Literature DB >> 21660052

Epigenetics of haematopoietic cell development.

Howard Cedar1, Yehudit Bergman.   

Abstract

Cells of the immune system are generated through a developmental cascade that begins in haematopoietic stem cells. During this process, gene expression patterns are programmed in a series of stages that bring about the restriction of cell potential, ultimately leading to the formation of specialized innate immune cells and mature lymphocytes that express antigen receptors. These events involve the regulation of both gene expression and DNA recombination, mainly through the control of chromatin accessibility. In this Review, we describe the epigenetic changes that mediate this complex differentiation process and try to understand the logic of the programming mechanism.

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Year:  2011        PMID: 21660052     DOI: 10.1038/nri2991

Source DB:  PubMed          Journal:  Nat Rev Immunol        ISSN: 1474-1733            Impact factor:   53.106


  136 in total

1.  Nonequivalent nuclear location of immunoglobulin alleles in B lymphocytes.

Authors:  J A Skok; K E Brown; V Azuara; M L Caparros; J Baxter; K Takacs; N Dillon; D Gray; R P Perry; M Merkenschlager; A G Fisher
Journal:  Nat Immunol       Date:  2001-09       Impact factor: 25.606

2.  A common genetic mechanism in malignant bone marrow diseases.

Authors:  Ross L Levine; Martin Carroll
Journal:  N Engl J Med       Date:  2009-05-28       Impact factor: 91.245

3.  Flk2+ common lymphoid progenitors possess equivalent differentiation potential for the B and T lineages.

Authors:  Holger Karsunky; Matthew A Inlay; Thomas Serwold; Deepta Bhattacharya; Irving L Weissman
Journal:  Blood       Date:  2008-04-18       Impact factor: 22.113

4.  C mu-containing transcripts initiate heterogeneously within the IgH enhancer region and contain a novel 5'-nontranslatable exon.

Authors:  G G Lennon; R P Perry
Journal:  Nature       Date:  1985 Dec 5-11       Impact factor: 49.962

5.  Impaired immunoglobulin gene rearrangement in mice lacking the IL-7 receptor.

Authors:  A E Corcoran; A Riddell; D Krooshoop; A R Venkitaraman
Journal:  Nature       Date:  1998-02-26       Impact factor: 49.962

Review 6.  Cytidine deaminases: AIDing DNA demethylation?

Authors:  Eric L Fritz; F Nina Papavasiliou
Journal:  Genes Dev       Date:  2010-10-01       Impact factor: 11.361

7.  Global mapping of H3K4me3 and H3K27me3 reveals specificity and plasticity in lineage fate determination of differentiating CD4+ T cells.

Authors:  Gang Wei; Lai Wei; Jinfang Zhu; Chongzhi Zang; Jane Hu-Li; Zhengju Yao; Kairong Cui; Yuka Kanno; Tae-Young Roh; Wendy T Watford; Dustin E Schones; Weiqun Peng; Hong-Wei Sun; William E Paul; John J O'Shea; Keji Zhao
Journal:  Immunity       Date:  2009-01-16       Impact factor: 31.745

8.  Sp1 elements protect a CpG island from de novo methylation.

Authors:  M Brandeis; D Frank; I Keshet; Z Siegfried; M Mendelsohn; A Nemes; V Temper; A Razin; H Cedar
Journal:  Nature       Date:  1994-09-29       Impact factor: 49.962

9.  Yin Yang 1 is a critical regulator of B-cell development.

Authors:  Huifei Liu; Marc Schmidt-Supprian; Yujiang Shi; Elias Hobeika; Natasha Barteneva; Hassan Jumaa; Roberta Pelanda; Michael Reth; Jane Skok; Klaus Rajewsky; Yang Shi
Journal:  Genes Dev       Date:  2007-05-15       Impact factor: 11.361

10.  Monoallelic expression of multiple genes in the CNS.

Authors:  Jinhui Wang; Zuzana Valo; David Smith; Judith Singer-Sam
Journal:  PLoS One       Date:  2007-12-12       Impact factor: 3.240

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  81 in total

Review 1.  Making the case for chromatin profiling: a new tool to investigate the immune-regulatory landscape.

Authors:  Deborah R Winter; Steffen Jung; Ido Amit
Journal:  Nat Rev Immunol       Date:  2015-08-14       Impact factor: 53.106

2.  Baseline Chromatin Modification Levels May Predict Interindividual Variability in Ozone-Induced Gene Expression.

Authors:  Shaun D McCullough; Emma C Bowers; Doan M On; David S Morgan; Lisa A Dailey; Ronald N Hines; Robert B Devlin; David Diaz-Sanchez
Journal:  Toxicol Sci       Date:  2015-12-29       Impact factor: 4.849

Review 3.  Epigenetic choreography of stem cells: the DNA demethylation episode of development.

Authors:  Swayamsiddha Kar; Sabnam Parbin; Moonmoon Deb; Arunima Shilpi; Dipta Sengupta; Sandip Kumar Rath; Madhumita Rakshit; Aditi Patra; Samir Kumar Patra
Journal:  Cell Mol Life Sci       Date:  2013-10-10       Impact factor: 9.261

4.  Guest editorial: Epigenetics of hematopoiesis and hematological malignancies.

Authors:  Atsushi Iwama
Journal:  Int J Hematol       Date:  2012-09-27       Impact factor: 2.490

5.  Sin3a-associated Hdac1 and Hdac2 are essential for hematopoietic stem cell homeostasis and contribute differentially to hematopoiesis.

Authors:  Marinus R Heideman; Cesare Lancini; Natalie Proost; Eva Yanover; Heinz Jacobs; Jan-Hermen Dannenberg
Journal:  Haematologica       Date:  2014-04-24       Impact factor: 9.941

6.  Epigenetic reprogramming induces the expansion of cord blood stem cells.

Authors:  Pratima Chaurasia; David C Gajzer; Christoph Schaniel; Sunita D'Souza; Ronald Hoffman
Journal:  J Clin Invest       Date:  2014-04-24       Impact factor: 14.808

7.  Identification of DNA methylation changes at cis-regulatory elements during early steps of HSC differentiation using tagmentation-based whole genome bisulfite sequencing.

Authors:  Daniel B Lipka; Qi Wang; Nina Cabezas-Wallscheid; Daniel Klimmeck; Dieter Weichenhan; Carl Herrmann; Amelie Lier; David Brocks; Lisa von Paleske; Simon Renders; Peer Wünsche; Petra Zeisberger; Lei Gu; Simon Haas; Marieke Ag Essers; Benedikt Brors; Roland Eils; Andreas Trumpp; Michael D Milsom; Christoph Plass
Journal:  Cell Cycle       Date:  2014       Impact factor: 4.534

Review 8.  Genomic and epigenomic heterogeneity in chronic lymphocytic leukemia.

Authors:  Romain Guièze; Catherine J Wu
Journal:  Blood       Date:  2015-06-11       Impact factor: 22.113

9.  Epigenomics and the microbiota.

Authors:  Theresa Alenghat
Journal:  Toxicol Pathol       Date:  2014-10-20       Impact factor: 1.902

10.  3D trajectories adopted by coding and regulatory DNA elements: first-passage times for genomic interactions.

Authors:  Joseph S Lucas; Yaojun Zhang; Olga K Dudko; Cornelis Murre
Journal:  Cell       Date:  2014-07-03       Impact factor: 41.582

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