Literature DB >> 21633460

Fast perturbation Monte Carlo method for photon migration in heterogeneous turbid media.

Angelo Sassaroli1.   

Abstract

We present a two-step Monte Carlo (MC) method that is used to solve the radiative transfer equation in heterogeneous turbid media. The method exploits the one-to-one correspondence between the seed value of a random number generator and the sequence of random numbers. In the first step, a full MC simulation is run for the initial distribution of the optical properties and the "good" seeds (the ones leading to detected photons) are stored in an array. In the second step, we run a new MC simulation with only the good seeds stored in the first step, i.e., we propagate only detected photons. The effect of a change in the optical properties is calculated in a short time by using two scaling relationships. By this method we can increase the speed of a simulation up to a factor of 1300 in typical situations found in near-IR tissue spectroscopy and diffuse optical tomography, with a minimal requirement for hard disk space. Potential applications of this method for imaging of turbid media and the inverse problem are discussed.
© 2011 Optical Society of America

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Year:  2011        PMID: 21633460      PMCID: PMC3267237          DOI: 10.1364/OL.36.002095

Source DB:  PubMed          Journal:  Opt Lett        ISSN: 0146-9592            Impact factor:   3.776


  14 in total

1.  Condensed Monte Carlo simulations for the description of light transport.

Authors:  R Graaff; M H Koelink; F F de Mul; W G Zijistra; A C Dassel; J G Aarnoudse
Journal:  Appl Opt       Date:  1993-02-01       Impact factor: 1.980

2.  GPU-based Monte Carlo simulation for light propagation in complex heterogeneous tissues.

Authors:  Nunu Ren; Jimin Liang; Xiaochao Qu; Jianfeng Li; Bingjia Lu; Jie Tian
Journal:  Opt Express       Date:  2010-03-29       Impact factor: 3.894

3.  Perturbation Monte Carlo methods to solve inverse photon migration problems in heterogeneous tissues.

Authors:  C K Hayakawa; J Spanier; F Bevilacqua; A K Dunn; J S You; B J Tromberg; V Venugopalan
Journal:  Opt Lett       Date:  2001-09-01       Impact factor: 3.776

4.  Real-time method for fitting time-resolved reflectance and transmittance measurements with a monte carlo model.

Authors:  A Pifferi; P Taroni; G Valentini; S Andersson-Engels
Journal:  Appl Opt       Date:  1998-05-01       Impact factor: 1.980

5.  Three dimensional Monte Carlo code for photon migration through complex heterogeneous media including the adult human head.

Authors:  David Boas; J Culver; J Stott; A Dunn
Journal:  Opt Express       Date:  2002-02-11       Impact factor: 3.894

6.  Shape based Monte Carlo code for light transport in complex heterogeneous Tissues.

Authors:  Eduardo Margallo-Balbás; Patrick J French
Journal:  Opt Express       Date:  2007-10-17       Impact factor: 3.894

7.  Determination of the optical properties of turbid media from a single Monte Carlo simulation.

Authors:  A Kienle; M S Patterson
Journal:  Phys Med Biol       Date:  1996-10       Impact factor: 3.609

8.  MCML--Monte Carlo modeling of light transport in multi-layered tissues.

Authors:  L Wang; S L Jacques; L Zheng
Journal:  Comput Methods Programs Biomed       Date:  1995-07       Impact factor: 5.428

9.  A Monte Carlo model for the absorption and flux distributions of light in tissue.

Authors:  B C Wilson; G Adam
Journal:  Med Phys       Date:  1983 Nov-Dec       Impact factor: 4.071

10.  A tetrahedron-based inhomogeneous Monte Carlo optical simulator.

Authors:  H Shen; G Wang
Journal:  Phys Med Biol       Date:  2010-01-20       Impact factor: 3.609

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  6 in total

1.  Generalized mesh-based Monte Carlo for wide-field illumination and detection via mesh retessellation.

Authors:  Ruoyang Yao; Xavier Intes; Qianqian Fang
Journal:  Biomed Opt Express       Date:  2015-12-18       Impact factor: 3.732

2.  Direct approach to compute Jacobians for diffuse optical tomography using perturbation Monte Carlo-based photon "replay".

Authors:  Ruoyang Yao; Xavier Intes; Qianqian Fang
Journal:  Biomed Opt Express       Date:  2018-09-04       Impact factor: 3.732

3.  Accurate optical parameter extraction procedure for broadband near-infrared spectroscopy of brain matter.

Authors:  Ebraheem Sultan; Laleh Najafizadeh; Amir H Gandjbakhche; Kambiz Pourrezaei; Afshin Daryoush
Journal:  J Biomed Opt       Date:  2013-01       Impact factor: 3.170

4.  Comparison of a layered slab and an atlas head model for Monte Carlo fitting of time-domain near-infrared spectroscopy data of the adult head.

Authors:  Juliette Selb; Tyler M Ogden; Jay Dubb; Qianqian Fang; David A Boas
Journal:  J Biomed Opt       Date:  2014-01       Impact factor: 3.170

5.  Mesoscopic landscape of cortical functions revealed by through-skull wide-field optical imaging in marmoset monkeys.

Authors:  Xindong Song; Yueqi Guo; Hongbo Li; Chenggang Chen; Jong Hoon Lee; Yang Zhang; Zachary Schmidt; Xiaoqin Wang
Journal:  Nat Commun       Date:  2022-04-26       Impact factor: 17.694

6.  Adaptive stochastic Gauss-Newton method with optical Monte Carlo for quantitative photoacoustic tomography.

Authors:  Niko Hänninen; Aki Pulkkinen; Simon Arridge; Tanja Tarvainen
Journal:  J Biomed Opt       Date:  2022-04       Impact factor: 3.758

  6 in total

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