Literature DB >> 21656009

Exact and approximate distributions of protein and mRNA levels in the low-copy regime of gene expression.

Pavol Bokes1, John R King, Andrew T A Wood, Matthew Loose.   

Abstract

Gene expression at the single-cell level incorporates reaction mechanisms which are intrinsically stochastic as they involve molecular species present at low copy numbers. The dynamics of these mechanisms can be described quantitatively using stochastic master-equation modelling; in this paper we study a generic gene-expression model of this kind which explicitly includes the representations of the processes of transcription and translation. For this model we determine the generating function of the steady-state distribution of mRNA and protein counts and characterise the underlying probability law using a combination of analytic, asymptotic and numerical approaches, finding that the distribution may assume a number of qualitatively distinct forms. The results of the analysis are suitable for comparison with single-molecule resolution gene-expression data emerging from recent experimental studies.

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Year:  2011        PMID: 21656009     DOI: 10.1007/s00285-011-0433-5

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


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  17 in total

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7.  Path integral approach to generating functions for multistep post-transcription and post-translation processes and arbitrary initial conditions.

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