Literature DB >> 21625288

High-throughput single-molecule fluorescence spectroscopy using parallel detection.

X Michalet1, R A Colyer, G Scalia, T Kim, Moran Levi, Daniel Aharoni, Adrian Cheng, F Guerrieri, Katsushi Arisaka, Jacques Millaud, I Rech, D Resnati, S Marangoni, A Gulinatti, M Ghioni, S Tisa, F Zappa, S Cova, S Weiss.   

Abstract

Solution-based single-molecule fluorescence spectroscopy is a powerful new experimental approach with applications in all fields of natural sciences. The basic concept of this technique is to excite and collect light from a very small volume (typically femtoliter) and work in a concentration regime resulting in rare burst-like events corresponding to the transit of a single-molecule. Those events are accumulated over time to achieve proper statistical accuracy. Therefore the advantage of extreme sensitivity is somewhat counterbalanced by a very long acquisition time. One way to speed up data acquisition is parallelization. Here we will discuss a general approach to address this issue, using a multispot excitation and detection geometry that can accommodate different types of novel highly-parallel detector arrays. We will illustrate the potential of this approach with fluorescence correlation spectroscopy (FCS) and single-molecule fluorescence measurements obtained with different novel multipixel single-photon counting detectors.

Entities:  

Year:  2010        PMID: 21625288      PMCID: PMC3103226          DOI: 10.1117/12.846784

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  13 in total

1.  Fluorescence-intensity distribution analysis and its application in biomolecular detection technology.

Authors:  P Kask; K Palo; D Ullmann; K Gall
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

2.  Fluorescence intensity multiple distributions analysis: concurrent determination of diffusion times and molecular brightness.

Authors:  K Palo; U Mets; S Jäger; P Kask; K Gall
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

3.  Statistical analysis of fluorescence correlation spectroscopy: the standard deviation and bias.

Authors:  Saveez Saffarian; Elliot L Elson
Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

4.  Zero-mode waveguides for single-molecule analysis at high concentrations.

Authors:  M J Levene; J Korlach; S W Turner; M Foquet; H G Craighead; W W Webb
Journal:  Science       Date:  2003-01-31       Impact factor: 47.728

5.  Parallel single molecule detection with a fully integrated single-photon 2x2 CMOS detector array.

Authors:  Michael Gösch; Alexandre Serov; Tiemo Anhut; Theo Lasser; Alexis Rochas; Pierre-André Besse; Radivoje S Popovic; Hans Blom; Rudolf Rigler
Journal:  J Biomed Opt       Date:  2004 Sep-Oct       Impact factor: 3.170

6.  Accurate FRET measurements within single diffusing biomolecules using alternating-laser excitation.

Authors:  Nam Ki Lee; Achillefs N Kapanidis; You Wang; Xavier Michalet; Jayanta Mukhopadhyay; Richard H Ebright; Shimon Weiss
Journal:  Biophys J       Date:  2005-01-14       Impact factor: 4.033

7.  Shot-noise limited single-molecule FRET histograms: comparison between theory and experiments.

Authors:  Eyal Nir; Xavier Michalet; Kambiz M Hamadani; Ted A Laurence; Daniel Neuhauser; Yevgeniy Kovchegov; Shimon Weiss
Journal:  J Phys Chem B       Date:  2006-11-09       Impact factor: 2.991

8.  Fast, flexible algorithm for calculating photon correlations.

Authors:  Ted A Laurence; Samantha Fore; Thomas Huser
Journal:  Opt Lett       Date:  2006-03-15       Impact factor: 3.776

9.  A distributed algorithm for multi-tau autocorrelation.

Authors:  Michael J Culbertson; Daniel L Burden
Journal:  Rev Sci Instrum       Date:  2007-04       Impact factor: 1.523

10.  Hybrid photodetector for single-molecule spectroscopy and microscopy.

Authors:  X Michalet; Adrian Cheng; Joshua Antelman; Motohiro Suyama; Katsushi Arisaka; Shimon Weiss
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2008-02-15
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  8 in total

Review 1.  Development of new photon-counting detectors for single-molecule fluorescence microscopy.

Authors:  X Michalet; R A Colyer; G Scalia; A Ingargiola; R Lin; J E Millaud; S Weiss; Oswald H W Siegmund; Anton S Tremsin; John V Vallerga; A Cheng; M Levi; D Aharoni; K Arisaka; F Villa; F Guerrieri; F Panzeri; I Rech; A Gulinatti; F Zappa; M Ghioni; S Cova
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-12-24       Impact factor: 6.237

2.  New photon-counting detectors for single-molecule fluorescence spectroscopy and imaging.

Authors:  X Michalet; R A Colyer; G Scalia; S Weiss; Oswald H W Siegmund; Anton S Tremsin; John V Vallerga; F Villa; F Guerrieri; I Rech; A Gulinatti; S Tisa; F Zappa; M Ghioni; S Cova
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-05-13

3.  Ultra high-throughput single molecule spectroscopy with a 1024 pixel SPAD.

Authors:  Ryan A Colyer; Giuseppe Scalia; Federica A Villa; Fabrizio Guerrieri; Simone Tisa; Franco Zappa; Sergio Cova; Shimon Weiss; Xavier Michalet
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-02-28

4.  Analysis of Individual Signaling Complexes by mMAPS, a Flow-Proteometric System.

Authors:  Chao-Kai Chou; Pei-Hsiang Tsou; Jennifer L Hsu; Heng-Huan Lee; Ying-Nai Wang; Jun Kameoka; Mien-Chie Hung
Journal:  Curr Protoc Mol Biol       Date:  2016-04-01

5.  mMAPS: a flow-proteometric technique to analyze protein-protein interactions in individual signaling complexes.

Authors:  Chao-Kai Chou; Heng-Huan Lee; Pei-Hsiang Tsou; Chun-Te Chen; Jung-Mao Hsu; Hirohito Yamaguchi; Ying-Nai Wang; Hong-Jen Lee; Jennifer L Hsu; Jin-Fong Lee; Jun Kameoka; Mien-Chie Hung
Journal:  Sci Signal       Date:  2014-03-04       Impact factor: 8.192

6.  Silicon photon-counting avalanche diodes for single-molecule fluorescence spectroscopy.

Authors:  Xavier Michalet; Antonino Ingargiola; Ryan A Colyer; Giuseppe Scalia; Shimon Weiss; Piera Maccagnani; Angelo Gulinatti; Ivan Rech; Massimo Ghioni
Journal:  IEEE J Sel Top Quantum Electron       Date:  2014-11       Impact factor: 4.544

7.  Single-molecule FRET experiments with a red-enhanced custom technology SPAD.

Authors:  Francesco Panzeri; Antonino Ingargiola; Ron R Lin; Niusha Sarkhosh; Angelo Gulinatti; Ivan Rech; Massimo Ghioni; Sergio Cova; Shimon Weiss; Xavier Michalet
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-02-02

Review 8.  Single-photon avalanche diode imagers in biophotonics: review and outlook.

Authors:  Claudio Bruschini; Harald Homulle; Ivan Michel Antolovic; Samuel Burri; Edoardo Charbon
Journal:  Light Sci Appl       Date:  2019-09-18       Impact factor: 17.782

  8 in total

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