Literature DB >> 21653196

Parameters affecting telomere-mediated chromosomal truncation in Arabidopsis.

Andrew D Nelson1, Jonathan C Lamb, Pierre S Kobrossly, Dorothy E Shippen.   

Abstract

Conversion of a double-strand break into a telomere is a dangerous, potentially lethal event. However, little is known about the mechanism and control of de novo telomere formation (DNTF). DNTF can be instigated by the insertion of a telomere repeat array (TRA) into the host genome, which seeds the formation of a new telomere, resulting in chromosome truncation. Such events are rare and concentrated at chromosome ends. Here, we introduce tetraploid Arabidopsis thaliana as a robust genetic model for DNTF. Transformation of a 2.6-kb TRA into tetraploid plants resulted in a DNTF efficiency of 56%, fivefold higher than in diploid plants and 50-fold higher than in human cells. DNTF events were recovered across the entire genome, indicating that genetic redundancy facilitates recovery of DNTF events. Although TRAs as short as 100 bp seeded new telomeres, these tracts were unstable unless they were extended above a 1-kb size threshold. Unexpectedly, DNTF efficiency increased in plants lacking telomerase, and DNTF rates were lower in plants null for Ku70 or Lig4, components of the nonhomologous end-joining repair pathway. We conclude that multiple competing pathways modulate DNTF, and that tetraploid Arabidopsis will be a powerful model for elucidating the molecular details of these processes.

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Year:  2011        PMID: 21653196      PMCID: PMC3160034          DOI: 10.1105/tpc.111.086017

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  65 in total

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Authors:  Kathleen Collins
Journal:  Nat Rev Mol Cell Biol       Date:  2006-07       Impact factor: 94.444

Review 2.  The maintenance and masking of chromosome termini.

Authors:  Alison A Bertuch; Vicki Lundblad
Journal:  Curr Opin Cell Biol       Date:  2006-05-08       Impact factor: 8.382

3.  Telomere-mediated chromosomal truncation in maize.

Authors:  Weichang Yu; Jonathan C Lamb; Fangpu Han; James A Birchler
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-03       Impact factor: 11.205

4.  Distinct faces of the Ku heterodimer mediate DNA repair and telomeric functions.

Authors:  Albert Ribes-Zamora; Ivana Mihalek; Olivier Lichtarge; Alison A Bertuch
Journal:  Nat Struct Mol Biol       Date:  2007-03-11       Impact factor: 15.369

5.  A RAP1/TRF2 complex inhibits nonhomologous end-joining at human telomeric DNA ends.

Authors:  Nancy S Bae; Peter Baumann
Journal:  Mol Cell       Date:  2007-05-11       Impact factor: 17.970

6.  DNA breaks are masked by multiple Rap1 binding in yeast: implications for telomere capping and telomerase regulation.

Authors:  Simona Negrini; Virginie Ribaud; Alessandro Bianchi; David Shore
Journal:  Genes Dev       Date:  2007-02-01       Impact factor: 11.361

7.  Agrobacterium-mediated transformation of Arabidopsis thaliana using the floral dip method.

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Journal:  Nat Protoc       Date:  2006-06-29       Impact factor: 13.491

8.  Involvement of KU80 in T-DNA integration in plant cells.

Authors:  Jianxiong Li; Manjusha Vaidya; Charles White; Alexander Vainstein; Vitaly Citovsky; Tzvi Tzfira
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-27       Impact factor: 11.205

Review 9.  Chromosome healing by de novo telomere addition in Saccharomyces cerevisiae.

Authors:  Vincent Pennaneach; Christopher D Putnam; Richard D Kolodner
Journal:  Mol Microbiol       Date:  2006-03       Impact factor: 3.501

Review 10.  Shelterin: the protein complex that shapes and safeguards human telomeres.

Authors:  Titia de Lange
Journal:  Genes Dev       Date:  2005-09-15       Impact factor: 12.890

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  16 in total

1.  Retrotransposon insertion targeting: a mechanism for homogenization of centromere sequences on nonhomologous chromosomes.

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Review 2.  Advanced genetic tools for plant biotechnology.

Authors:  Wusheng Liu; Joshua S Yuan; C Neal Stewart
Journal:  Nat Rev Genet       Date:  2013-10-09       Impact factor: 53.242

3.  De novo telomere formation in Arabidopsis tetraploids.

Authors:  Nancy A Eckardt
Journal:  Plant Cell       Date:  2011-06-10       Impact factor: 11.277

Review 4.  Engineered minichromosomes in plants.

Authors:  James A Birchler
Journal:  Chromosome Res       Date:  2015-02       Impact factor: 5.239

Review 5.  Engineering of plant chromosomes.

Authors:  Michael Florian Mette; Andreas Houben
Journal:  Chromosome Res       Date:  2015-02       Impact factor: 5.239

6.  In vivo modification of a maize engineered minichromosome.

Authors:  Robert T Gaeta; Rick E Masonbrink; Changzeng Zhao; Abhijit Sanyal; Lakshminarasimhan Krishnaswamy; James A Birchler
Journal:  Chromosoma       Date:  2013-03-22       Impact factor: 4.316

Review 7.  Genetic and epigenetic effects on centromere establishment.

Authors:  Yick Hin Ling; Zhongyang Lin; Karen Wing Yee Yuen
Journal:  Chromosoma       Date:  2019-11-28       Impact factor: 4.316

Review 8.  Minichromosomes and artificial chromosomes in Arabidopsis.

Authors:  Minoru Murata
Journal:  Chromosome Res       Date:  2014-06       Impact factor: 5.239

9.  Characterization of a PDK1 homologue from the moss Physcomitrella patens.

Authors:  Anna C Nelson Dittrich; Timothy P Devarenne
Journal:  Plant Physiol       Date:  2011-12-07       Impact factor: 8.340

10.  De novo generation of plant centromeres at tandem repeats.

Authors:  Chee How Teo; Inna Lermontova; Andreas Houben; Michael Florian Mette; Ingo Schubert
Journal:  Chromosoma       Date:  2013-03-23       Impact factor: 4.316

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