| Literature DB >> 21588751 |
K N Vennila, K Prabha, M Manoj, K J Rajendra Prasad, D Velmurugan.
Abstract
In the title compound, C(25)H(19)ClN(2), the dibenzo[b,h][1,6]naphthyridine system is planar to within 0.16 (2) Å, and the chloro-phenyl ring is inclined to it by 82.53 (7)°. In the crystal, mol-ecules are linked by C-H⋯N hydrogen bonds, forming chains propagating in [100]. There are also a number of weak π-π stacking inter-actions present [centroid-centroid distances = 3.8531 (1) and 3.7631 (1) Å].Entities:
Year: 2010 PMID: 21588751 PMCID: PMC3007939 DOI: 10.1107/S1600536810030576
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C25H19ClN2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4797 reflections | |
| θ = 1.5–28.5° | |
| µ = 0.21 mm−1 | |
| α = 93.755 (3)° | |
| β = 103.099 (3)° | Block, yellow |
| γ = 102.074 (3)° | 0.27 × 0.25 × 0.23 mm |
| Bruker SMART APEXII area-detector diffractometer | 4771 independent reflections |
| Radiation source: fine-focus sealed tube | 3514 reflections with |
| graphite | |
| ω and φ scans | θmax = 28.5°, θmin = 1.5° |
| Absorption correction: multi-scan ( | |
| 17317 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4771 reflections | (Δ/σ)max = 0.001 |
| 255 parameters | Δρmax = 0.32 e Å−3 |
| 0 restraints | Δρmin = −0.51 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| Cl1 | 0.22259 (9) | 0.49217 (5) | 0.41457 (4) | 0.0809 (2) | |
| C9 | 0.1060 (2) | 0.63949 (13) | 0.20011 (10) | 0.0345 (3) | |
| C14 | −0.0361 (2) | 0.61889 (13) | 0.25997 (11) | 0.0354 (3) | |
| N11 | 0.1756 (2) | 0.87266 (11) | 0.24184 (9) | 0.0396 (3) | |
| C10 | 0.2149 (2) | 0.77063 (13) | 0.19709 (10) | 0.0353 (3) | |
| C13 | −0.0816 (2) | 0.72702 (14) | 0.30668 (11) | 0.0371 (3) | |
| C6 | 0.3810 (2) | 0.79371 (14) | 0.14465 (10) | 0.0367 (3) | |
| C1 | 0.4188 (2) | 0.68758 (14) | 0.09475 (11) | 0.0382 (3) | |
| C12 | 0.0265 (2) | 0.85236 (14) | 0.29330 (11) | 0.0379 (3) | |
| N7 | 0.2977 (2) | 0.56271 (12) | 0.09035 (9) | 0.0405 (3) | |
| C5 | 0.5087 (3) | 0.91727 (15) | 0.14455 (12) | 0.0427 (3) | |
| H5 | 0.4829 | 0.9885 | 0.1770 | 0.051* | |
| C21 | −0.1424 (2) | 0.48827 (13) | 0.28004 (11) | 0.0383 (3) | |
| C15 | −0.2299 (3) | 0.71701 (15) | 0.36619 (12) | 0.0426 (3) | |
| H15 | −0.2983 | 0.6356 | 0.3770 | 0.051* | |
| C2 | 0.5826 (3) | 0.70513 (17) | 0.04574 (13) | 0.0478 (4) | |
| H2 | 0.6075 | 0.6347 | 0.0119 | 0.057* | |
| C18 | −0.0219 (3) | 0.96186 (15) | 0.33756 (12) | 0.0459 (4) | |
| H18 | 0.0465 | 1.0444 | 0.3289 | 0.055* | |
| C8 | 0.1537 (2) | 0.53873 (14) | 0.13957 (11) | 0.0376 (3) | |
