ryan; Andrey Sokolov; Leonid Berlyand; Igor S Aranson
Journal:  New J Phys       Date:  2013-09       Impact factor: 3.729

7.  Tuning active emulsion dynamics via surfactants and topology.

Authors:  Shashi Thutupalli; Stephan Herminghaus
Journal:  Eur Phys J E Soft Matter       Date:  2013-08-29       Impact factor: 1.890

8.  Effective viscosity of puller-like microswimmers: a renormalization approach.

Authors:  Simon Gluzman; Dmitry A Karpeev; Leonid V Berlyand
Journal:  J R Soc Interface       Date:  2013-09-25       Impact factor: 4.118

9.  Modelling the fluid mechanics of cilia and flagella in reproduction and development.

Authors:  Thomas D Montenegro-Johnson; Andrew A Smith; David J Smith; Daniel Loghin; John R Blake
Journal:  Eur Phys J E Soft Matter       Date:  2012-10-29       Impact factor: 1.890

10.  Filaments in curved streamlines: Rapid formation of Staphylococcus aureus biofilm streamers.

Authors:  Minyoung Kevin Kim; Knut Drescher; On Shun Pak; Bonnie L Bassler; Howard A Stone
Journal:  New J Phys       Date:  2014-06-26       Impact factor: 3.729

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