| Literature DB >> 21588630 |
Stefan Merkel1, Robert Köppen, Matthias Koch, Franziska Emmerling, Irene Nehls.
Abstract
The absolute configuration of ergometrinine, C(19)H(23)N(3)O(2) {systematic name: (6aR,9S)-N-[(S)-1-hy-droxy-propan-2-yl]-7-methyl-4,6,6a,7,8,9-hexa-hydro-indolo[4,3-fg]quinoline-9-carb-ox-amide}, was established based on epimerization reaction of ergometrine, which was followed by preparative HPLC. The non-aromatic ring (ring C of the ergoline skeleton) directly fused to the aromatic rings is nearly planar [maximum deviation = 0.271 (3) Å] and shows an envelope conformation, whereas ring D, involved in an intra-molecular N-H⋯N hydrogen bond, exibits a slightly distorted chair conformation. The structure displays undulating layers in the ac plane formed by O-H⋯O and N-H⋯O hydrogen bonds.Entities:
Year: 2010 PMID: 21588630 PMCID: PMC3008012 DOI: 10.1107/S1600536810030825
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H23N3O2 | |
| Orthorhombic, | Cu |
| Hall symbol: P 2ac 2ab | Cell parameters from 25 reflections |
| θ = 15–23° | |
| µ = 0.66 mm−1 | |
| Needle, yellow | |
| 0.20 × 0.05 × 0.02 mm |
| Enraf–Nonius CAD-4 diffractometer | 1269 reflections with |
| Radiation source: rotating anode | |
| graphite | θmax = 70.0°, θmin = 4.2° |
| ω/2θ scans | |
| Absorption correction: ψ scan (CORINC; Dräger & Gattow, 1971) | |
| 4023 measured reflections | 3 standard reflections every 60 min |
| 1889 independent reflections | intensity decay: 2% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1889 reflections | (Δ/σ)max < 0.001 |
| 219 parameters | Δρmax = 0.14 e Å−3 |
| 0 restraints | Δρmin = −0.16 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.2918 (3) | −0.17372 (18) | 0.36716 (13) | 0.0586 (7) | |
| O2 | 0.7137 (5) | −0.32052 (18) | 0.48938 (13) | 0.0815 (10) | |
| H2O | 0.7329 | −0.3191 | 0.5439 | 0.122* | |
| N1 | 0.5819 (4) | −0.1255 (2) | 0.35374 (16) | 0.0550 (8) | |
| H1N | 0.6603 | −0.0793 | 0.3259 | 0.066* | |
| N2 | 0.6383 (4) | 0.06231 (19) | 0.26795 (14) | 0.0519 (8) | |
| N3 | 0.7306 (5) | 0.4652 (2) | 0.43312 (17) | 0.0666 (9) | |
| H3N | 0.7302 | 0.5372 | 0.4476 | 0.080* | |
| C1 | 0.4047 (6) | −0.1103 (2) | 0.34594 (17) | 0.0464 (9) | |
| C2 | 0.6592 (5) | −0.2226 (3) | 0.38200 (17) | 0.0520 (9) | |
| H2 | 0.5736 | −0.2793 | 0.3715 | 0.062* | |