| C16 | −0.2740 (3) | 0.82394 (16) | 0.40769 (12) | 0.0435 (4) | |
| C4 | 0.6710 (3) | 0.93469 (16) | 0.09730 (12) | 0.0463 (4) | |
| C26 | −0.0401 (3) | 0.42446 (15) | 0.35054 (12) | 0.0450 (4) | |
| C17 | −0.1666 (3) | 0.94743 (16) | 0.39226 (12) | 0.0471 (4) | |
| H17 | −0.1960 | 1.0206 | 0.4204 | 0.057* | |
| C22 | −0.3525 (3) | 0.42820 (16) | 0.23021 (15) | 0.0529 (4) | |
| H22 | −0.4273 | 0.4693 | 0.1833 | 0.063* | |
| C3 | 0.7064 (3) | 0.82702 (17) | 0.04798 (13) | 0.0512 (4) | |
| H3 | 0.8162 | 0.8381 | 0.0160 | 0.061* | |
| C23 | −0.4512 (3) | 0.30820 (18) | 0.24972 (17) | 0.0622 (5) | |
| H23 | −0.5900 | 0.2684 | 0.2146 | 0.075* | |
| C19 | 0.0335 (3) | 0.39954 (15) | 0.12548 (14) | 0.0502 (4) | |
| H19A | 0.0790 | 0.3520 | 0.0779 | 0.075* | |
| H19B | −0.1181 | 0.3942 | 0.1043 | 0.075* | |
| H19C | 0.0630 | 0.3635 | 0.1853 | 0.075* | |
| C25 | −0.1401 (3) | 0.30526 (16) | 0.37131 (14) | 0.0563 (5) | |
| H25 | −0.0683 | 0.2646 | 0.4195 | 0.068* | |
| C24 | −0.3463 (3) | 0.24775 (17) | 0.32009 (15) | 0.0583 (5) | |
| H24 | −0.4144 | 0.1676 | 0.3334 | 0.070* | |
| C20 | 0.8124 (3) | 1.06674 (18) | 0.10020 (15) | 0.0613 (5) | |
| H20A | 0.9161 | 1.0606 | 0.0635 | 0.092* | 0.50 |
| H20B | 0.8857 | 1.0999 | 0.1658 | 0.092* | 0.50 |
| H20C | 0.7254 | 1.1239 | 0.0732 | 0.092* | 0.50 |
| H20D | 0.7687 | 1.1290 | 0.1382 | 0.092* | 0.50 |
| H20E | 0.7992 | 1.0897 | 0.0359 | 0.092* | 0.50 |
| H20F | 0.9594 | 1.0657 | 0.1284 | 0.092* | 0.50 |
| C27 | −0.4337 (3) | 0.81378 (19) | 0.46916 (15) | 0.0603 (5) | |
| H27A | −0.5716 | 0.8179 | 0.4303 | 0.090* | |
| H27B | −0.3858 | 0.8839 | 0.5203 | 0.090* | |
| H27C | −0.4454 | 0.7331 | 0.4960 | 0.090* |
| Cl1 | 0.0751 (4) | 0.0620 (3) | 0.0805 (4) | −0.0032 (2) | −0.0189 (3) | 0.0237 (3) |
| C9 | 0.0369 (7) | 0.0290 (6) | 0.0383 (7) | 0.0081 (5) | 0.0095 (6) | 0.0067 (5) |
| C14 | 0.0374 (7) | 0.0284 (7) | 0.0415 (8) | 0.0080 (5) | 0.0105 (6) | 0.0080 (6) |
| N11 | 0.0477 (7) | 0.0294 (6) | 0.0430 (7) | 0.0072 (5) | 0.0149 (6) | 0.0055 (5) |
| C10 | 0.0388 (7) | 0.0309 (7) | 0.0359 (7) | 0.0069 (6) | 0.0089 (6) | 0.0071 (5) |
| C13 | 0.0415 (8) | 0.0318 (7) | 0.0391 (8) | 0.0092 (6) | 0.0111 (6) | 0.0063 (6) |
| C6 | 0.0393 (7) | 0.0333 (7) | 0.0366 (7) | 0.0048 (6) | 0.0098 (6) | 0.0074 (6) |
| C1 | 0.0400 (8) | 0.0353 (7) | 0.0388 (8) | 0.0057 (6) | 0.0110 (6) | 0.0062 (6) |
| C12 | 0.0451 (8) | 0.0318 (7) | 0.0372 (7) | 0.0093 (6) | 0.0103 (6) | 0.0051 (6) |
| N7 | 0.0450 (7) | 0.0326 (6) | 0.0461 (7) | 0.0072 (5) | 0.0171 (6) | 0.0044 (5) |
