| Literature DB >> 21589147 |
Hadi Kargar, Reza Kia, Mehmet Akkurt, Orhan Büyükgüngör.
Abstract
In the title compound, C(8)H(8)ClN(3)OS, the whole mol-ecule assumes a planar structure, with an r.m.s. deviation of 0.108 (2) Å, and an intra-molecular O-H⋯N hydrogen bond generates and S(6) and ring motif. In the crystal structure, each of two pairs of inter-molecular N-H⋯S hydrogen bonds connects two mol-ecules, forming inversion dimers with R(2) (2)(8) motifs.Entities:
Year: 2010 PMID: 21589147 PMCID: PMC3009088 DOI: 10.1107/S1600536810043448
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H8ClN3OS | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 8344 reflections |
| θ = 1.7–26.2° | |
| µ = 0.55 mm−1 | |
| β = 104.164 (6)° | Prism, colourless |
| 0.52 × 0.33 × 0.08 mm | |
| Stoe IPDS II diffractometer | 1895 independent reflections |
| Radiation source: sealed X-ray tube, 12 x 0.4 mm long-fine focus | 1524 reflections with |
| plane graphite | |
| Detector resolution: 6.67 pixels mm-1 | θmax = 25.6°, θmin = 1.7° |
| ω scans | |
| Absorption correction: integration ( | |
| 4469 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1895 reflections | (Δ/σ)max < 0.001 |
| 128 parameters | Δρmax = 0.20 e Å−3 |
| 0 restraints | Δρmin = −0.36 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement on |
| Cl1 | 0.36123 (17) | 0.20555 (4) | −0.30970 (10) | 0.0868 (3) | |
| S1 | 0.15507 (9) | 0.01021 (3) | 0.79551 (8) | 0.0559 (2) | |
| O1 | 0.8537 (3) | 0.13549 (11) | 0.4272 (3) | 0.0750 (8) | |
| N1 | 0.4525 (3) | 0.08332 (9) | 0.4467 (3) | 0.0489 (6) | |
| N2 | 0.3002 (3) | 0.05468 (10) | 0.5260 (3) | 0.0523 (6) | |
| N3 | 0.5874 (3) | 0.04298 (10) | 0.7883 (3) | 0.0524 (7) | |
| C1 | 0.4996 (4) | 0.13306 (11) | 0.1830 (3) | 0.0493 (8) | |
| C2 | 0.7333 (4) | 0.15067 (12) | 0.2573 (4) | 0.0573 (8) | |
| C3 | 0.8480 (5) | 0.18395 (14) | 0.1559 (4) | 0.0687 (10) | |
| C4 | 0.7368 (6) | 0.20095 (13) | −0.0164 (4) | 0.0702 (10) | |
| C5 | 0.5049 (5) | 0.18372 (12) | −0.0912 (4) | 0.0604 (9) | |
| C6 | 0.3886 (5) | 0.15099 (11) | 0.0062 (3) | 0.0542 (8) | |
| C7 | 0.3665 (4) | 0.09979 (11) | 0.2818 (3) | 0.0507 (8) | |
| C8 | 0.3636 (4) | 0.03756 (11) | 0.6999 (3) | 0.0454 (7) | |
| H1 | 0.76270 | 0.12040 | 0.48000 | 0.1120* | |
| H2 | 0.15960 | 0.04740 | 0.46260 | 0.0630* | |
| H3 | 1.00350 | 0.19500 | 0.20550 | 0.0830* | |
| H3A | 0.68790 | 0.05710 | 0.73440 | 0.0630* | |
