Literature DB >> 17477680

A distributed algorithm for multi-tau autocorrelation.

Michael J Culbertson1, Daniel L Burden.   

Abstract

Network data-transfer times in distributed simulation environments can be reduced by performing data analysis at the remote source, if the analytical technique does not require the entire set of data at once. This novel multi-tau autocorrelation algorithm allows time-domain data records to be processed in discrete, distributed segments and combined at a later point in time. The new approach agrees with autocorrelation results performed by concatenating the discrete segments before correlation, but it operates with significantly shortened processing times. The multi-tau algorithm also benefits from reduced memory requirements since it does not require access to the entire data record at once, and from improved scalability since the multi-tau algorithm has order O(N), while fast Fourier transform autocorrelation algorithms have order O(N log N). This distributed algorithm has particular utility in simulations of fluorescence correlation spectroscopy or photon correlation spectroscopy.

Mesh:

Year:  2007        PMID: 17477680     DOI: 10.1063/1.2721116

Source DB:  PubMed          Journal:  Rev Sci Instrum        ISSN: 0034-6748            Impact factor:   1.523


  5 in total

1.  High-throughput single-molecule fluorescence spectroscopy using parallel detection.

Authors:  X Michalet; R A Colyer; G Scalia; T Kim; Moran Levi; Daniel Aharoni; Adrian Cheng; F Guerrieri; Katsushi Arisaka; Jacques Millaud; I Rech; D Resnati; S Marangoni; A Gulinatti; M Ghioni; S Tisa; F Zappa; S Cova; S Weiss
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2010-01-24

2.  Viscosity-dependent diffusion of fluorescent particles using fluorescence correlation spectroscopy.

Authors:  Chanbae Jung; Jaeran Lee; Manil Kang; Sok Won Kim
Journal:  J Fluoresc       Date:  2014-09-23       Impact factor: 2.217

3.  High-throughput multispot single-molecule spectroscopy.

Authors:  Ryan A Colyer; Giuseppe Scalia; Taiho Kim; Ivan Rech; Daniele Resnati; Stefano Marangoni; Massimo Ghioni; Sergio Cova; Shimon Weiss; Xavier Michalet
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2010-01-23

4.  Ultra high-throughput single molecule spectroscopy with a 1024 pixel SPAD.

Authors:  Ryan A Colyer; Giuseppe Scalia; Federica A Villa; Fabrizio Guerrieri; Simone Tisa; Franco Zappa; Sergio Cova; Shimon Weiss; Xavier Michalet
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-02-28

5.  High-throughput FCS using an LCOS spatial light modulator and an 8 × 1 SPAD array.

Authors:  Ryan A Colyer; Giuseppe Scalia; Ivan Rech; Angelo Gulinatti; Massimo Ghioni; Sergio Cova; Shimon Weiss; Xavier Michalet
Journal:  Biomed Opt Express       Date:  2010-11-15       Impact factor: 3.732

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.