| Literature DB >> 21589434 |
Abstract
In the title compound, C(13)H(9)Br(2)N(3)O, the mol-ecular skeleton, influenced by an intra-molecular O-H⋯N hydrogen bond, is roughly planar, with a mean deviation of 0.033 Å. In the crystal, inter-molecular N-H⋯O hydrogen bonds link the mol-ecules into chains propagating in [100]. Weak inter-molecular π-π inter-actions [centroid-centroid distances = 3.760 (3) and 3.723 (3) Å] further consolidate the packing.Entities:
Year: 2010 PMID: 21589434 PMCID: PMC3011805 DOI: 10.1107/S1600536810045277
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H9Br2N3O | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 1452 reflections |
| θ = 2.9–24.6° | |
| µ = 6.38 mm−1 | |
| Block, orange–yellow | |
| 0.31 × 0.28 × 0.24 mm |
| Bruker APEXII CCD area-detector diffractometer | 2234 independent reflections |
| Radiation source: fine-focus sealed tube | 1706 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.0°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 11656 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2234 reflections | (Δ/σ)max = 0.001 |
| 173 parameters | Δρmax = 0.63 e Å−3 |
| 0 restraints | Δρmin = −0.88 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Br1 | 0.27968 (6) | 1.22305 (9) | 0.48970 (3) | 0.0618 (3) | |
| Br2 | 0.51701 (6) | 1.19032 (9) | 0.54180 (3) | 0.0669 (3) | |
| O1 | 0.0310 (3) | 0.7707 (6) | 0.73898 (19) | 0.0541 (12) | |
| H1 | 0.0614 | 0.8111 | 0.7113 | 0.081* | |
| N1 | 0.3413 (3) | 0.8522 (5) | 0.7102 (2) | 0.0380 (10) | |
| H1A | 0.4011 | 0.8215 | 0.7306 | 0.046* | |
| N2 | 0.1806 (3) | 0.8887 (5) | 0.68102 (19) | 0.0365 (10) | |
| N3 | 0.4280 (4) | 1.0090 (7) | 0.6313 (2) | 0.0615 (15) | |
| C1 | 0.3468 (4) | 0.9445 (6) | 0.6601 (2) | 0.0348 (12) | |
| C2 | 0.2452 (4) | 0.9659 (6) | 0.6416 (2) | 0.0350 (12) | |
| C3 | 0.2226 (4) | 1.0517 (7) | 0.5909 (2) | 0.0432 (13) | |
| C4 | 0.3060 (4) | 1.1146 (7) | 0.5612 (2) | 0.0414 (13) | |
| C5 | 0.4049 (4) | 1.0950 (6) | 0.5811 (2) | 0.0400 (13) | |
| C6 | 0.1127 (5) | 1.0806 (9) | 0.5643 (3) | 0.0680 (19) | |
| H6A | 0.0923 | 1.1873 | 0.5717 | 0.102* | |
| H6B | 0.0653 | 1.0098 | 0.5825 | 0.102* | |
| H6C | 0.1140 | 1.0621 | 0.5226 | 0.102* | |
| C7 | 0.2410 (4) | 0.8221 (6) | 0.7213 (2) | 0.0357 (12) | |
| C8 | 0.2041 (4) | 0.7275 (6) | 0.7696 (2) | 0.0354 (12) | |
| C9 | 0.0988 (5) | 0.7064 (7) | 0.7768 (3) | 0.0431 (13) | |
| C10 | 0.0636 (5) | 0.6169 (8) | 0.8237 (3) | 0.0578 (17) | |
| H10 | −0.0057 | 0.6022 | 0.8288 | 0.069* | |
| C11 | 0.1315 (5) | 0.5488 (8) | 0.8632 (3) | 0.0604 (18) | |
| H11 | 0.1074 | 0.4895 | 0.8947 | 0.072* | |
| C12 | 0.2329 (5) | 0.5690 (8) | 0.8558 (3) | 0.0536 (16) | |
| H12 | 0.2779 | 0.5226 | 0.8821 | 0.064* | |
| C13 | 0.2693 (4) | 0.6560 (7) | 0.8104 (3) | 0.0453 (14) | |
| H13 | 0.3390 | 0.6686 | 0.8063 | 0.054* |
| Br1 | 0.0851 (6) | 0.0621 (5) | 0.0383 (4) | 0.0019 (4) | −0.0058 (3) | 0.0082 (3) |
| Br2 | 0.0640 (5) | 0.0757 (5) | 0.0609 (5) | −0.0265 (4) | 0.0124 (3) | 0.0054 (4) |
| O1 | 0.029 (2) | 0.079 (3) | 0.054 (3) | 0.0054 (19) | 0.0065 (19) | 0.007 (2) |
| N1 | 0.027 (2) | 0.048 (3) | 0.039 (3) | −0.0008 (19) | −0.0055 (19) | 0.001 (2) |
| N2 | 0.028 (2) | 0.045 (3) | 0.037 (3) | 0.0009 (18) | −0.0012 (19) | −0.002 (2) |
