Literature DB >> 21643541

Pseudomonas aeruginosa porphobilinogen synthase assembly state regulators: hit discovery and initial SAR studies.

Allen B Reitz1, Ursula D Ramirez, Linda Stith, Yanming Du, Garry R Smith, Eileen K Jaffe.   

Abstract

Porphobilinogen synthase (PBGS) catalyzes the first common step in the biosynthesis of the essential heme, chlorophyll and vitamin B(12) heme pigments. PBGS activity is regulated by assembly state, with certain oligomers exhibiting biological activity and others either partially or completely inactive, affording an innovative means of allosteric drug action. Pseudomonas aeruginosa PBGS is functionally active as an octamer, and inactive as a dimer. We have identified a series of compounds that stabilize the inactive P. aeruginosa dimer by a computational prescreen followed by native PAGE gel mobility shift analysis. From those results, we have prepared related thiadiazoles and evaluated their ability to regulate P. aeruginosa PBGS assembly state.

Entities:  

Year:  2010        PMID: 21643541      PMCID: PMC3106444     

Source DB:  PubMed          Journal:  ARKIVOC        ISSN: 1551-7004            Impact factor:   1.140


  24 in total

1.  Synthesis of 2-amino-5-sulfanyl-1,3,4-thiadiazole derivatives and evaluation of their antidepressant and anxiolytic activity.

Authors:  F Clerici; D Pocar; M Guido; A Loche; V Perlini; M Brufani
Journal:  J Med Chem       Date:  2001-03-15       Impact factor: 7.446

2.  Glide: a new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy.

Authors:  Richard A Friesner; Jay L Banks; Robert B Murphy; Thomas A Halgren; Jasna J Klicic; Daniel T Mainz; Matthew P Repasky; Eric H Knoll; Mee Shelley; Jason K Perry; David E Shaw; Perry Francis; Peter S Shenkin
Journal:  J Med Chem       Date:  2004-03-25       Impact factor: 7.446

3.  Thrombogenic collagen-mimetic peptides: Self-assembly of triple helix-based fibrils driven by hydrophobic interactions.

Authors:  Mabel A Cejas; William A Kinney; Cailin Chen; Jeremy G Vinter; Harold R Almond; Karin M Balss; Cynthia A Maryanoff; Ute Schmidt; Michael Breslav; Andrew Mahan; Eilyn Lacy; Bruce E Maryanoff
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-16       Impact factor: 11.205

Review 4.  Lessons from 60 years of pharmaceutical innovation.

Authors:  Bernard Munos
Journal:  Nat Rev Drug Discov       Date:  2009-12       Impact factor: 84.694

Review 5.  Regulation of erythroid 5-aminolevulinate synthase expression during erythropoiesis.

Authors:  T J Sadlon; T Dell'Oso; K H Surinya; B K May
Journal:  Int J Biochem Cell Biol       Date:  1999-10       Impact factor: 5.085

6.  High resolution crystal structure of a Mg2+-dependent porphobilinogen synthase.

Authors:  N Frankenberg; P T Erskine; J B Cooper; P M Shoolingin-Jordan; D Jahn; D W Heinz
Journal:  J Mol Biol       Date:  1999-06-11       Impact factor: 5.469

7.  Porphobilinogen synthase from pea: expression from an artificial gene, kinetic characterization, and novel implications for subunit interactions.

Authors:  J Kervinen; R L Dunbrack; S Litwin; J Martins; R C Scarrow; M Volin; A T Yeung; E Yoon; E K Jaffe
Journal:  Biochemistry       Date:  2000-08-01       Impact factor: 3.162

8.  An unusual phylogenetic variation in the metal ion binding sites of porphobilinogen synthase.

Authors:  Eileen K Jaffe
Journal:  Chem Biol       Date:  2003-01

9.  Kinetics and thermodynamics of the interchange of the morpheein forms of human porphobilinogen synthase.

Authors:  Trevor Selwood; Lei Tang; Sarah H Lawrence; Yana Anokhina; Eileen K Jaffe
Journal:  Biochemistry       Date:  2008-02-14       Impact factor: 3.162

10.  Characterization of the role of the stimulatory magnesium of Escherichia coli porphobilinogen synthase.

Authors:  E K Jaffe; S Ali; L W Mitchell; K M Taylor; M Volin; G D Markham
Journal:  Biochemistry       Date:  1995-01-10       Impact factor: 3.162

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  6 in total

1.  Impact of quaternary structure dynamics on allosteric drug discovery.

Authors:  Eileen K Jaffe
Journal:  Curr Top Med Chem       Date:  2013       Impact factor: 3.295

Review 2.  Allostery and the dynamic oligomerization of porphobilinogen synthase.

Authors:  Eileen K Jaffe; Sarah H Lawrence
Journal:  Arch Biochem Biophys       Date:  2011-10-19       Impact factor: 4.013

3.  MORPHEEINS - A NEW PATHWAY FOR ALLOSTERIC DRUG DISCOVERY.

Authors:  Eileen K Jaffe
Journal:  Open Conf Proc J       Date:  2010

4.  A new model for allosteric regulation of phenylalanine hydroxylase: implications for disease and therapeutics.

Authors:  Eileen K Jaffe; Linda Stith; Sarah H Lawrence; Mark Andrake; Roland L Dunbrack
Journal:  Arch Biochem Biophys       Date:  2013-01-11       Impact factor: 4.013

Review 5.  Porphobilinogen synthase: An equilibrium of different assemblies in human health.

Authors:  Eileen K Jaffe
Journal:  Prog Mol Biol Transl Sci       Date:  2019-12-06       Impact factor: 3.622

6.  wALADin benzimidazoles differentially modulate the function of porphobilinogen synthase orthologs.

Authors:  Christian S Lentz; Victoria S Halls; Jeffrey S Hannam; Silke Strassel; Sarah H Lawrence; Eileen K Jaffe; Michael Famulok; Achim Hoerauf; Kenneth M Pfarr
Journal:  J Med Chem       Date:  2014-02-25       Impact factor: 7.446

  6 in total

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