| C3 | 0.6825 (6) | −0.2176 (2) | 0.46383 (19) | 0.0602 (11) | |
| H2A | 0.7839 | −0.1727 | 0.4761 | 0.072* | |
| H2B | 0.5749 | −0.1889 | 0.4864 | 0.072* | |
| C4 | 0.8315 (6) | −0.2470 (4) | 0.3419 (2) | 0.0890 (15) | |
| H4A | 0.8070 | −0.2530 | 0.2904 | 0.133* | |
| H4B | 0.8802 | −0.3121 | 0.3596 | 0.133* | |
| H4C | 0.9170 | −0.1916 | 0.3500 | 0.133* | |
| C5 | 0.3492 (5) | −0.0110 (2) | 0.30590 (17) | 0.0493 (9) | |
| H5 | 0.2276 | −0.0228 | 0.2865 | 0.059* | |
| C6 | 0.4692 (6) | 0.0159 (3) | 0.24169 (19) | 0.0584 (11) | |
| H6A | 0.4950 | −0.0471 | 0.2137 | 0.070* | |
| H6B | 0.4077 | 0.0653 | 0.2098 | 0.070* | |
| C7 | 0.6047 (5) | 0.1676 (2) | 0.29911 (16) | 0.0440 (8) | |
| H7 | 0.5654 | 0.2129 | 0.2588 | 0.053* | |
| C8 | 0.7810 (5) | 0.2148 (3) | 0.32985 (19) | 0.0527 (9) | |
| H8A | 0.8389 | 0.1644 | 0.3620 | 0.063* | |
| H8B | 0.8631 | 0.2303 | 0.2899 | 0.063* | |
| C9 | 0.7408 (5) | 0.3130 (2) | 0.37121 (18) | 0.0491 (9) | |
| C10 | 0.8341 (6) | 0.4010 (3) | 0.3898 (2) | 0.0622 (10) | |
| H10 | 0.9516 | 0.4157 | 0.3752 | 0.075* | |
| C11 | 0.5652 (6) | 0.4189 (3) | 0.44279 (19) | 0.0543 (10) | |
| C12 | 0.5701 (5) | 0.3240 (2) | 0.40378 (16) | 0.0435 (8) | |
| C13 | 0.4242 (5) | 0.2560 (2) | 0.40020 (16) | 0.0436 (8) | |
| C14 | 0.4491 (5) | 0.1623 (2) | 0.35402 (16) | 0.0417 (8) | |
| C15 | 0.3382 (5) | 0.0807 (2) | 0.35753 (18) | 0.0459 (8) | |
| H15 | 0.2495 | 0.0802 | 0.3936 | 0.055* | |
| C16 | 0.2697 (5) | 0.2850 (3) | 0.43839 (18) | 0.0545 (9) | |
| H16 | 0.1681 | 0.2421 | 0.4373 | 0.065* | |
| C17 | 0.2672 (7) | 0.3792 (3) | 0.4786 (2) | 0.0685 (12) | |
| H17 | 0.1631 | 0.3962 | 0.5045 | 0.082* | |
| C18 | 0.4104 (7) | 0.4473 (3) | 0.4817 (2) | 0.0656 (11) | |
| H18 | 0.4047 | 0.5094 | 0.5083 | 0.079* | |
| C19 | 0.7721 (7) | 0.0655 (3) | 0.2083 (2) | 0.0793 (14) | |
| H19A | 0.7780 | −0.0020 | 0.1850 | 0.119* | |
| H19B | 0.8884 | 0.0830 | 0.2279 | 0.119* | |
| H19C | 0.7371 | 0.1175 | 0.1730 | 0.119* |
| O1 | 0.0606 (17) | 0.0495 (13) | 0.0658 (15) | −0.0125 (13) | 0.0060 (14) | 0.0047 (12) |
| O2 | 0.129 (3) | 0.0458 (13) | 0.0695 (17) | 0.0021 (17) | −0.0340 (18) | 0.0006 (12) |
| N1 | 0.048 (2) | 0.0480 (16) | 0.0684 (19) | −0.0048 (15) | −0.0015 (17) | 0.0171 (14) |
| N2 | 0.067 (2) | 0.0411 (14) | 0.0477 (15) | 0.0007 (15) | 0.0157 (16) | −0.0004 (12) |