| C5 | 0.0490 (9) | 0.0339 (7) | 0.0428 (8) | 0.0014 (6) | 0.0137 (7) | 0.0050 (6) |
| C21 | 0.0423 (8) | 0.0293 (7) | 0.0478 (8) | 0.0088 (6) | 0.0194 (6) | 0.0061 (6) |
| C15 | 0.0464 (8) | 0.0366 (8) | 0.0481 (9) | 0.0089 (6) | 0.0180 (7) | 0.0078 (6) |
| C2 | 0.0514 (9) | 0.0449 (9) | 0.0506 (9) | 0.0080 (7) | 0.0230 (7) | 0.0033 (7) |
| C18 | 0.0616 (10) | 0.0308 (7) | 0.0475 (9) | 0.0104 (7) | 0.0181 (8) | 0.0046 (6) |
| C8 | 0.0411 (8) | 0.0308 (7) | 0.0416 (8) | 0.0083 (6) | 0.0114 (6) | 0.0057 (6) |
| C16 | 0.0455 (8) | 0.0433 (8) | 0.0435 (8) | 0.0122 (7) | 0.0131 (7) | 0.0031 (7) |
| C4 | 0.0469 (9) | 0.0426 (8) | 0.0446 (9) | −0.0026 (7) | 0.0128 (7) | 0.0081 (7) |
| C26 | 0.0552 (9) | 0.0343 (7) | 0.0445 (9) | 0.0064 (7) | 0.0134 (7) | 0.0069 (6) |
| C17 | 0.0599 (10) | 0.0380 (8) | 0.0470 (9) | 0.0170 (7) | 0.0165 (8) | 0.0001 (7) |
| C22 | 0.0446 (9) | 0.0416 (9) | 0.0728 (12) | 0.0090 (7) | 0.0142 (8) | 0.0142 (8) |
| C3 | 0.0487 (9) | 0.0539 (10) | 0.0520 (10) | 0.0013 (7) | 0.0239 (8) | 0.0071 (8) |
| C23 | 0.0433 (9) | 0.0473 (10) | 0.0937 (15) | −0.0002 (8) | 0.0221 (10) | 0.0087 (10) |
| C19 | 0.0589 (10) | 0.0321 (7) | 0.0617 (11) | 0.0036 (7) | 0.0268 (8) | −0.0009 (7) |
| C25 | 0.0803 (13) | 0.0368 (8) | 0.0536 (10) | 0.0088 (8) | 0.0216 (9) | 0.0145 (7) |
| C24 | 0.0701 (12) | 0.0359 (8) | 0.0749 (13) | 0.0029 (8) | 0.0367 (10) | 0.0121 (8) |
| C20 | 0.0643 (12) | 0.0476 (10) | 0.0667 (12) | −0.0099 (8) | 0.0265 (10) | 0.0076 (9) |
| C27 | 0.0630 (11) | 0.0554 (11) | 0.0694 (12) | 0.0128 (9) | 0.0334 (10) | −0.0011 (9) |
| Cl1—C26 | 1.7342 (18) | C8—C19 | 1.504 (2) |
| C9—C14 | 1.399 (2) | C16—C17 | 1.413 (2) |
| C9—C10 | 1.4381 (19) | C16—C27 | 1.507 (2) |
| C9—C8 | 1.465 (2) | C4—C3 | 1.397 (2) |
| C14—C13 | 1.414 (2) | C4—C20 | 1.507 (2) |
| C14—C21 | 1.4978 (19) | C26—C25 | 1.386 (2) |
| N11—C10 | 1.3272 (18) | C17—H17 | 0.9300 |
| N11—C12 | 1.3449 (19) | C22—C23 | 1.384 (2) |
| C10—C6 | 1.448 (2) | C22—H22 | 0.9300 |
| C13—C12 | 1.422 (2) | C3—H3 | 0.9300 |
| C13—C15 | 1.425 (2) | C23—C24 | 1.365 (3) |
| C6—C1 | 1.395 (2) | C23—H23 | 0.9300 |
| C6—C5 | 1.405 (2) | C19—H19A | 0.9600 |
| C1—N7 | 1.3888 (19) | C19—H19B | 0.9600 |
| C1—C2 | 1.399 (2) | C19—H19C | 0.9600 |
| C12—C18 | 1.419 (2) | C25—C24 | 1.374 (3) |
| N7—C8 | 1.2966 (19) | C25—H25 | 0.9300 |
| C5—C4 | 1.374 (2) | C24—H24 | 0.9300 |
| C5—H5 | 0.9300 | C20—H20A | 0.9600 |
| C21—C26 | 1.382 (2) | C20—H20B | 0.9600 |
| C21—C22 | 1.394 (2) | C20—H20C | 0.9600 |
| C15—C16 | 1.365 (2) | C20—H20D | 0.9600 |
| C15—H15 | 0.9300 | C20—H20E | 0.9600 |
