Literature DB >> 21643557

MORPHEEINS - A NEW PATHWAY FOR ALLOSTERIC DRUG DISCOVERY.

Eileen K Jaffe1.   

Abstract

The morpheein model of allosteric regulation can be applied as a novel approach to the discovery of small molecule allosteric modulators of protein function. Morpheeins are homo-oligomeric proteins where, under physiological conditions, the oligomer can dissociate, the dissociated units can change conformation, and the altered conformational state can reassociate to a structurally and functionally distinct oligomer. This phenomenon serves as a basis for allostery, as a basis for conformational diseases, as a basis for drug discovery, and may be applicable to personalized medicine such as in the prediction of drug side effects. Each of these relationships has been established for the prototype morpheein, porphobilinogen synthase, where the conformational disease is a porphyria and the drug application is in antimicrobial discovery. These data are presented along with a discussion of other drug targets for which the morpheein model of allostery may apply. Such targets include HIV integrase, TNFα, β-tryptase, and p53.

Entities:  

Year:  2010        PMID: 21643557      PMCID: PMC3107518          DOI: 10.2174/2210289201001010001

Source DB:  PubMed          Journal:  Open Conf Proc J


  37 in total

1.  Crystal structure of the mouse p53 core DNA-binding domain at 2.7 A resolution.

Authors:  K Zhao; X Chai; K Johnston; A Clements; R Marmorstein
Journal:  J Biol Chem       Date:  2001-01-04       Impact factor: 5.157

Review 2.  Regulatory mechanisms in photosynthetic carbon metabolism.

Authors:  D A Walker
Journal:  Curr Top Cell Regul       Date:  1976

3.  Glide: a new approach for rapid, accurate docking and scoring. 2. Enrichment factors in database screening.

Authors:  Thomas A Halgren; Robert B Murphy; Richard A Friesner; Hege S Beard; Leah L Frye; W Thomas Pollard; Jay L Banks
Journal:  J Med Chem       Date:  2004-03-25       Impact factor: 7.446

4.  Glide: a new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy.

Authors:  Richard A Friesner; Jay L Banks; Robert B Murphy; Thomas A Halgren; Jasna J Klicic; Daniel T Mainz; Matthew P Repasky; Eric H Knoll; Mee Shelley; Jason K Perry; David E Shaw; Perry Francis; Peter S Shenkin
Journal:  J Med Chem       Date:  2004-03-25       Impact factor: 7.446

5.  ALAD porphyria is a conformational disease.

Authors:  Eileen K Jaffe; Linda Stith
Journal:  Am J Hum Genet       Date:  2006-12-21       Impact factor: 11.025

6.  Probing the active site of Pseudomonas aeruginosa porphobilinogen synthase using newly developed inhibitors.

Authors:  Frederic Frère; Merle Nentwich; Sabine Gacond; Dirk W Heinz; Reinhard Neier; Nicole Frankenberg-Dinkel
Journal:  Biochemistry       Date:  2006-07-11       Impact factor: 3.162

7.  Plastid-associated porphobilinogen synthase from Toxoplasma gondii: kinetic and structural properties validate therapeutic potential.

Authors:  Dhanasekaran Shanmugam; Bo Wu; Ursula Ramirez; Eileen K Jaffe; David S Roos
Journal:  J Biol Chem       Date:  2010-05-04       Impact factor: 5.157

8.  Highly heterogeneous nature of delta-aminolevulinate dehydratase (ALAD) deficiencies in ALAD porphyria.

Authors:  M Maruno; K Furuyama; R Akagi; Y Horie; K Meguro; L Garbaczewski; N Chiorazzi; M O Doss; A Hassoun; R Mercelis; L Verstraeten; P Harper; Y Floderus; S Thunell; S Sassa
Journal:  Blood       Date:  2001-05-15       Impact factor: 22.113

9.  An unusual phylogenetic variation in the metal ion binding sites of porphobilinogen synthase.

Authors:  Eileen K Jaffe
Journal:  Chem Biol       Date:  2003-01

10.  Kinetics and thermodynamics of the interchange of the morpheein forms of human porphobilinogen synthase.

Authors:  Trevor Selwood; Lei Tang; Sarah H Lawrence; Yana Anokhina; Eileen K Jaffe
Journal:  Biochemistry       Date:  2008-02-14       Impact factor: 3.162

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  10 in total

1.  Identification of Non-nucleoside Human Ribonucleotide Reductase Modulators.

Authors:  Md Faiz Ahmad; Sarah E Huff; John Pink; Intekhab Alam; Andrew Zhang; Kay Perry; Michael E Harris; Tessianna Misko; Suheel K Porwal; Nancy L Oleinick; Masaru Miyagi; Rajesh Viswanathan; Chris Godfrey Dealwis
Journal:  J Med Chem       Date:  2015-12-09       Impact factor: 7.446

2.  Impact of quaternary structure dynamics on allosteric drug discovery.

Authors:  Eileen K Jaffe
Journal:  Curr Top Med Chem       Date:  2013       Impact factor: 3.295

3.  A new model for allosteric regulation of phenylalanine hydroxylase: implications for disease and therapeutics.

Authors:  Eileen K Jaffe; Linda Stith; Sarah H Lawrence; Mark Andrake; Roland L Dunbrack
Journal:  Arch Biochem Biophys       Date:  2013-01-11       Impact factor: 4.013

4.  Environmental contaminants perturb fragile protein assemblies and inhibit normal protein function.

Authors:  Sarah H Lawrence; Trevor Selwood; Eileen K Jaffe
Journal:  Curr Chem Biol       Date:  2013

5.  Diverse clinical compounds alter the quaternary structure and inhibit the activity of an essential enzyme.

Authors:  Sarah H Lawrence; Trevor Selwood; Eileen K Jaffe
Journal:  ChemMedChem       Date:  2011-04-19       Impact factor: 3.466

6.  The Remarkable Character of Porphobilinogen Synthase.

Authors:  Eileen K Jaffe
Journal:  Acc Chem Res       Date:  2016-10-26       Impact factor: 22.384

Review 7.  Porphobilinogen synthase: An equilibrium of different assemblies in human health.

Authors:  Eileen K Jaffe
Journal:  Prog Mol Biol Transl Sci       Date:  2019-12-06       Impact factor: 3.622

Review 8.  Unfolding the Mysteries of Protein Metamorphosis.

Authors:  Acacia F Dishman; Brian F Volkman
Journal:  ACS Chem Biol       Date:  2018-06-07       Impact factor: 5.100

9.  A framework for application of metabolic modeling in yeast to predict the effects of nsSNV in human orthologs.

Authors:  Hayley Dingerdissen; Daniel S Weaver; Peter D Karp; Yang Pan; Vahan Simonyan; Raja Mazumder
Journal:  Biol Direct       Date:  2014-06-03       Impact factor: 4.540

10.  Supramolecular reactions of metallo-architectures: Ag2-double-helicate/Zn4-grid, Pb4-grid/Zn4-grid interconversions, and Ag2-double-helicate fusion.

Authors:  Adrian-Mihail Stadler; Juan Ramírez; Jean-Marie Lehn; Bruno Vincent
Journal:  Chem Sci       Date:  2016-02-29       Impact factor: 9.825

  10 in total

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