Literature DB >> 18979726

Extracting tractosemas from a displacement probability field for tractography in DW-MRI.

Angelos Barmpoutis1, Baba C Vemuri, Dena Howland, John R Forder.   

Abstract

In this paper we present a novel method for estimating a field of asymmetric spherical functions, dubbed tractosemas, given the intra-voxel displacement probability information. The peaks of tractosemas correspond to directions of distinct fibers, which can have either symmetric or asymmetric local fiber structure. This is in contrast to the existing methods that estimate fiber orientation distributions which are naturally symmetric and therefore cannot model asymmetries such as splaying fibers. We propose a method for extracting tractosemas from a given field of displacement probability iso-surfaces via a diffusion process. The diffusion is performed by minimizing a kernel convolution integral, which leads to an update formula expressed in the convenient form of a discrete kernel convolution. The kernel expresses the probability of diffusion between two neighboring spherical functions and we model it by the product of Gaussian and von Mises distributions. The model is validated via experiments on synthetic and real diffusion-weighted magnetic resonance (DW-MRI) datasets from a rat hippocampus and spinal cord.

Entities:  

Mesh:

Year:  2008        PMID: 18979726      PMCID: PMC2760009          DOI: 10.1007/978-3-540-85988-8_2

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  18 in total

1.  In vivo fiber tractography using DT-MRI data.

Authors:  P J Basser; S Pajevic; C Pierpaoli; J Duda; A Aldroubi
Journal:  Magn Reson Med       Date:  2000-10       Impact factor: 4.668

2.  Characterization of anisotropy in high angular resolution diffusion-weighted MRI.

Authors:  Lawrence R Frank
Journal:  Magn Reson Med       Date:  2002-06       Impact factor: 4.668

3.  Generalized diffusion tensor imaging and analytical relationships between diffusion tensor imaging and high angular resolution diffusion imaging.

Authors:  Evren Ozarslan; Thomas H Mareci
Journal:  Magn Reson Med       Date:  2003-11       Impact factor: 4.668

4.  DT-MRI denoising and neuronal fiber tracking.

Authors:  T McGraw; B C Vemuri; Y Chen; M Rao; T Mareci
Journal:  Med Image Anal       Date:  2004-06       Impact factor: 8.545

5.  Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution.

Authors:  J-Donald Tournier; Fernando Calamante; David G Gadian; Alan Connelly
Journal:  Neuroimage       Date:  2004-11       Impact factor: 6.556

6.  Measurement of fiber orientation distributions using high angular resolution diffusion imaging.

Authors:  Adam W Anderson
Journal:  Magn Reson Med       Date:  2005-11       Impact factor: 4.668

7.  A Bayesian approach for stochastic white matter tractography.

Authors:  Ola Friman; Gunnar Farnebäck; Carl-Fredrik Westin
Journal:  IEEE Trans Med Imaging       Date:  2006-08       Impact factor: 10.048

8.  A unified computational framework for deconvolution to reconstruct multiple fibers from diffusion weighted MRI.

Authors:  Bing Jian; Baba C Vemuri
Journal:  IEEE Trans Med Imaging       Date:  2007-11       Impact factor: 10.048

9.  Finsler active contours.

Authors:  John Melonakos; Eric Pichon; Sigurd Angenent; Allen Tannenbaum
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2008-03       Impact factor: 6.226

10.  FAST DISPLACEMENT PROBABILITY PROFILE APPROXIMATION FROM HARDI USING 4TH-ORDER TENSORS.

Authors:  Angelos Barmpoutis; Baba C Vemuri; John R Forder
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2008-05-14
View more
  8 in total

1.  Image Atlas Construction via Intrinsic Averaging on the Manifold of Images.

Authors:  Yuchen Xie; Jeffrey Ho; Baba C Vemuri
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2010-06

2.  Tractography from HARDI using an intrinsic unscented Kalman filter.

Authors:  Guang Cheng; Hesamoddin Salehian; John R Forder; Baba C Vemuri
Journal:  IEEE Trans Med Imaging       Date:  2014-09-05       Impact factor: 10.048

3.  Mitigating gyral bias in cortical tractography via asymmetric fiber orientation distributions.

Authors:  Ye Wu; Yoonmi Hong; Yuanjing Feng; Dinggang Shen; Pew-Thian Yap
Journal:  Med Image Anal       Date:  2019-09-13       Impact factor: 8.545

4.  Improving Fiber Alignment in HARDI by Combining Contextual PDE Flow with Constrained Spherical Deconvolution.

Authors:  J M Portegies; R H J Fick; G R Sanguinetti; S P L Meesters; G Girard; R Duits
Journal:  PLoS One       Date:  2015-10-14       Impact factor: 3.240

Review 5.  Building connectomes using diffusion MRI: why, how and but.

Authors:  Stamatios N Sotiropoulos; Andrew Zalesky
Journal:  NMR Biomed       Date:  2017-06-27       Impact factor: 4.044

6.  Improved tractography using asymmetric fibre orientation distributions.

Authors:  Matteo Bastiani; Michiel Cottaar; Krikor Dikranian; Aurobrata Ghosh; Hui Zhang; Daniel C Alexander; Timothy E Behrens; Saad Jbabdi; Stamatios N Sotiropoulos
Journal:  Neuroimage       Date:  2017-06-29       Impact factor: 6.556

7.  Optimal short-time acquisition schemes in high angular resolution diffusion-weighted imaging.

Authors:  V Prčkovska; H C Achterberg; M Bastiani; P Pullens; E Balmashnova; B M Ter Haar Romeny; A Vilanova; A Roebroeck
Journal:  Int J Biomed Imaging       Date:  2013-03-11

8.  Evaluating contextual processing in diffusion MRI: application to optic radiation reconstruction for epilepsy surgery.

Authors:  Chantal M W Tax; Remco Duits; Anna Vilanova; Bart M ter Haar Romeny; Paul Hofman; Louis Wagner; Alexander Leemans; Pauly Ossenblok
Journal:  PLoS One       Date:  2014-07-31       Impact factor: 3.240

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.