| H3B | 0.63280 | 0.03240 | 0.89980 | 0.0630* | |
| H4 | 0.81520 | 0.22370 | −0.08260 | 0.0840* | |
| H6 | 0.23310 | 0.14030 | −0.04510 | 0.0650* | |
| H7 | 0.21210 | 0.08970 | 0.22430 | 0.0610* |
| Cl1 | 0.1118 (7) | 0.0820 (6) | 0.0700 (4) | 0.0054 (5) | 0.0287 (4) | 0.0188 (4) |
| S1 | 0.0349 (3) | 0.0795 (5) | 0.0526 (3) | −0.0048 (3) | 0.0096 (2) | 0.0063 (3) |
| O1 | 0.0458 (10) | 0.0951 (17) | 0.0791 (12) | −0.0077 (10) | 0.0058 (9) | 0.0132 (11) |
| N1 | 0.0379 (9) | 0.0554 (12) | 0.0544 (10) | −0.0011 (8) | 0.0131 (8) | 0.0019 (9) |
| N2 | 0.0336 (9) | 0.0683 (14) | 0.0529 (10) | −0.0059 (9) | 0.0065 (8) | 0.0074 (9) |
| N3 | 0.0334 (9) | 0.0742 (15) | 0.0485 (10) | −0.0031 (9) | 0.0079 (7) | 0.0017 (9) |
| C1 | 0.0447 (12) | 0.0466 (14) | 0.0597 (13) | 0.0017 (10) | 0.0189 (10) | −0.0007 (10) |
| C2 | 0.0453 (12) | 0.0558 (16) | 0.0729 (15) | 0.0009 (11) | 0.0186 (11) | 0.0020 (12) |
| C3 | 0.0489 (14) | 0.0623 (18) | 0.100 (2) | −0.0044 (12) | 0.0281 (14) | 0.0079 (15) |
| C4 | 0.0725 (17) | 0.0577 (18) | 0.0926 (19) | 0.0020 (14) | 0.0438 (15) | 0.0108 (15) |
| C5 | 0.0729 (17) | 0.0490 (15) | 0.0653 (14) | 0.0056 (13) | 0.0283 (12) | 0.0030 (11) |
| C6 | 0.0540 (13) | 0.0505 (15) | 0.0595 (12) | 0.0029 (11) | 0.0168 (10) | −0.0014 (11) |
| C7 | 0.0403 (12) | 0.0544 (15) | 0.0570 (12) | 0.0002 (10) | 0.0111 (10) | 0.0015 (11) |
| C8 | 0.0344 (10) | 0.0510 (14) | 0.0505 (11) | 0.0009 (9) | 0.0096 (9) | −0.0029 (10) |
| Cl1—C5 | 1.743 (3) | C1—C2 | 1.404 (4) |
| S1—C8 | 1.690 (2) | C1—C6 | 1.405 (3) |
| O1—C2 | 1.357 (4) | C1—C7 | 1.438 (3) |
| O1—H1 | 0.8200 | C2—C3 | 1.383 (4) |
| N1—N2 | 1.368 (3) | C3—C4 | 1.370 (4) |
| N1—C7 | 1.289 (3) | C4—C5 | 1.393 (5) |
| N2—C8 | 1.343 (3) | C5—C6 | 1.361 (4) |
| N3—C8 | 1.319 (3) | C3—H3 | 0.9300 |
| N2—H2 | 0.8600 | C4—H4 | 0.9300 |
| N3—H3A | 0.8600 | C6—H6 | 0.9300 |
| N3—H3B | 0.8600 | C7—H7 | 0.9300 |
| Cl1···C5i | 3.606 (3) | C7···C8vi | 3.598 (4) |
| S1···N3ii | 3.387 (2) | C7···N3vi | 3.440 (4) |
| S1···N2iii | 3.491 (2) | C7···C3ii | 3.550 (4) |
| S1···N3iv | 3.390 (2) | C8···C7vi | 3.598 (4) |
| S1···H3Aii | 2.8700 | C8···C6vii | 3.530 (3) |
| S1···H2iii | 2.7000 | C8···N1vi | 3.339 (3) |
| S1···H3Biv | 2.5500 | C3···H7v | 3.0300 |
| S1···H7iii | 3.1700 | C3···H4viii | 2.9900 |
| O1···N1 | 2.681 (3) | C7···H3ii | 3.0500 |
| O1···N2v | 3.168 (3) | C7···H1 | 2.4800 |
| O1···H2v | 2.7100 | H1···N1 | 1.9700 |
| N1···O1 | 2.681 (3) | H1···C7 | 2.4800 |