| N3 | 0.090 (3) | 0.0410 (15) | 0.0693 (19) | −0.0083 (18) | −0.017 (2) | −0.0049 (15) |
| C1 | 0.054 (3) | 0.0427 (17) | 0.0426 (17) | −0.0070 (19) | 0.0016 (18) | −0.0021 (14) |
| C2 | 0.054 (2) | 0.0444 (18) | 0.058 (2) | −0.0008 (18) | −0.0048 (19) | 0.0014 (16) |
| C3 | 0.071 (3) | 0.0408 (18) | 0.069 (2) | −0.0040 (19) | −0.017 (2) | 0.0001 (16) |
| C4 | 0.069 (3) | 0.094 (3) | 0.104 (4) | 0.013 (3) | 0.018 (3) | 0.011 (3) |
| C5 | 0.051 (2) | 0.0449 (17) | 0.0523 (19) | −0.0076 (18) | −0.0095 (18) | 0.0020 (15) |
| C6 | 0.084 (3) | 0.0473 (19) | 0.0442 (18) | 0.000 (2) | −0.005 (2) | −0.0034 (16) |
| C7 | 0.050 (2) | 0.0414 (15) | 0.0408 (16) | 0.0026 (17) | 0.0039 (17) | 0.0042 (14) |
| C8 | 0.046 (2) | 0.0538 (19) | 0.058 (2) | −0.0014 (18) | 0.0112 (18) | 0.0019 (16) |
| C9 | 0.051 (2) | 0.0431 (18) | 0.0531 (19) | −0.0019 (17) | −0.0028 (19) | 0.0044 (15) |
| C10 | 0.059 (3) | 0.054 (2) | 0.074 (2) | −0.007 (2) | −0.008 (2) | 0.0077 (19) |
| C11 | 0.072 (3) | 0.0394 (17) | 0.0520 (19) | 0.0029 (19) | −0.010 (2) | 0.0001 (16) |
| C12 | 0.052 (2) | 0.0381 (16) | 0.0408 (17) | 0.0039 (18) | −0.0029 (17) | 0.0020 (14) |
| C13 | 0.049 (2) | 0.0412 (16) | 0.0409 (16) | 0.0084 (18) | 0.0016 (17) | 0.0048 (13) |
| C14 | 0.048 (2) | 0.0368 (15) | 0.0406 (16) | 0.0042 (16) | −0.0001 (16) | 0.0035 (13) |
| C15 | 0.046 (2) | 0.0443 (16) | 0.0476 (17) | 0.0042 (17) | 0.0016 (17) | 0.0024 (14) |
| C16 | 0.058 (3) | 0.0512 (18) | 0.0541 (19) | 0.0053 (19) | 0.010 (2) | 0.0019 (17) |
| C17 | 0.087 (3) | 0.060 (2) | 0.059 (2) | 0.021 (3) | 0.018 (2) | −0.0003 (19) |
| C18 | 0.098 (3) | 0.0418 (18) | 0.057 (2) | 0.018 (2) | 0.004 (2) | −0.0066 (16) |
| C19 | 0.104 (4) | 0.061 (2) | 0.073 (2) | 0.004 (3) | 0.042 (3) | −0.0040 (19) |
| O1—C1 | 1.226 (4) | C6—H6B | 0.9700 |
| O2—C3 | 1.410 (4) | C7—C14 | 1.530 (4) |
| O2—H2O | 1.0068 | C7—C8 | 1.544 (5) |
| N1—C1 | 1.334 (5) | C7—H7 | 0.9800 |
| N1—C2 | 1.457 (4) | C8—C9 | 1.490 (5) |
| N1—H1N | 0.9707 | C8—H8A | 0.9700 |
| N2—C6 | 1.466 (5) | C8—H8B | 0.9700 |
| N2—C19 | 1.474 (5) | C9—C10 | 1.360 (5) |
| N2—C7 | 1.477 (4) | C9—C12 | 1.405 (5) |
| N3—C11 | 1.371 (5) | C10—H10 | 0.9300 |
| N3—C10 | 1.372 (5) | C11—C18 | 1.397 (6) |
| N3—H3N | 0.9537 | C11—C12 | 1.403 (4) |
| C1—C5 | 1.517 (4) | C12—C13 | 1.386 (5) |
