Literature DB >> 21625293

Image Atlas Construction via Intrinsic Averaging on the Manifold of Images.

Yuchen Xie1, Jeffrey Ho, Baba C Vemuri.   

Abstract

In this paper, we propose a novel algorithm for computing an atlas from a collection of images. In the literature, atlases have almost always been computed as some types of means such as the straightforward Euclidean means or the more general Karcher means on Riemannian manifolds. In the context of images, the paper's main contribution is a geometric framework for computing image atlases through a two-step process: the localization of mean and the realization of it as an image. In the localization step, a few nearest neighbors of the mean among the input images are determined, and the realization step then proceeds to reconstruct the atlas image using these neighbors. Decoupling the localization step from the realization step provides the flexibility that allows us to formulate a general algorithm for computing image atlas. More specifically, we assume the input images belong to some smooth manifold M modulo image rotations. We use a graph structure to represent the manifold, and for the localization step, we formulate a convex optimization problem in ℝ(k) (k the number of input images) to determine the crucial neighbors that are used in the realization step to form the atlas image. The algorithm is both unbiased and rotation-invariant. We have evaluated the algorithm using synthetic and real images. In particular, experimental results demonstrate that the atlases computed using the proposed algorithm preserve important image features and generally enjoy better image quality in comparison with atlases computed using existing methods.

Entities:  

Year:  2010        PMID: 21625293      PMCID: PMC3103231          DOI: 10.1109/CVPR.2010.5540035

Source DB:  PubMed          Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit        ISSN: 1063-6919


  7 in total

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5.  Unbiased diffeomorphic atlas construction for computational anatomy.

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7.  Open Access Series of Imaging Studies (OASIS): cross-sectional MRI data in young, middle aged, nondemented, and demented older adults.

Authors:  Daniel S Marcus; Tracy H Wang; Jamie Parker; John G Csernansky; John C Morris; Randy L Buckner
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  7 in total
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1.  Hierarchical unbiased graph shrinkage (HUGS): a novel groupwise registration for large data set.

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2.  Multiple Atlas construction from a heterogeneous brain MR image collection.

Authors:  Yuchen Xie; Jeffrey Ho; Baba C Vemuri
Journal:  IEEE Trans Med Imaging       Date:  2013-01-14       Impact factor: 10.048

3.  ATLAS CONSTRUCTION FROM HIGH ANGULAR RESOLUTION DIFFUSION IMAGING DATA REPRESENTED BY GAUSSIAN MIXTURE FIELDS.

Authors:  Guang Cheng; Baba C Vemuri; Min-Sig Hwang; Dena Howland; John R Forder
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2011-06-09

4.  Constructing Connectome Atlas by Graph Laplacian Learning.

Authors:  Minjeong Kim; Chenggang Yan; Defu Yang; Peipeng Liang; Daniel I Kaufer; Guorong Wu
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5.  A Method for Automated Classification of Parkinson's Disease Diagnosis Using an Ensemble Average Propagator Template Brain Map Estimated from Diffusion MRI.

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  5 in total

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