Literature DB >> 21601102

Modification of the genome of Rhodobacter sphaeroides and construction of synthetic operons.

Paul R Jaschke1, Rafael G Saer, Stephan Noll, J Thomas Beatty.   

Abstract

The α-proteobacterium Rhodobacter sphaeroides is an exemplary model organism for the creation and study of novel protein expression systems, especially membrane protein complexes that harvest light energy to yield electrical energy. Advantages of this organism include a sequenced genome, tools for genetic engineering, a well-characterized metabolism, and a large membrane surface area when grown under hypoxic or anoxic conditions. This chapter provides a framework for the utilization of R. sphaeroides as a model organism for membrane protein expression, highlighting key advantages and shortcomings. Procedures covered in this chapter include the creation of chromosomal gene deletions, disruptions, and replacements, as well as the construction of a synthetic operon using a model promoter to induce expression of modified photosynthetic reaction center proteins for structural and functional analysis.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21601102     DOI: 10.1016/B978-0-12-385075-1.00023-8

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  10 in total

1.  X-ray transparent microfluidic chips for high-throughput screening and optimization of in meso membrane protein crystallization.

Authors:  Jeremy M Schieferstein; Ashtamurthy S Pawate; Chang Sun; Frank Wan; Paige N Sheraden; Jana Broecker; Oliver P Ernst; Robert B Gennis; Paul J A Kenis
Journal:  Biomicrofluidics       Date:  2017-04-24       Impact factor: 2.800

Review 2.  Harnessing the power of microbial autotrophy.

Authors:  Nico J Claassens; Diana Z Sousa; Vitor A P Martins Dos Santos; Willem M de Vos; John van der Oost
Journal:  Nat Rev Microbiol       Date:  2016-09-26       Impact factor: 60.633

3.  In vivo assembly of a truncated H subunit mutant of the Rhodobacter sphaeroides photosynthetic reaction centre and direct electron transfer from the QA quinone to an electrode.

Authors:  D Jun; H S Dhupar; A Mahmoudzadeh; F Duong; J D W Madden; J T Beatty
Journal:  Photosynth Res       Date:  2018-03-09       Impact factor: 3.573

4.  Top-Down Mass Spectrometry Analysis of Membrane-Bound Light-Harvesting Complex 2 from Rhodobacter sphaeroides.

Authors:  Yue Lu; Hao Zhang; Weidong Cui; Rafael Saer; Haijun Liu; Michael L Gross; Robert E Blankenship
Journal:  Biochemistry       Date:  2015-12-02       Impact factor: 3.162

5.  Use of new strains of Rhodobacter sphaeroides and a modified simple culture medium to increase yield and facilitate purification of the reaction centre.

Authors:  D Jun; R G Saer; J D Madden; J T Beatty
Journal:  Photosynth Res       Date:  2013-06-14       Impact factor: 3.573

6.  Efficient Cas9-based genome editing of Rhodobacter sphaeroides for metabolic engineering.

Authors:  Ioannis Mougiakos; Enrico Orsi; Mohammad Rifqi Ghiffary; Wilbert Post; Alberto de Maria; Belén Adiego-Perez; Servé W M Kengen; Ruud A Weusthuis; John van der Oost
Journal:  Microb Cell Fact       Date:  2019-11-25       Impact factor: 5.328

Review 7.  The transition of Rhodobacter sphaeroides into a microbial cell factory.

Authors:  Enrico Orsi; Jules Beekwilder; Gerrit Eggink; Servé W M Kengen; Ruud A Weusthuis
Journal:  Biotechnol Bioeng       Date:  2020-10-23       Impact factor: 4.530

8.  CRISPR/Cas12a-mediated genome engineering in the photosynthetic bacterium Rhodobacter capsulatus.

Authors:  Yang Zhang; Jifeng Yuan
Journal:  Microb Biotechnol       Date:  2021-03-27       Impact factor: 5.813

9.  Global insights into energetic and metabolic networks in Rhodobacter sphaeroides.

Authors:  Saheed Imam; Daniel R Noguera; Timothy J Donohue
Journal:  BMC Syst Biol       Date:  2013-09-13

10.  Integrated In Silico Analysis of Pathway Designs for Synthetic Photo-Electro-Autotrophy.

Authors:  Michael Volpers; Nico J Claassens; Elad Noor; John van der Oost; Willem M de Vos; Servé W M Kengen; Vitor A P Martins Dos Santos
Journal:  PLoS One       Date:  2016-06-23       Impact factor: 3.240

  10 in total

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