| C2—C4 | 1.505 (5) | C13—C16 | 1.391 (5) |
| C2—C3 | 1.506 (5) | C13—C14 | 1.473 (4) |
| C2—H2 | 0.9800 | C14—C15 | 1.325 (4) |
| C3—H2A | 0.9700 | C15—H15 | 0.9300 |
| C3—H2B | 0.9700 | C16—C17 | 1.407 (5) |
| C4—H4A | 0.9600 | C16—H16 | 0.9300 |
| C4—H4B | 0.9600 | C17—C18 | 1.371 (6) |
| C4—H4C | 0.9600 | C17—H17 | 0.9300 |
| C5—C15 | 1.503 (4) | C18—H18 | 0.9300 |
| C5—C6 | 1.511 (5) | C19—H19A | 0.9600 |
| C5—H5 | 0.9800 | C19—H19B | 0.9600 |
| C6—H6A | 0.9700 | C19—H19C | 0.9600 |
| C3—O2—H2O | 109.5 | N2—C7—H7 | 107.2 |
| C1—N1—C2 | 123.2 (3) | C14—C7—H7 | 107.2 |
| C1—N1—H1N | 116.4 | C8—C7—H7 | 107.2 |
| C2—N1—H1N | 117.7 | C9—C8—C7 | 110.0 (3) |
| C6—N2—C19 | 110.1 (3) | C9—C8—H8A | 109.7 |
| C6—N2—C7 | 110.3 (3) | C7—C8—H8A | 109.7 |
| C19—N2—C7 | 111.9 (3) | C9—C8—H8B | 109.7 |
| C11—N3—C10 | 108.5 (3) | C7—C8—H8B | 109.7 |
| C11—N3—H3N | 112.1 | H8A—C8—H8B | 108.2 |
| C10—N3—H3N | 137.2 | C10—C9—C12 | 105.6 (3) |
| O1—C1—N1 | 122.8 (3) | C10—C9—C8 | 135.7 (4) |
| O1—C1—C5 | 121.1 (3) | C12—C9—C8 | 118.6 (3) |
| N1—C1—C5 | 116.1 (3) | C9—C10—N3 | 110.5 (4) |
| N1—C2—C4 | 109.6 (3) | C9—C10—H10 | 124.7 |
| N1—C2—C3 | 111.1 (3) | N3—C10—H10 | 124.7 |
| C4—C2—C3 | 113.3 (4) | N3—C11—C18 | 133.5 (3) |
| N1—C2—H2 | 107.5 | N3—C11—C12 | 106.4 (3) |
| C4—C2—H2 | 107.5 | C18—C11—C12 | 120.1 (4) |
| C3—C2—H2 | 107.5 | C13—C12—C11 | 122.8 (3) |
| O2—C3—C2 | 107.9 (3) | C13—C12—C9 | 128.3 (3) |
| O2—C3—H2A | 110.1 | C11—C12—C9 | 108.9 (3) |
| C2—C3—H2A | 110.1 | C12—C13—C16 | 116.9 (3) |
| O2—C3—H2B | 110.1 | C12—C13—C14 | 115.8 (3) |
| C2—C3—H2B | 110.1 | C16—C13—C14 | 127.2 (3) |
| H2A—C3—H2B | 108.4 | C15—C14—C13 | 122.0 (3) |
| C2—C4—H4A | 109.5 | C15—C14—C7 | 122.3 (3) |
| C2—C4—H4B | 109.5 | C13—C14—C7 | 115.7 (3) |
| H4A—C4—H4B | 109.5 | C14—C15—C5 | 123.0 (3) |
| C2—C4—H4C | 109.5 | C14—C15—H15 | 118.5 |
| H4A—C4—H4C | 109.5 | C5—C15—H15 | 118.5 |
| H4B—C4—H4C | 109.5 | C13—C16—C17 | 119.9 (4) |
| C15—C5—C6 | 110.0 (3) | C13—C16—H16 | 120.0 |
| C15—C5—C1 | 111.1 (2) | C17—C16—H16 | 120.0 |
| C6—C5—C1 | 113.8 (3) | C18—C17—C16 | 123.4 (4) |
| C15—C5—H5 | 107.2 | C18—C17—H17 | 118.3 |
| C6—C5—H5 | 107.2 | C16—C17—H17 | 118.3 |
| C1—C5—H5 | 107.2 | C17—C18—C11 | 116.8 (3) |
| N2—C6—C5 | 109.9 (3) | C17—C18—H18 | 121.6 |
| N2—C6—H6A | 109.7 | C11—C18—H18 | 121.6 |