| N3 | 0.056 (3) | 0.068 (4) | 0.060 (4) | −0.006 (3) | 0.003 (3) | −0.005 (3) |
| C1 | 0.029 (3) | 0.043 (3) | 0.033 (3) | −0.004 (2) | 0.000 (2) | −0.003 (2) |
| C2 | 0.033 (3) | 0.040 (3) | 0.032 (3) | −0.001 (2) | 0.000 (2) | −0.004 (2) |
| C3 | 0.048 (3) | 0.046 (3) | 0.036 (3) | 0.007 (3) | −0.002 (3) | −0.005 (3) |
| C4 | 0.050 (3) | 0.041 (3) | 0.034 (3) | −0.002 (3) | 0.000 (3) | −0.003 (2) |
| C5 | 0.045 (3) | 0.040 (3) | 0.036 (3) | −0.007 (2) | 0.006 (3) | 0.000 (2) |
| C6 | 0.071 (5) | 0.076 (5) | 0.057 (4) | 0.012 (4) | 0.011 (4) | 0.010 (4) |
| C7 | 0.031 (3) | 0.040 (3) | 0.036 (3) | −0.001 (2) | 0.004 (2) | −0.007 (2) |
| C8 | 0.038 (3) | 0.034 (3) | 0.034 (3) | −0.002 (2) | 0.004 (2) | −0.004 (2) |
| C9 | 0.044 (3) | 0.044 (3) | 0.041 (3) | 0.001 (3) | 0.009 (3) | −0.006 (3) |
| C10 | 0.054 (4) | 0.061 (4) | 0.059 (4) | −0.008 (3) | 0.023 (3) | −0.001 (3) |
| C11 | 0.082 (5) | 0.051 (4) | 0.048 (4) | −0.004 (3) | 0.018 (3) | 0.006 (3) |
| C12 | 0.066 (4) | 0.052 (4) | 0.043 (4) | 0.001 (3) | −0.004 (3) | 0.008 (3) |
| C13 | 0.042 (3) | 0.047 (3) | 0.047 (4) | −0.001 (3) | −0.006 (3) | 0.003 (3) |
| Br1—C4 | 1.897 (6) | C4—C5 | 1.389 (8) |
| Br2—C5 | 1.907 (5) | C6—H6A | 0.9600 |
| O1—C9 | 1.354 (7) | C6—H6B | 0.9600 |
| O1—H1 | 0.8200 | C6—H6C | 0.9600 |
| N1—C7 | 1.369 (7) | C7—C8 | 1.442 (8) |
| N1—C1 | 1.382 (7) | C8—C13 | 1.402 (8) |
| N1—H1A | 0.9504 | C8—C9 | 1.408 (8) |
| N2—C7 | 1.338 (7) | C9—C10 | 1.388 (8) |
| N2—C2 | 1.398 (7) | C10—C11 | 1.392 (9) |
| N3—C1 | 1.370 (7) | C10—H10 | 0.9300 |
| N3—C5 | 1.387 (8) | C11—C12 | 1.358 (9) |
| C1—C2 | 1.415 (7) | C11—H11 | 0.9300 |
| C2—C3 | 1.394 (8) | C12—C13 | 1.355 (8) |
| C3—C4 | 1.396 (8) | C12—H12 | 0.9300 |
| C3—C6 | 1.589 (9) | C13—H13 | 0.9300 |
| Cg1···Cg2i | 3.760 (3) | Cg1···Cg3ii | 3.723 (3) |
| C9—O1—H1 | 109.5 | C3—C6—H6C | 109.5 |
| C7—N1—C1 | 107.9 (4) | H6A—C6—H6C | 109.5 |
| C7—N1—H1A | 131.3 | H6B—C6—H6C | 109.5 |
| C1—N1—H1A | 120.8 | N2—C7—N1 | 111.7 (5) |
| C7—N2—C2 | 105.9 (4) | N2—C7—C8 | 123.6 (5) |
| C1—N3—C5 | 115.6 (5) | N1—C7—C8 | 124.7 (5) |
| N3—C1—N1 | 131.4 (5) | C13—C8—C9 | 118.1 (5) |
| N3—C1—C2 | 123.1 (5) | C13—C8—C7 | 122.4 (5) |
| N1—C1—C2 | 105.6 (4) | C9—C8—C7 | 119.5 (5) |
| C3—C2—N2 | 130.1 (5) | O1—C9—C10 | 119.1 (6) |
| C3—C2—C1 | 121.0 (5) | O1—C9—C8 | 121.6 (5) |
| N2—C2—C1 | 109.0 (5) | C10—C9—C8 | 119.3 (6) |
| C2—C3—C4 | 115.5 (5) | C9—C10—C11 | 120.4 (6) |
| C2—C3—C6 | 126.1 (5) | C9—C10—H10 | 119.8 |
| C4—C3—C6 | 118.4 (5) | C11—C10—H10 | 119.8 |
| C5—C4—C3 | 122.4 (5) | C12—C11—C10 | 120.0 (6) |
| C5—C4—Br1 | 120.5 (4) | C12—C11—H11 | 120.0 |
| C3—C4—Br1 | 117.1 (4) | C10—C11—H11 | 120.0 |
| N3—C5—C4 | 122.5 (5) | C13—C12—C11 | 120.8 (6) |
| N3—C5—Br2 | 115.9 (4) | C13—C12—H12 | 119.6 |
| C4—C5—Br2 | 121.6 (4) | C11—C12—H12 | 119.6 |
| C3—C6—H6A | 109.5 | C12—C13—C8 | 121.5 (5) |
| C3—C6—H6B | 109.5 | C12—C13—H13 | 119.3 |
| H6A—C6—H6B | 109.5 | C8—C13—H13 | 119.3 |
| H··· | ||||
| N1—H1A···O1iii | 0.95 | 1.90 | 2.839 (6) | 171 |
| O1—H1···N2 | 0.82 | 1.84 | 2.573 (6) | 149 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.95 | 1.90 | 2.839 (6) | 171 |
| O1—H1⋯N2 | 0.82 | 1.84 | 2.573 (6) | 149 |
Symmetry code: (i) .