Literature DB >> 21583121

2-Meth-oxy-6-(6-methyl-1H-benzimidazol-2-yl)phenol.

Hui-Quan Xiao, Ming-Zhu Zhang, Wei Wang.   

Abstract

The mol-ecule of the title compound, C(15)H(14)N(2)O(2) is almost planar, the dihedral angle between the 6-methyl-1H-benz-imidazole plane and the 2-methoxy-phenol plane being 6.9 (2)°. An intra-molecular O-H⋯N hydrogen bond is present. Adjacent mol-ecules are linked by N-H⋯O hydrogen bonds into a three-dimensional network structure. The benzoimidazole methyl group and its attached C atom are positionally disordered in a 0.724 (4):0.276 (4) ratio.

Entities:  

Year:  2009        PMID: 21583121      PMCID: PMC2969644          DOI: 10.1107/S1600536809016523

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to imidazole and its derivatives, see: Huang et al. (2004 ▶) and to benzimidazoles, see: Perry & Wilson (1993 ▶). For related structures, see: Savall & Fontimayor (2008 ▶).

Experimental

Crystal data

C15H14N2O2 M = 254.28 Monoclinic, a = 17.986 (3) Å b = 11.4452 (16) Å c = 13.4105 (19) Å β = 104.216 (2)° V = 2676.1 (7) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.21 × 0.17 × 0.13 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.982, T max = 0.989 6836 measured reflections 2531 independent reflections 1441 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.169 S = 1.05 2531 reflections 176 parameters 3 restraints H-atom parameters constrained Δρmax = 0.20 e Å−3 Δρmin = −0.23 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809016523/hg2503sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809016523/hg2503Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H14N2O2F(000) = 1072
Mr = 254.28Dx = 1.262 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 2318 reflections
a = 17.986 (3) Åθ = 2.4–23.9°
b = 11.4452 (16) ŵ = 0.09 mm1
c = 13.4105 (19) ÅT = 293 K
β = 104.216 (2)°Block, yellow
V = 2676.1 (7) Å30.21 × 0.17 × 0.13 mm
Z = 8
Bruker APEXII CCD area-detector diffractometer2531 independent reflections
Radiation source: fine-focus sealed tube1441 reflections with I > 2σ(I)
graphiteRint = 0.031
φ and ω scansθmax = 25.7°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −21→11
Tmin = 0.982, Tmax = 0.989k = −13→13
6836 measured reflectionsl = −15→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.056Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.169H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0769P)2 + 0.8329P] where P = (Fo2 + 2Fc2)/3
2531 reflections(Δ/σ)max < 0.001
176 parametersΔρmax = 0.20 e Å3
3 restraintsΔρmin = −0.23 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
O10.34998 (10)0.96117 (16)0.14576 (12)0.0718 (6)
H10.38090.92220.18790.086*
O20.23740 (12)1.0753 (2)0.03072 (14)0.0942 (7)
N10.39603 (12)0.94335 (19)0.46813 (14)0.0644 (6)
H1A0.36890.98060.50870.077*