| C5—C6—H6A | 109.7 | N2—C19—H19A | 109.5 |
| N2—C6—H6B | 109.7 | N2—C19—H19B | 109.5 |
| C5—C6—H6B | 109.7 | H19A—C19—H19B | 109.5 |
| H6A—C6—H6B | 108.2 | N2—C19—H19C | 109.5 |
| N2—C7—C14 | 109.8 (2) | H19A—C19—H19C | 109.5 |
| N2—C7—C8 | 110.5 (3) | H19B—C19—H19C | 109.5 |
| C14—C7—C8 | 114.6 (2) | ||
| C2—N1—C1—O1 | 5.7 (5) | N3—C11—C12—C9 | 0.7 (4) |
| C2—N1—C1—C5 | −171.7 (3) | C18—C11—C12—C9 | −178.6 (3) |
| C1—N1—C2—C4 | 142.9 (4) | C10—C9—C12—C13 | 178.9 (3) |
| C1—N1—C2—C3 | −91.1 (4) | C8—C9—C12—C13 | −3.3 (5) |
| N1—C2—C3—O2 | 165.5 (3) | C10—C9—C12—C11 | −1.0 (4) |
| C4—C2—C3—O2 | −70.6 (4) | C8—C9—C12—C11 | 176.9 (3) |
| O1—C1—C5—C15 | 96.5 (4) | C11—C12—C13—C16 | −0.9 (5) |
| N1—C1—C5—C15 | −86.0 (4) | C9—C12—C13—C16 | 179.3 (3) |
| O1—C1—C5—C6 | −138.6 (3) | C11—C12—C13—C14 | 177.2 (3) |
| N1—C1—C5—C6 | 38.8 (4) | C9—C12—C13—C14 | −2.6 (5) |
| C19—N2—C6—C5 | 166.6 (3) | C12—C13—C14—C15 | 165.5 (3) |
| C7—N2—C6—C5 | −69.4 (3) | C16—C13—C14—C15 | −16.6 (5) |
| C15—C5—C6—N2 | 48.3 (4) | C12—C13—C14—C7 | −17.5 (4) |
| C1—C5—C6—N2 | −77.1 (3) | C16—C13—C14—C7 | 160.3 (3) |
| C6—N2—C7—C14 | 50.1 (3) | N2—C7—C14—C15 | −14.9 (4) |
| C19—N2—C7—C14 | 173.1 (3) | C8—C7—C14—C15 | −140.1 (3) |
| C6—N2—C7—C8 | 177.6 (3) | N2—C7—C14—C13 | 168.2 (3) |
| C19—N2—C7—C8 | −59.4 (4) | C8—C7—C14—C13 | 43.0 (4) |
| N2—C7—C8—C9 | −171.3 (2) | C13—C14—C15—C5 | 173.7 (3) |
| C14—C7—C8—C9 | −46.5 (4) | C7—C14—C15—C5 | −3.1 (5) |
| C7—C8—C9—C10 | −155.5 (4) | C6—C5—C15—C14 | −13.5 (5) |
| C7—C8—C9—C12 | 27.4 (4) | C1—C5—C15—C14 | 113.5 (4) |
| C12—C9—C10—N3 | 0.9 (4) | C12—C13—C16—C17 | −0.5 (5) |
| C8—C9—C10—N3 | −176.4 (4) | C14—C13—C16—C17 | −178.3 (3) |
| C11—N3—C10—C9 | −0.5 (4) | C13—C16—C17—C18 | 1.2 (5) |
| C10—N3—C11—C18 | 179.1 (4) | C16—C17—C18—C11 | −0.6 (6) |
| C10—N3—C11—C12 | −0.2 (4) | N3—C11—C18—C17 | −179.9 (4) |
| N3—C11—C12—C13 | −179.1 (3) | C12—C11—C18—C17 | −0.7 (5) |
| C18—C11—C12—C13 | 1.5 (5) |
| H··· | ||||
| N1—H1N···N2 | 0.97 | 2.10 | 2.890 (4) | 138. |
| O2—H2O···O1i | 1.01 | 1.68 | 2.684 (3) | 172. |
| N3—H3N···O2ii | 0.95 | 1.97 | 2.918 (4) | 173. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.97 | 2.10 | 2.890 (4) | 138 |
| O2—H2 | 1.01 | 1.68 | 2.684 (3) | 172 |
| N3—H3 | 0.95 | 1.97 | 2.918 (4) | 173 |
Symmetry codes: (i) ; (ii) .