| C2—C3 | 1.374 (2) | C20—H20F | 0.9600 |
| C2—H2 | 0.9300 | C27—H27A | 0.9600 |
| C18—C17 | 1.353 (2) | C27—H27B | 0.9600 |
| C18—H18 | 0.9300 | C27—H27C | 0.9600 |
| C14—C9—C10 | 117.59 (12) | C18—C17—H17 | 119.2 |
| C14—C9—C8 | 125.62 (13) | C16—C17—H17 | 119.2 |
| C10—C9—C8 | 116.79 (13) | C23—C22—C21 | 120.83 (17) |
| C9—C14—C13 | 118.93 (13) | C23—C22—H22 | 119.6 |
| C9—C14—C21 | 124.24 (12) | C21—C22—H22 | 119.6 |
| C13—C14—C21 | 116.82 (13) | C2—C3—C4 | 121.42 (15) |
| C10—N11—C12 | 118.23 (12) | C2—C3—H3 | 119.3 |
| N11—C10—C9 | 123.65 (13) | C4—C3—H3 | 119.3 |
| N11—C10—C6 | 117.60 (13) | C24—C23—C22 | 120.50 (18) |
| C9—C10—C6 | 118.73 (12) | C24—C23—H23 | 119.8 |
| C14—C13—C12 | 118.07 (13) | C22—C23—H23 | 119.8 |
| C14—C13—C15 | 123.54 (13) | C8—C19—H19A | 109.5 |
| C12—C13—C15 | 118.39 (13) | C8—C19—H19B | 109.5 |
| C1—C6—C5 | 119.07 (14) | H19A—C19—H19B | 109.5 |
| C1—C6—C10 | 118.10 (13) | C8—C19—H19C | 109.5 |
| C5—C6—C10 | 122.80 (14) | H19A—C19—H19C | 109.5 |
| N7—C1—C6 | 122.51 (13) | H19B—C19—H19C | 109.5 |
| N7—C1—C2 | 117.55 (13) | C24—C25—C26 | 119.42 (17) |
| C6—C1—C2 | 119.94 (14) | C24—C25—H25 | 120.3 |
| N11—C12—C18 | 118.06 (13) | C26—C25—H25 | 120.3 |
| N11—C12—C13 | 123.19 (13) | C23—C24—C25 | 120.02 (16) |
| C18—C12—C13 | 118.73 (14) | C23—C24—H24 | 120.0 |
| C8—N7—C1 | 120.50 (13) | C25—C24—H24 | 120.0 |
| C4—C5—C6 | 121.15 (15) | C4—C20—H20A | 109.5 |
| C4—C5—H5 | 119.4 | C4—C20—H20B | 109.5 |
| C6—C5—H5 | 119.4 | H20A—C20—H20B | 109.5 |
| C26—C21—C22 | 117.31 (14) | C4—C20—H20C | 109.5 |
| C26—C21—C14 | 121.67 (14) | H20A—C20—H20C | 109.5 |
| C22—C21—C14 | 120.98 (14) | H20B—C20—H20C | 109.5 |
| C16—C15—C13 | 121.68 (15) | C4—C20—H20D | 109.5 |
| C16—C15—H15 | 119.2 | H20A—C20—H20D | 141.1 |
| C13—C15—H15 | 119.2 | H20B—C20—H20D | 56.3 |
| C3—C2—C1 | 119.59 (15) | H20C—C20—H20D | 56.3 |
| C3—C2—H2 | 120.2 | C4—C20—H20E | 109.5 |
| C1—C2—H2 | 120.2 | H20A—C20—H20E | 56.3 |
| C17—C18—C12 | 120.70 (15) | H20B—C20—H20E | 141.1 |
| C17—C18—H18 | 119.6 | H20C—C20—H20E | 56.3 |
| C12—C18—H18 | 119.6 | H20D—C20—H20E | 109.5 |
| N7—C8—C9 | 122.88 (13) | C4—C20—H20F | 109.5 |
| N7—C8—C19 | 114.02 (13) | H20A—C20—H20F | 56.3 |
| C9—C8—C19 | 123.05 (13) | H20B—C20—H20F | 56.3 |
| C15—C16—C17 | 118.83 (15) | H20C—C20—H20F | 141.1 |
| C15—C16—C27 | 121.87 (15) | H20D—C20—H20F | 109.5 |
| C17—C16—C27 | 119.31 (14) | H20E—C20—H20F | 109.5 |
| C5—C4—C3 | 118.82 (15) | C16—C27—H27A | 109.5 |
| C5—C4—C20 | 120.96 (16) | C16—C27—H27B | 109.5 |
| C3—C4—C20 | 120.20 (15) | H27A—C27—H27B | 109.5 |
| C21—C26—C25 | 121.90 (16) | C16—C27—H27C | 109.5 |