| N1···N3 | 2.693 (3) | H1···H3A | 2.5600 |
| N1···C8vi | 3.339 (3) | H2···O1ii | 2.7100 |
| N2···O1ii | 3.168 (3) | H2···H7 | 2.1500 |
| N2···S1iii | 3.491 (2) | H2···S1iii | 2.7000 |
| N3···C6vii | 3.398 (3) | H3···C7v | 3.0500 |
| N3···S1iv | 3.390 (2) | H3A···S1v | 2.8700 |
| N3···S1v | 3.387 (2) | H3A···N1 | 2.3600 |
| N3···N1 | 2.693 (3) | H3A···H1 | 2.5600 |
| N3···C7vi | 3.440 (4) | H3B···S1iv | 2.5500 |
| N1···H1 | 1.9700 | H4···C3i | 2.9900 |
| N1···H3A | 2.3600 | H6···H7 | 2.4000 |
| C3···C7v | 3.550 (4) | H7···C3ii | 3.0300 |
| C5···Cl1viii | 3.606 (3) | H7···H2 | 2.1500 |
| C6···N3ix | 3.398 (3) | H7···H6 | 2.4000 |
| C6···C8ix | 3.530 (3) | H7···S1iii | 3.1700 |
| C2—O1—H1 | 109.00 | Cl1—C5—C4 | 119.6 (2) |
| N2—N1—C7 | 115.9 (2) | Cl1—C5—C6 | 119.9 (2) |
| N1—N2—C8 | 122.0 (2) | C4—C5—C6 | 120.5 (3) |
| C8—N2—H2 | 119.00 | C1—C6—C5 | 121.1 (3) |
| N1—N2—H2 | 119.00 | N1—C7—C1 | 122.7 (2) |
| H3A—N3—H3B | 120.00 | N2—C8—N3 | 118.1 (2) |
| C8—N3—H3A | 120.00 | S1—C8—N2 | 118.92 (18) |
| C8—N3—H3B | 120.00 | S1—C8—N3 | 123.01 (18) |
| C2—C1—C6 | 118.0 (2) | C2—C3—H3 | 119.00 |
| C6—C1—C7 | 118.8 (2) | C4—C3—H3 | 119.00 |
| C2—C1—C7 | 123.2 (2) | C3—C4—H4 | 120.00 |
| O1—C2—C1 | 121.9 (2) | C5—C4—H4 | 120.00 |
| C1—C2—C3 | 120.0 (3) | C1—C6—H6 | 119.00 |
| O1—C2—C3 | 118.1 (2) | C5—C6—H6 | 119.00 |
| C2—C3—C4 | 121.2 (3) | N1—C7—H7 | 119.00 |
| C3—C4—C5 | 119.2 (3) | C1—C7—H7 | 119.00 |
| C7—N1—N2—C8 | −176.7 (2) | C6—C1—C2—C3 | −0.9 (4) |
| N2—N1—C7—C1 | 176.5 (2) | C7—C1—C2—O1 | 2.5 (4) |
| N1—N2—C8—S1 | 171.99 (18) | O1—C2—C3—C4 | −179.8 (3) |
| N1—N2—C8—N3 | −8.0 (4) | C1—C2—C3—C4 | 0.9 (5) |
| C7—C1—C2—C3 | −178.2 (3) | C2—C3—C4—C5 | −0.8 (5) |
| C2—C1—C6—C5 | 1.0 (4) | C3—C4—C5—Cl1 | 179.5 (2) |
| C7—C1—C6—C5 | 178.3 (3) | C3—C4—C5—C6 | 0.8 (5) |
| C2—C1—C7—N1 | −0.3 (4) | Cl1—C5—C6—C1 | −179.6 (2) |
| C6—C1—C7—N1 | −177.6 (2) | C4—C5—C6—C1 | −0.9 (4) |
| C6—C1—C2—O1 | 179.8 (2) |
| H··· | ||||
| O1—H1···N1 | 0.82 | 1.97 | 2.681 (3) | 144 |
| N2—H2···S1iii | 0.86 | 2.70 | 3.491 (2) | 153 |
| N3—H3A···S1v | 0.86 | 2.87 | 3.387 (2) | 120 |
| N3—H3A···N1 | 0.86 | 2.36 | 2.693 (3) | 103 |
| N3—H3B···S1iv | 0.86 | 2.55 | 3.390 (2) | 167 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯S1i | 0.86 | 2.70 | 3.491 (2) | 153 |
| N3—H3 | 0.86 | 2.87 | 3.387 (2) | 120 |
| N3—H3 | 0.86 | 2.36 | 2.693 (3) | 103 |
| N3—H3 | 0.86 | 2.55 | 3.390 (2) | 167 |
Symmetry codes: (i) ; (ii) ; (iii) .