N20.42667 (11)0.89053 (17)0.32288 (14)0.0568 (5)
C10.31924 (14)1.0273 (2)0.30233 (18)0.0568 (6)
C20.30615 (14)1.0242 (2)0.19534 (18)0.0574 (6)
C30.24529 (16)1.0877 (2)0.1342 (2)0.0691 (8)
C40.20037 (17)1.1559 (3)0.1795 (2)0.0839 (9)
H40.16051.19920.13890.101*
C50.21404 (19)1.1607 (3)0.2856 (3)0.0928 (10)
H50.18341.20750.31580.111*
C60.27225 (17)1.0974 (3)0.3463 (2)0.0797 (9)
H60.28071.10090.41750.096*
C70.38041 (14)0.9559 (2)0.36368 (17)0.0554 (6)
C80.1738 (2)1.1332 (4)−0.0374 (3)0.1217 (14)
H8A0.17481.1176−0.10740.183*
H8B0.17761.2158−0.02510.183*
H8C0.12661.1047−0.02520.183*
C90.45596 (15)0.8650 (2)0.49645 (19)0.0659 (7)
C100.47445 (14)0.8322 (2)0.40546 (19)0.0618 (7)
C110.53215 (16)0.7501 (3)0.4079 (2)0.0806 (9)
H110.54540.72700.34800.097*
C140.49349 (18)0.8175 (3)0.5915 (2)0.0865 (10)
H140.48070.83980.65190.104*
C12A0.56835 (19)0.7052 (3)0.5008 (3)0.1024 (16)0.724 (4)
H12A0.60720.65090.50330.123*0.724 (4)
C13A0.55061 (19)0.7359 (3)0.5920 (3)0.0988 (17)0.724 (4)
C15A0.5957 (3)0.6706 (5)0.6876 (3)0.1041 (15)0.724 (4)
H15A0.57970.69740.74690.156*0.724 (4)
H15B0.64950.68540.69690.156*0.724 (4)
H15C0.58610.58830.67880.156*0.724 (4)
C13B0.56835 (19)0.7052 (3)0.5008 (3)0.0988 (17)0.276 (4)
C12B0.55061 (19)0.7359 (3)0.5920 (3)0.1024 (16)0.276 (4)
H12B0.57690.70180.65360.123*0.276 (4)
C15B0.6306 (6)0.6287 (11)0.5397 (9)0.1041 (15)0.276 (4)
H15G0.64980.59920.48380.156*0.276 (4)
H15D0.61360.56480.57480.156*0.276 (4)
H15E0.67070.67030.58680.156*0.276 (4)
U11U22U33U12U13U23
O10.0768 (12)0.0922 (13)0.0482 (10)0.0351 (10)0.0186 (9)0.0116 (9)
O20.0935 (15)0.1259 (18)0.0566 (12)0.0478 (13)0.0059 (10)0.0170 (11)
N10.0690 (14)0.0807 (15)0.0447 (12)−0.0114 (12)0.0164 (10)0.0033 (11)
N20.0514 (12)0.0654 (13)0.0528 (12)0.0031 (10)0.0112 (10)0.0091 (10)
C10.0562 (15)0.0652 (15)0.0518 (14)0.0051 (13)0.0186 (12)0.0053 (12)
C20.0553 (14)0.0654 (15)0.0550 (15)0.0130 (13)0.0205 (12)0.0091 (12)
C30.0693 (17)0.0807 (19)0.0588 (16)0.0191 (15)0.0185 (14)0.0146 (14)
C40.0738 (19)0.094 (2)0.088 (2)0.0316 (17)0.0277 (17)0.0206 (17)
C50.097 (2)0.103 (2)0.091 (2)0.038 (2)0.046 (2)0.0105 (19)
C60.090 (2)0.094 (2)0.0645 (17)0.0202 (18)0.0352 (16)0.0058 (15)
C70.0560 (14)0.0641 (15)0.0473 (14)−0.0055 (13)0.0147 (12)0.0061 (11)
C80.116 (3)0.151 (3)0.080 (2)0.059 (3)−0.010 (2)0.031 (2)
C90.0529 (15)0.0782 (18)0.0590 (16)−0.0160 (14)−0.0009 (13)0.0180 (13)
C100.0528 (15)0.0712 (17)0.0565 (16)−0.0081 (13)0.0042 (12)0.0166 (13)
C110.0611 (17)0.086 (2)0.087 (2)0.0102 (16)0.0036 (15)0.0235 (16)
C140.079 (2)0.112 (2)0.0576 (17)−0.0321 (19)−0.0033 (15)0.0269 (16)
C12A0.080 (4)0.103 (4)0.116 (3)0.015 (3)0.006 (3)0.042 (3)
C13A0.070 (3)0.129 (5)0.077 (2)−0.016 (4)−0.020 (2)0.055 (3)
C15A0.101 (3)0.131 (4)0.072 (3)0.028 (3)0.005 (2)0.034 (2)
C13B0.070 (3)0.129 (5)0.077 (2)−0.016 (4)−0.020 (2)0.055 (3)
