Literature DB >> 21670277

Perturbation of thymocyte development in nonsense-mediated decay (NMD)-deficient mice.

Pamela A Frischmeyer-Guerrerio1, Robert A Montgomery, Daniel S Warren, Sara K Cooke, Johannes Lutz, Christopher J Sonnenday, Anthony L Guerrerio, Harry C Dietz.   

Abstract

The random nature of T-cell receptor-β (TCR-β) recombination needed to generate immunological diversity dictates that two-thirds of alleles will be out-of-frame. Transcripts derived from nonproductive rearrangements are cleared by the nonsense-mediated mRNA decay (NMD) pathway, the process by which cells selectively degrade transcripts harboring premature termination codons. Here, we demonstrate that the fetal thymus in transgenic mice that ubiquitously express a dominant-negative form of Rent1/hUpf1, an essential trans-effector of NMD, shows decreased cell number, reduced CD4CD8 double-positive thymocytes, diminished expression of TCR-β, and increased expression of CD25, suggesting a defect in pre-TCR signaling. Transgenic fetal thymocytes also demonstrated diminished endogenous Vβ-to-DβJβ rearrangements, whereas Dβ-to-Jβ rearrangements were unperturbed, suggesting that inhibition of NMD induces premature shut-off of TCR-β rearrangement. Developmental arrest of thymocytes is prevented by the introduction of a fully rearranged TCR-β transgene that precludes generation of out-of-frame transcripts, suggesting direct mRNA-mediated trans-dominant effects. These data document that NMD has been functionally incorporated into developmental programs during eukaryotic evolution.

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Year:  2011        PMID: 21670277      PMCID: PMC3127929          DOI: 10.1073/pnas.1019352108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  44 in total

1.  Immature thymocytes employ distinct signaling pathways for allelic exclusion versus differentiation and expansion.

Authors:  F Gärtner; F W Alt; R Monroe; M Chu; B P Sleckman; L Davidson; W Swat
Journal:  Immunity       Date:  1999-05       Impact factor: 31.745

2.  Initiation of allelic exclusion by stochastic interaction of Tcrb alleles with repressive nuclear compartments.

Authors:  Ryan J Schlimgen; Karen L Reddy; Harinder Singh; Michael S Krangel
Journal:  Nat Immunol       Date:  2008-06-08       Impact factor: 25.606

3.  Pro-B cells sense productive immunoglobulin heavy chain rearrangement irrespective of polypeptide production.

Authors:  Johannes Lutz; Marinus R Heideman; Edith Roth; Paul van den Berk; Werner Müller; Chander Raman; Matthias Wabl; Heinz Jacobs; Hans-Martin Jäck
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-13       Impact factor: 11.205

4.  Rent1, a trans-effector of nonsense-mediated mRNA decay, is essential for mammalian embryonic viability.

Authors:  S M Medghalchi; P A Frischmeyer; J T Mendell; A G Kelly; A M Lawler; H C Dietz
Journal:  Hum Mol Genet       Date:  2001-01-15       Impact factor: 6.150

5.  Human Upf proteins target an mRNA for nonsense-mediated decay when bound downstream of a termination codon.

Authors:  J Lykke-Andersen; M D Shu; J A Steitz
Journal:  Cell       Date:  2000-12-22       Impact factor: 41.582

6.  Yeast Upf proteins required for RNA surveillance affect global expression of the yeast transcriptome.

Authors:  M J Lelivelt; M R Culbertson
Journal:  Mol Cell Biol       Date:  1999-10       Impact factor: 4.272

7.  Identification and characterization of human orthologues to Saccharomyces cerevisiae Upf2 protein and Upf3 protein (Caenorhabditis elegans SMG-4).

Authors:  G Serin; A Gersappe; J D Black; R Aronoff; L E Maquat
Journal:  Mol Cell Biol       Date:  2001-01       Impact factor: 4.272

8.  Novel Upf2p orthologues suggest a functional link between translation initiation and nonsense surveillance complexes.