| C21—C26—Cl1 | 119.98 (12) | H27A—C27—H27C | 109.5 |
| C25—C26—Cl1 | 118.11 (14) | H27B—C27—H27C | 109.5 |
| C18—C17—C16 | 121.65 (14) | ||
| C10—C9—C14—C13 | 6.1 (2) | C13—C14—C21—C22 | 82.85 (19) |
| C8—C9—C14—C13 | −173.70 (13) | C14—C13—C15—C16 | −178.02 (15) |
| C10—C9—C14—C21 | −172.70 (13) | C12—C13—C15—C16 | 1.9 (2) |
| C8—C9—C14—C21 | 7.5 (2) | N7—C1—C2—C3 | 179.93 (16) |
| C12—N11—C10—C9 | 0.4 (2) | C6—C1—C2—C3 | 0.6 (3) |
| C12—N11—C10—C6 | −177.97 (13) | N11—C12—C18—C17 | −178.30 (15) |
| C14—C9—C10—N11 | −5.4 (2) | C13—C12—C18—C17 | 0.6 (2) |
| C8—C9—C10—N11 | 174.47 (13) | C1—N7—C8—C9 | 1.4 (2) |
| C14—C9—C10—C6 | 172.95 (13) | C1—N7—C8—C19 | 178.83 (14) |
| C8—C9—C10—C6 | −7.2 (2) | C14—C9—C8—N7 | −175.27 (14) |
| C9—C14—C13—C12 | −2.4 (2) | C10—C9—C8—N7 | 4.9 (2) |
| C21—C14—C13—C12 | 176.51 (13) | C14—C9—C8—C19 | 7.5 (2) |
| C9—C14—C13—C15 | 177.54 (14) | C10—C9—C8—C19 | −172.28 (14) |
| C21—C14—C13—C15 | −3.6 (2) | C13—C15—C16—C17 | −1.1 (2) |
| N11—C10—C6—C1 | −177.95 (13) | C13—C15—C16—C27 | 178.85 (16) |
| C9—C10—C6—C1 | 3.6 (2) | C6—C5—C4—C3 | 0.6 (3) |
| N11—C10—C6—C5 | 4.1 (2) | C6—C5—C4—C20 | −177.91 (16) |
| C9—C10—C6—C5 | −174.35 (14) | C22—C21—C26—C25 | 0.3 (2) |
| C5—C6—C1—N7 | −179.11 (14) | C14—C21—C26—C25 | 178.09 (15) |
| C10—C6—C1—N7 | 2.8 (2) | C22—C21—C26—Cl1 | 179.19 (13) |
| C5—C6—C1—C2 | 0.1 (2) | C14—C21—C26—Cl1 | −3.0 (2) |
| C10—C6—C1—C2 | −177.91 (14) | C12—C18—C17—C16 | 0.2 (3) |
| C10—N11—C12—C18 | −177.28 (14) | C15—C16—C17—C18 | 0.0 (3) |
| C10—N11—C12—C13 | 3.8 (2) | C27—C16—C17—C18 | −179.91 (17) |
| C14—C13—C12—N11 | −2.8 (2) | C26—C21—C22—C23 | −1.4 (3) |
| C15—C13—C12—N11 | 177.25 (14) | C14—C21—C22—C23 | −179.24 (16) |
| C14—C13—C12—C18 | 178.29 (14) | C1—C2—C3—C4 | −0.8 (3) |
| C15—C13—C12—C18 | −1.6 (2) | C5—C4—C3—C2 | 0.2 (3) |
| C6—C1—N7—C8 | −5.5 (2) | C20—C4—C3—C2 | 178.72 (18) |
| C2—C1—N7—C8 | 175.23 (15) | C21—C22—C23—C24 | 1.7 (3) |
| C1—C6—C5—C4 | −0.8 (2) | C21—C26—C25—C24 | 0.6 (3) |
| C10—C6—C5—C4 | 177.17 (14) | Cl1—C26—C25—C24 | −178.38 (14) |
| C9—C14—C21—C26 | 83.9 (2) | C22—C23—C24—C25 | −0.9 (3) |
| C13—C14—C21—C26 | −94.89 (17) | C26—C25—C24—C23 | −0.3 (3) |
| C9—C14—C21—C22 | −98.31 (19) |
| H··· | ||||
| C22—H22···N7i | 0.93 | 2.42 | 3.318 (2) | 162 |
| Cg(I) | Cg(J) | Centroid-to-Centroid |
| Cg(2) | Cg(3i) | 3.8531 (1) |
| Cg(3) | Cg(2ii) | 3.8531 (1) |
| Cg(3) | Cg(4ii) | 3.7631 (1) |
| Cg(4) | Cg(3i) | 3.7631 (1) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C22—H22⋯N7i | 0.93 | 2.42 | 3.318 (2) | 162 |
Symmetry code: (i) .