C12B0.080 (4)0.103 (4)0.116 (3)0.015 (3)0.006 (3)0.042 (3)
C15B0.101 (3)0.131 (4)0.072 (3)0.028 (3)0.005 (2)0.034 (2)
O1—C21.357 (3)C8—H8A0.9600
O1—H10.8200C8—H8B0.9600
O2—C31.367 (3)C8—H8C0.9600
O2—C81.438 (3)C9—C101.393 (4)
N1—C71.367 (3)C9—C141.397 (3)
N1—C91.382 (3)C10—C111.394 (4)
N1—H1A0.9194C11—C12A1.357 (4)
N2—C71.332 (3)C11—H110.9300
N2—C101.394 (3)C14—C13A1.388 (5)
C1—C21.396 (3)C14—H140.9300
C1—C61.397 (4)C12A—C13A1.383 (5)
C1—C71.453 (3)C12A—H12A0.9300
C2—C31.399 (3)C13A—C15A1.531 (4)
C3—C41.368 (4)C15A—H15A0.9600
C4—C51.384 (4)C15A—H15B0.9600
C4—H40.9300C15A—H15C0.9600
C5—C61.366 (4)C15B—H15G0.9600
C5—H50.9300C15B—H15D0.9600
C6—H60.9300C15B—H15E0.9600
C2—O1—H1109.2O2—C8—H8C109.5
C3—O2—C8117.7 (2)H8A—C8—H8C109.5
C7—N1—C9107.4 (2)H8B—C8—H8C109.5
C7—N1—H1A123.5N1—C9—C10105.8 (2)
C9—N1—H1A129.0N1—C9—C14132.3 (3)
C7—N2—C10105.6 (2)C10—C9—C14121.9 (3)
C2—C1—C6118.8 (2)C9—C10—C11119.8 (2)
C2—C1—C7118.8 (2)C9—C10—N2109.5 (2)
C6—C1—C7122.5 (2)C11—C10—N2130.7 (3)
O1—C2—C1123.0 (2)C12A—C11—C10117.6 (3)
O1—C2—C3117.0 (2)C12A—C11—H11121.2
C1—C2—C3120.0 (2)C10—C11—H11121.2
O2—C3—C4125.8 (2)C13A—C14—C9117.3 (3)
O2—C3—C2114.3 (2)C13A—C14—H14121.4
C4—C3—C2119.9 (2)C9—C14—H14121.4
C3—C4—C5120.3 (3)C11—C12A—C13A123.6 (3)
C3—C4—H4119.9C11—C12A—H12A118.2
C5—C4—H4119.9C13A—C12A—H12A118.2
C6—C5—C4120.5 (3)C12A—C13A—C14119.8 (3)
C6—C5—H5119.7C12A—C13A—C15A115.3 (4)
C4—C5—H5119.7C14—C13A—C15A124.9 (4)
C5—C6—C1120.6 (3)C13A—C15A—H15A109.5
C5—C6—H6119.7C13A—C15A—H15B109.5
C1—C6—H6119.7H15A—C15A—H15B109.5
N2—C7—N1111.7 (2)C13A—C15A—H15C109.5
N2—C7—C1123.1 (2)H15A—C15A—H15C109.5
N1—C7—C1125.2 (2)H15B—C15A—H15C109.5
O2—C8—H8A109.5H15G—C15B—H15D109.5
O2—C8—H8B109.5H15G—C15B—H15E109.5
H8A—C8—H8B109.5H15D—C15B—H15E109.5
D—H···AD—HH···AD···AD—H···A
O1—H1···N20.821.832.567 (2)148
N1—H1A···O2i0.922.543.173 (3)127
N1—H1A···O1i0.922.062.920 (3)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N20.821.832.567 (2)148
N1—H1A⋯O2i0.922.543.173 (3)127
N1—H1A⋯O1i0.922.062.920 (3)155

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  A new route to supramolecular isomers via molecular templating: nanosized molecular polygons of copper(I) 2-methylimidazolates.

Authors:  Xiao-Chun Huang; Jie-Peng Zhang; Xiao-Ming Chen
Journal:  J Am Chem Soc       Date:  2004-10-20       Impact factor: 15.419

  2 in total
  2 in total

1.  2-Methyl-6-(6-methyl-1H-benzimidazol-2-yl)phenol-2-methyl-6-(5-methyl-1H-benzimidazol-2-yl)phenol (3/1).

Authors:  Naser Eltaher Eltayeb; Siang Guan Teoh; Rohana Adnan; Hoong-Kun Fun; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-28

2.  2-(5,6-Dibromo-7-methyl-3H-imidazo[4,5-b]pyridin-2-yl)phenol.

Authors:  Haixia Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-13
  2 in total

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