Literature DB >> 21602338

Genome sequence of Sphingomonas sp. S17, isolated from an alkaline, hyperarsenic, and hypersaline volcano-associated lake at high altitude in the Argentinean Puna.

Maria Eugenia Farias1, Santiago Revale, Estefania Mancini, Omar Ordoñez, Adrian Turjanski, Néstor Cortez, Martin P Vazquez.   

Abstract

The high-altitude Andean lakes (HAAL) in the Argentinean Puna-high Andes region represent an almost unexplored ecosystem exposed to extreme conditions (high UV irradiation, hypersalinity, drastic temperature changes, desiccation, and high pH). Here we present the first genome sequence, a Sphingomonas sp., isolated from this extreme environment.

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Year:  2011        PMID： 21602338      PMCID： PMC3133308          DOI： 10.1128/JB.05225-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  12 in total

Review 1.  Regulation of bacterial conjugation: balancing opportunity with adversity.

Authors:  Laura S Frost; Günther Koraimann
Journal:  Future Microbiol       Date:  2010-07       Impact factor: 3.165

2.  Purification and partial characterization of marinocine, a new broad-spectrum antibacterial protein produced by Marinomonas mediterranea.

Authors:  Patricia Lucas-Elio; Pilar Hernandez; Antonio Sanchez-Amat; Francisco Solano
Journal:  Biochim Biophys Acta       Date:  2004-11-26

3.  Occurrence of resistance to antibiotics, UV-B, and arsenic in bacteria isolated from extreme environments in high-altitude (above 4400 m) Andean wetlands.

Authors:  Julián Dib; Jessica Motok; Verónica Fernández Zenoff; Omar Ordoñez; María Eugenia Farías
Journal:  Curr Microbiol       Date:  2008-03-11       Impact factor: 2.188

4.  Extremophile culture collection from Andean lakes: extreme pristine environments that host a wide diversity of microorganisms with tolerance to UV radiation.

Authors:  Omar F Ordoñez; María R Flores; Julian R Dib; Agustin Paz; María E Farías
Journal:  Microb Ecol       Date:  2009-06-04       Impact factor: 4.552

5.  Isolation of bacteria from remote high altitude Andean lakes able to grow in the presence of antibiotics.

Authors:  Julián R Dib; Annika Weiss; Anna Neumann; Omar Ordoñez; María C Estévez; Maria E Farías
Journal:  Recent Pat Antiinfect Drug Discov       Date:  2009-01

6.  An Ergatis-based prokaryotic genome annotation web server.

Authors:  Chris Hemmerich; Aaron Buechlein; Ram Podicheti; Kashi V Revanna; Qunfeng Dong
Journal:  Bioinformatics       Date:  2010-03-01       Impact factor: 6.937

7.  Isolation of UV-B resistant bacteria from two high altitude Andean lakes (4,400 m) with saline and non saline conditions.

Authors:  María R Flores; Omar F Ordoñez; Marcos J Maldonado; María E Farías
Journal:  J Gen Appl Microbiol       Date:  2009-12       Impact factor: 1.452

8.  Genome sequence of the dioxin-mineralizing bacterium Sphingomonas wittichii RW1.

Authors:  Todd R Miller; Arthur L Delcher; Steven L Salzberg; Elizabeth Saunders; John C Detter; Rolf U Halden
Journal:  J Bacteriol       Date:  2010-09-10       Impact factor: 3.490

9.  Diverse responses to UV-B radiation and repair mechanisms of bacteria isolated from high-altitude aquatic environments.

Authors:  V Fernández Zenoff; F Siñeriz; M E Farías
Journal:  Appl Environ Microbiol       Date:  2006-10-20       Impact factor: 4.792

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
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  18 in total

1.  Forward genetic in planta screen for identification of plant-protective traits of Sphingomonas sp. strain Fr1 against Pseudomonas syringae DC3000.

Authors:  Christine Vogel; Gerd Innerebner; Judith Zingg; Jan Guder; Julia A Vorholt
Journal:  Appl Environ Microbiol       Date:  2012-06-01       Impact factor: 4.792

2.  A meta-analysis of the publicly available bacterial and archaeal sequence diversity in saline soils.

Authors:  Bin Ma; Jun Gong
Journal:  World J Microbiol Biotechnol       Date:  2013-06-12       Impact factor: 3.312

3.  Characterization of Sphingomonas sp. JB13 exo-inulinase: a novel detergent-, salt-, and protease-tolerant exo-inulinase.

Authors:  Junpei Zhou; Mozhen Peng; Rui Zhang; Junjun Li; Xianghua Tang; Bo Xu; Junmei Ding; Yajie Gao; Junrong Ren; Zunxi Huang
Journal:  Extremophiles       Date:  2015-01-10       Impact factor: 2.395

4.  Unexplored Brazilian oceanic island host high salt tolerant biosurfactant-producing bacterial strains.

Authors:  Fábio Sérgio Paulino da Silva; Victor Satler Pylro; Pericles Leonardo Fernandes; Gisele Souza Barcelos; Karlos Henrique Martins Kalks; Carlos Ernesto Gonçalves Reynaud Schaefer; Marcos Rogério Tótola
Journal:  Extremophiles       Date:  2015-02-21       Impact factor: 2.395

5.  Haloarchaea from the Andean Puna: Biological Role in the Energy Metabolism of Arsenic.

Authors:  Omar Federico Ordoñez; María Cecilia Rasuk; Mariana Noelia Soria; Manuel Contreras; María Eugenia Farías
Journal:  Microb Ecol       Date:  2018-03-08       Impact factor: 4.552

6.  Proteomic approach of adaptive response to arsenic stress in Exiguobacterium sp. S17, an extremophile strain isolated from a high-altitude Andean Lake stromatolite.

Authors:  Carolina Belfiore; Omar F Ordoñez; María Eugenia Farías
Journal:  Extremophiles       Date:  2013-03-24       Impact factor: 2.395

7.  New features of desiccation tolerance in the lichen photobiont Trebouxia gelatinosa are revealed by a transcriptomic approach.

Authors:  Fabio Candotto Carniel; Marco Gerdol; Alice Montagner; Elisa Banchi; Gianluca De Moro; Chiara Manfrin; Lucia Muggia; Alberto Pallavicini; Mauro Tretiach
Journal:  Plant Mol Biol       Date:  2016-03-18       Impact factor: 4.076

8.  Comparison of 26 sphingomonad genomes reveals diverse environmental adaptations and biodegradative capabilities.

Authors:  Frank O Aylward; Bradon R McDonald; Sandra M Adams; Alejandra Valenzuela; Rebeccah A Schmidt; Lynne A Goodwin; Tanja Woyke; Cameron R Currie; Garret Suen; Michael Poulsen
Journal:  Appl Environ Microbiol       Date:  2013-04-05       Impact factor: 4.792

9.  Draft genome sequence of Sphingomonas paucimobilis strain LCT-SP1 isolated from the Shenzhou X spacecraft of China.

Authors:  Lei Pan; Hong Zhou; Jia Li; Bing Huang; Jun Guo; Xue-Lin Zhang; Long-Cheng Gao; Chou Xu; Chang-Ting Liu
Journal:  Stand Genomic Sci       Date:  2016-02-24

10.  Genome Sequence of Sphingomonas xenophaga QYY, an Anthraquinone-Degrading Strain.

Authors:  Yuanyuan Qu; Xuwang Zhang; Hao Yu; Hongzhi Tang; E Shen; Hao Zhou; Qiao Ma; Xiangyu Cao; Jiti Zhou; Ping Xu
Journal:  Genome Announc       Date:  2013-01-15
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