Literature DB >> 21619429

Pharmacogenomic biomarkers: validation needed for both the molecular genetic mechanism and clinical effect.

Wolfgang Sadee1.   

Abstract

Drug therapy can be ineffective or cause adverse reactions in a subset of patients. Pharmacogenomic biomarkers afford the opportunity to optimize an individual's therapy. Yet, few tests are currently part of standard care. To validate biomarkers, clinical replication studies are essential. Equally important, but less appreciated, the genetic mechanisms must also be understood to facilitate translation into clinical use. Representing main contributors to genetic variability, regulatory polymorphisms in particular are still poorly studied (e.g., 5-HTTLPR). This article focuses on molecular and functional diversity of genetic biomarkers, as a guide to optimal use in personalized medicine.

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Year:  2011        PMID: 21619429      PMCID: PMC3141324          DOI: 10.2217/pgs.11.23

Source DB:  PubMed          Journal:  Pharmacogenomics        ISSN: 1462-2416            Impact factor:   2.533


  21 in total

1.  Allelic expression imbalance of human mu opioid receptor (OPRM1) caused by variant A118G.

Authors:  Ying Zhang; Danxin Wang; Andrew D Johnson; Audrey C Papp; Wolfgang Sadée
Journal:  J Biol Chem       Date:  2005-07-26       Impact factor: 5.157

Review 2.  Pharmacogenomics of the RNA world: structural RNA polymorphisms in drug therapy.

Authors:  W Sadee; D Wang; A C Papp; J K Pinsonneault; R M Smith; R A Moyer; A D Johnson
Journal:  Clin Pharmacol Ther       Date:  2011-02-02       Impact factor: 6.875

3.  Potential etiologic and functional implications of genome-wide association loci for human diseases and traits.

Authors:  Lucia A Hindorff; Praveen Sethupathy; Heather A Junkins; Erin M Ramos; Jayashri P Mehta; Francis S Collins; Teri A Manolio
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-27       Impact factor: 11.205

4.  Polymorphisms affecting gene transcription and mRNA processing in pharmacogenetic candidate genes: detection through allelic expression imbalance in human target tissues.

Authors:  Andrew D Johnson; Ying Zhang; Audrey C Papp; Julia K Pinsonneault; Jeong-Eun Lim; David Saffen; Zunyan Dai; Danxin Wang; Wolfgang Sadée
Journal:  Pharmacogenet Genomics       Date:  2008-09       Impact factor: 2.089

5.  Intronic polymorphisms affecting alternative splicing of human dopamine D2 receptor are associated with cocaine abuse.

Authors:  Robert A Moyer; Danxin Wang; Audrey C Papp; Ryan M Smith; Linda Duque; Deborah C Mash; Wolfgang Sadee
Journal:  Neuropsychopharmacology       Date:  2010-12-08       Impact factor: 7.853

6.  Highly variable mRNA expression and splicing of L-type voltage-dependent calcium channel alpha subunit 1C in human heart tissues.

Authors:  Danxin Wang; Audrey C Papp; Philip F Binkley; Julie A Johnson; Wolfgang Sadée
Journal:  Pharmacogenet Genomics       Date:  2006-10       Impact factor: 2.089

7.  Influence of life stress on depression: moderation by a polymorphism in the 5-HTT gene.

Authors:  Avshalom Caspi; Karen Sugden; Terrie E Moffitt; Alan Taylor; Ian W Craig; HonaLee Harrington; Joseph McClay; Jonathan Mill; Judy Martin; Antony Braithwaite; Richie Poulton
Journal:  Science       Date:  2003-07-18       Impact factor: 47.728

8.  Measuring cis-acting regulatory variants genome-wide: new insights into expression genetics and disease susceptibility.

Authors:  Wolfgang Sadee
Journal:  Genome Med       Date:  2009-12-22       Impact factor: 11.117

9.  Regulatory polymorphism in vitamin K epoxide reductase complex subunit 1 (VKORC1) affects gene expression and warfarin dose requirement.

Authors:  Danxin Wang; Huizi Chen; Kathryn M Momary; Larisa H Cavallari; Julie A Johnson; Wolfgang Sadée
Journal:  Blood       Date:  2008-06-03       Impact factor: 22.113

10.  Genome-wide analysis of allelic expression imbalance in human primary cells by high-throughput transcriptome resequencing.

Authors:  Graham A Heap; Jennie H M Yang; Kate Downes; Barry C Healy; Karen A Hunt; Nicholas Bockett; Lude Franke; Patrick C Dubois; Charles A Mein; Richard J Dobson; Thomas J Albert; Matthew J Rodesch; David G Clayton; John A Todd; David A van Heel; Vincent Plagnol
Journal:  Hum Mol Genet       Date:  2010-01-01       Impact factor: 6.150

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  5 in total

Review 1.  Genomic architecture of pharmacological efficacy and adverse events.

Authors:  Aparna Chhibber; Deanna L Kroetz; Kelan G Tantisira; Michael McGeachie; Cheng Cheng; Robert Plenge; Eli Stahl; Wolfgang Sadee; Marylyn D Ritchie; Sarah A Pendergrass
Journal:  Pharmacogenomics       Date:  2014-12       Impact factor: 2.533

2.  Architecture of pharmacogenomic associations: structures with functional foundations or castles made of sand?

Authors:  Dylan M Glubb; Federico Innocenti
Journal:  Pharmacogenomics       Date:  2013-01       Impact factor: 2.533

3.  A Knowledge-based System for Intelligent Support in Pharmacogenomics Evidence Assessment: Ontology-driven Evidence Representation and Retrieval.

Authors:  Chia-Ju Lee; Beth Devine; Peter Tarczy-Hornoch
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2017-07-26

Review 4.  Genetics and Extracellular Vesicles of Pediatrics Sleep Disordered Breathing and Epilepsy.

Authors:  Abdelnaby Khalyfa; David Sanz-Rubio
Journal:  Int J Mol Sci       Date:  2019-11-04       Impact factor: 5.923

5.  Pharmacogenomic biomarker information differences between drug labels in the United States and Hungary: implementation from medical practitioner view.

Authors:  Reka Varnai; Istvan Szabo; Greta Tarlos; Laszlo Jozsef Szentpeteri; Attila Sik; Sandor Balogh; Csilla Sipeky
Journal:  Pharmacogenomics J       Date:  2019-12-02       Impact factor: 3.550

  5 in total

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