Authors:  J T Mendell; S M Medghalchi; R G Lake; E N Noensie; H C Dietz
Journal:  Mol Cell Biol       Date:  2000-12       Impact factor: 4.272

9.  Molecular mechanism for distinct neurological phenotypes conveyed by allelic truncating mutations.

Authors:  Ken Inoue; Mehrdad Khajavi; Tomoko Ohyama; Shin-ichi Hirabayashi; John Wilson; James D Reggin; Pedro Mancias; Ian J Butler; Miles F Wilkinson; Michael Wegner; James R Lupski
Journal:  Nat Genet       Date:  2004-03-07       Impact factor: 38.330

10.  NMD is essential for hematopoietic stem and progenitor cells and for eliminating by-products of programmed DNA rearrangements.

Authors:  Joachim Weischenfeldt; Inge Damgaard; David Bryder; Kim Theilgaard-Mönch; Lina A Thoren; Finn Cilius Nielsen; Sten Eirik W Jacobsen; Claus Nerlov; Bo Torben Porse
Journal:  Genes Dev       Date:  2008-05-15       Impact factor: 11.361

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  27 in total

1.  A conserved microRNA/NMD regulatory circuit controls gene expression.

Authors:  Rachid Karam; Miles Wilkinson
Journal:  RNA Biol       Date:  2012-01-01       Impact factor: 4.652

2.  Pro-B cells sense productive immunoglobulin heavy chain rearrangement irrespective of polypeptide production.

Authors:  Johannes Lutz; Marinus R Heideman; Edith Roth; Paul van den Berk; Werner Müller; Chander Raman; Matthias Wabl; Heinz Jacobs; Hans-Martin Jäck
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-13       Impact factor: 11.205

Review 3.  Long-Range Regulation of V(D)J Recombination.

Authors:  Charlotte Proudhon; Bingtao Hao; Ramya Raviram; Julie Chaumeil; Jane A Skok
Journal:  Adv Immunol       Date:  2015-08-20       Impact factor: 3.543

Review 4.  Post-transcriptional coordination of immunological responses by RNA-binding proteins.

Authors:  Panagiota Kafasla; Antonis Skliris; Dimitris L Kontoyiannis
Journal:  Nat Immunol       Date:  2014-06       Impact factor: 25.606

5.  Cross talk between immunoglobulin heavy-chain transcription and RNA surveillance during B cell development.

Authors:  Aurélien Tinguely; Guillaume Chemin; Sophie Péron; Christophe Sirac; Stéphane Reynaud; Michel Cogné; Laurent Delpy
Journal:  Mol Cell Biol       Date:  2011-10-28       Impact factor: 4.272

Review 6.  The regulation of mRNA stability in mammalian cells: 2.0.

Authors:  Xiangyue Wu; Gary Brewer
Journal:  Gene       Date:  2012-03-16       Impact factor: 3.688

Review 7.  Therapeutics based on stop codon readthrough.

Authors:  Kim M Keeling; Xiaojiao Xue; Gwen Gunn; David M Bedwell
Journal:  Annu Rev Genomics Hum Genet       Date:  2014-04-18       Impact factor: 8.929

Review 8.  Nonsense-mediated decay in genetic disease: friend or foe?

Authors:  Jake N Miller; David A Pearce
Journal:  Mutat Res Rev Mutat Res       Date:  2014-05-28       Impact factor: 5.657

9.  The identification of additional zebrafish DICP genes reveals haplotype variation and linkage to MHC class I genes.

Authors:  Ivan Rodriguez-Nunez; Dustin J Wcisel; Ronda T Litman; Gary W Litman; Jeffrey A Yoder
Journal:  Immunogenetics       Date:  2016-01-22       Impact factor: 2.846

Review 10.  Exploring the RNA world in hematopoietic cells through the lens of RNA-binding proteins.

Authors:  Joan Yuan; Stefan A Muljo
Journal:  Immunol Rev       Date:  2013-05       Impact factor: 12.988

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