Literature DB >> 21687532

The lysis cassette of bacteriophage ϕKMV encodes a signal-arrest-release endolysin and a pinholin.

Yves Briers1, Liesbet M Peeters, Guido Volckaert, Rob Lavigne.   

Abstract

The lysis cassette of Pseudomonas aeruginosa phage ϕKMV encodes a holin, endolysin, Rz and Rz1 in the canonical order. It has a tight organization with a high degree of overlapping genes and is highly conserved (between 96 and 100% identity at the protein level) among several other members of the "phiKMV-like viruses." The endolysin KMV45 exhibits characteristics as expected for a signal-arrest-release (SAR) endolysin, whereas the holin KMV44 is a typical pinholin. KMV45 is initially secreted as an inactive, membrane-anchored endolysin, which is subsequently released by membrane depolarization driven by the pinholin KMV44. The SAR domain of KMV45 is necessary for its full enzymatic activity, suggesting a refolding of the catalytic cleft upon release from the membrane. The physical proximity of the catalytic glutamic acid residue close to SAR domain suggests an alternative activation mechanism compared to the SAR endolysin of phages P1, ERA103 and 21. Expression of KMV44 leads to a quick cell lysis when paired with SAR endolysin KMV45, but not with the cytoplasmic phage λ endolysin, indicating the membrane depolarizing function of KMV44 rather than the large hole-making function characteristic of classical holins.

Entities:  

Year:  2011        PMID: 21687532      PMCID: PMC3109451          DOI: 10.4161/bact.1.1.14868

Source DB:  PubMed          Journal:  Bacteriophage        ISSN: 2159-7073


  23 in total

1.  A standardized approach for accurate quantification of murein hydrolase activity in high-throughput assays.

Authors:  Yves Briers; Rob Lavigne; Guido Volckaert; Kirsten Hertveldt
Journal:  J Biochem Biophys Methods       Date:  2006-11-10

2.  Genomic analysis of Pseudomonas aeruginosa phages LKD16 and LKA1: establishment of the phiKMV subgroup within the T7 supergroup.

Authors:  Pieter-Jan Ceyssens; Rob Lavigne; Wesley Mattheus; Andrew Chibeu; Kirsten Hertveldt; Jan Mast; Johan Robben; Guido Volckaert
Journal:  J Bacteriol       Date:  2006-10       Impact factor: 3.490

3.  Representational Difference Analysis (RDA) of bacteriophage genomes.

Authors:  Elke Lammens; Pieter-Jan Ceyssens; Marleen Voet; Kirsten Hertveldt; Rob Lavigne; Guido Volckaert
Journal:  J Microbiol Methods       Date:  2009-02-20       Impact factor: 2.363

4.  Unifying classical and molecular taxonomic classification: analysis of the Podoviridae using BLASTP-based tools.

Authors:  Rob Lavigne; Donald Seto; Padmanabhan Mahadevan; Hans-W Ackermann; Andrew M Kropinski
Journal:  Res Microbiol       Date:  2008-04-18       Impact factor: 3.992

5.  Structure of the lethal phage pinhole.

Authors:  Ting Pang; Christos G Savva; Karen G Fleming; Douglas K Struck; Ry Young
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-27       Impact factor: 11.205

6.  Regulation of a muralytic enzyme by dynamic membrane topology.

Authors:  Qingan Sun; Gabriel F Kuty; Arulandu Arockiasamy; Min Xu; Ry Young; James C Sacchettini
Journal:  Nat Struct Mol Biol       Date:  2009-11-01       Impact factor: 15.369

7.  Molecular analysis of the lysis protein Lys encoded by Lactobacillus plantarum phage phig1e.

Authors:  Makiko Kakikawa; Ken-ji Yokoi; Hisashi Kimoto; Masataka Nakano; Ken-Ichi Kawasaki; Akira Taketo; Ken-Ichi Kodaira
Journal:  Gene       Date:  2002-10-16       Impact factor: 3.688

8.  The N-terminal region of the Oenococcus oeni bacteriophage fOg44 lysin behaves as a bona fide signal peptide in Escherichia coli and as a cis-inhibitory element, preventing lytic activity on oenococcal cells.

Authors:  C São-José; R Parreira; G Vieira; M A Santos
Journal:  J Bacteriol       Date:  2000-10       Impact factor: 3.490

9.  The pinholin of lambdoid phage 21: control of lysis by membrane depolarization.

Authors:  Taehyun Park; Douglas K Struck; Chelsey A Dankenbring; Ry Young
Journal:  J Bacteriol       Date:  2007-09-07       Impact factor: 3.490

10.  A signal-arrest-release sequence mediates export and control of the phage P1 endolysin.

Authors:  Min Xu; Douglas K Struck; John Deaton; Ing-Nang Wang; Ry Young
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-16       Impact factor: 11.205

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  24 in total

1.  A Tailspike with Exopolysaccharide Depolymerase Activity from a New Providencia stuartii Phage Makes Multidrug-Resistant Bacteria Susceptible to Serum-Mediated Killing.

Authors:  Hugo Oliveira; Graça Pinto; Bruna Mendes; Oscar Dias; Hanne Hendrix; Ergun Akturk; Jean-Paul Noben; Jan Gawor; Małgorzata Łobocka; Rob Lavigne; Joana Azeredo
Journal:  Appl Environ Microbiol       Date:  2020-06-17       Impact factor: 4.792

2.  Molecular aspects and comparative genomics of bacteriophage endolysins.

Authors:  Hugo Oliveira; Luís D R Melo; Sílvio B Santos; Franklin L Nóbrega; Eugénio C Ferreira; Nuno Cerca; Joana Azeredo; Leon D Kluskens
Journal:  J Virol       Date:  2013-02-13       Impact factor: 5.103

3.  Novel Lytic Phages Protect Cells and Mice against Pseudomonas aeruginosa Infection.

Authors:  Feng Chen; Xingjun Cheng; Jianbo Li; Xiefang Yuan; Xiuhua Huang; Mao Lian; Wenfang Li; Tianfang Huang; Yaliu Xie; Jie Liu; Pan Gao; Xiawei Wei; Zhenling Wang; Min Wu
Journal:  J Virol       Date:  2021-01-20       Impact factor: 5.103

4.  Characterization of novel virulent broad-host-range phages of Xylella fastidiosa and Xanthomonas.

Authors:  Stephen J Ahern; Mayukh Das; Tushar Suvra Bhowmick; Ry Young; Carlos F Gonzalez
Journal:  J Bacteriol       Date:  2013-11-08       Impact factor: 3.490

5.  Investigation of a Large Collection of Pseudomonas aeruginosa Bacteriophages Collected from a Single Environmental Source in Abidjan, Côte d'Ivoire.

Authors:  Christiane Essoh; Libera Latino; Cédric Midoux; Yann Blouin; Guillaume Loukou; Simon-Pierre A Nguetta; Serge Lathro; Arsher Cablanmian; Athanase K Kouassi; Gilles Vergnaud; Christine Pourcel
Journal:  PLoS One       Date:  2015-06-26       Impact factor: 3.240

6.  A suggested new bacteriophage genus, "Kp34likevirus", within the Autographivirinae subfamily of Podoviridae.

Authors:  Harald Eriksson; Barbara Maciejewska; Agnieszka Latka; Grazyna Majkowska-Skrobek; Marios Hellstrand; Öjar Melefors; Jin-Town Wang; Andrew M Kropinski; Zuzanna Drulis-Kawa; Anders S Nilsson
Journal:  Viruses       Date:  2015-04-07       Impact factor: 5.048

Review 7.  Bacteriophages and phage-derived proteins--application approaches.

Authors:  Zuzanna Drulis-Kawa; Grazyna Majkowska-Skrobek; Barbara Maciejewska
Journal:  Curr Med Chem       Date:  2015       Impact factor: 4.530

Review 8.  Learning from bacteriophages - advantages and limitations of phage and phage-encoded protein applications.

Authors:  Zuzanna Drulis-Kawa; Grazyna Majkowska-Skrobek; Barbara Maciejewska; Anne-Sophie Delattre; Rob Lavigne
Journal:  Curr Protein Pept Sci       Date:  2012-12       Impact factor: 3.272

9.  Genomic characterization of JG068, a novel virulent podovirus active against Burkholderia cenocepacia.

Authors:  Karlene H Lynch; Ashraf H Abdu; Max Schobert; Jonathan J Dennis
Journal:  BMC Genomics       Date:  2013-08-27       Impact factor: 3.969

10.  Complete Genomic and Lysis-Cassette Characterization of the Novel Phage, KBNP1315, which Infects Avian Pathogenic Escherichia coli (APEC).

Authors:  Jung Seok Lee; Ho Bin Jang; Ki Sei Kim; Tae Hwan Kim; Se Pyeong Im; Si Won Kim; Jassy Mary S Lazarte; Jae Sung Kim; Tae Sung Jung
Journal:  PLoS One       Date:  2015-11-10       Impact factor: 3.240

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