| Literature DB >> 21588587 |
Dongmei Li1, Zhongzhen Tian, Gaolei Wang, Peifeng Wei, Yanming Zhang.
Abstract
In the title compound, C(8)H(15)N(3)O(4), theEntities:
Year: 2010 PMID: 21588587 PMCID: PMC3008036 DOI: 10.1107/S1600536810030266
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H15N3O4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3493 reflections |
| θ = 2.9–27.3° | |
| µ = 0.11 mm−1 | |
| β = 99.953 (14)° | Prism, colourless |
| 0.32 × 0.26 × 0.15 mm | |
| Bruker APEXII CCD diffractometer | 2330 independent reflections |
| Radiation source: fine-focus sealed tube | 1849 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.6°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 8629 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2330 reflections | Δρmax = 0.25 e Å−3 |
| 139 parameters | Δρmin = −0.16 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.014 (2) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.00359 (12) | 0.08330 (19) | 0.63950 (8) | 0.0427 (3) | |
| H1A | 0.0562 | 0.0860 | 0.5937 | 0.051* | |
| C2 | 0.06233 (12) | 0.08637 (17) | 0.73529 (8) | 0.0406 (3) | |
| C3 | 0.09094 (16) | 0.0794 (2) | 0.89827 (9) | 0.0563 (4) | |
| H3A | 0.0816 | −0.0387 | 0.9333 | 0.068* | |
| H3B | 0.0774 | 0.1913 | 0.9364 | 0.068* | |
| C4 | 0.22254 (15) | 0.0880 (2) | 0.86762 (9) | 0.0597 (4) | |
| H4A | 0.2701 | 0.2036 | 0.8921 | 0.072* | |
| H4B | 0.2741 | −0.0262 | 0.8888 | 0.072* | |
| C5 | 0.29097 (12) | 0.08628 (19) | 0.70666 (9) | 0.0461 (3) | |
| H5A | 0.2533 | 0.0386 | 0.6447 | 0.055* | |
| H5B | 0.3573 | −0.0057 | 0.7342 | 0.055* | |
| C6 | 0.35394 (11) | 0.28135 (19) | 0.69663 (8) | 0.0414 (3) | |
| H6 | 0.3643 | 0.3483 | 0.7574 | 0.050* | |
| C7 | 0.31179 (18) | 0.5845 (2) | 0.62367 (12) | 0.0641 (4) | |
| H7A | 0.3323 | 0.6410 | 0.6853 | 0.096* | |
| H7B | 0.2446 | 0.6594 | 0.5860 | 0.096* | |
| H7C | 0.3880 | 0.5846 | 0.5948 | 0.096* | |
| C8 | 0.48007 (15) | 0.1666 (3) | 0.58408 (11) | 0.0699 (5) | |
| H8A | 0.4495 | 0.0354 | 0.5873 | 0.105* | |
| H8B | 0.5676 | 0.1650 | 0.5719 | 0.105* | |
| H8C | 0.4252 | 0.2349 | 0.5343 | 0.105* | |
| N1 | −0.12619 (11) | 0.07657 (17) | 0.61267 (8) | 0.0481 (3) | |
| N2 | 0.00157 (12) | 0.0812 (2) | 0.80881 (8) | 0.0569 (3) | |
| H2 | −0.0816 | 0.0792 | 0.8041 | 0.068* | |
| N3 | 0.19059 (11) | 0.09392 (17) | 0.76437 (7) | 0.0473 (3) | |
| O1 | −0.17315 (10) | 0.07294 (17) | 0.52580 (7) | 0.0654 (3) | |
| O2 | −0.20198 (10) | 0.0741 (2) | 0.67215 (8) | 0.0725 (4) | |
| O3 | 0.26831 (8) | 0.39078 (13) | 0.63099 (6) | 0.0476 (3) | |
| O4 | 0.47709 (8) | 0.26264 (15) | 0.67127 (6) | 0.0524 (3) |
| C1 | 0.0413 (6) | 0.0489 (7) | 0.0367 (6) | −0.0019 (5) | 0.0030 (5) | 0.0045 (5) |
| C2 | 0.0448 (6) | 0.0371 (6) | 0.0384 (6) | −0.0040 (5) | 0.0029 (5) | 0.0046 (5) |
| C3 | 0.0749 (10) | 0.0563 (9) | 0.0359 (6) | −0.0084 (7) | 0.0049 (6) | 0.0040 (6) |
| C4 | 0.0647 (9) | 0.0703 (10) | 0.0380 (7) | −0.0080 (7) | −0.0082 (6) | 0.0071 (6) |
| C5 | 0.0418 (6) | 0.0450 (7) | 0.0487 (7) | −0.0006 (5) | 0.0001 (5) | −0.0001 (5) |
| C6 | 0.0349 (6) | 0.0491 (7) | 0.0379 (6) | −0.0021 (5) | −0.0001 (4) | −0.0028 (5) |
| C7 | 0.0774 (11) | 0.0510 (9) | 0.0627 (9) | −0.0060 (7) | 0.0084 (8) | 0.0084 (7) |
| C8 | 0.0467 (8) | 0.1033 (13) | 0.0602 (9) | 0.0017 (8) | 0.0108 (7) | −0.0211 (9) |
| N1 | 0.0461 (6) | 0.0522 (7) | 0.0437 (6) | −0.0003 (5) | 0.0008 (5) | 0.0042 (5) |
| N2 | 0.0519 (6) | 0.0807 (9) | 0.0379 (6) | −0.0050 (6) | 0.0073 (5) | 0.0037 (6) |
| N3 | 0.0450 (6) | 0.0570 (7) | 0.0368 (5) | −0.0083 (5) | −0.0013 (4) | 0.0060 (5) |
| O1 | 0.0562 (6) | 0.0879 (8) | 0.0445 (5) | 0.0038 (5) | −0.0124 (4) | 0.0015 (5) |
| O2 | 0.0446 (6) | 0.1143 (11) | 0.0590 (6) | −0.0025 (6) | 0.0096 (5) | 0.0061 (6) |
| O3 | 0.0438 (5) | 0.0477 (5) | 0.0479 (5) | −0.0010 (4) | −0.0014 (4) | 0.0026 (4) |
| O4 | 0.0342 (5) | 0.0713 (7) | 0.0495 (5) | −0.0050 (4) | 0.0010 (4) | −0.0086 (5) |
| C1—N1 | 1.3447 (17) | C5—H5B | 0.9700 |
| C1—C2 | 1.4131 (17) | C6—O4 | 1.4028 (15) |
| C1—H1A | 0.9300 | C6—O3 | 1.4036 (15) |
| C2—N2 | 1.3282 (17) | C6—H6 | 0.9800 |
| C2—N3 | 1.3339 (16) | C7—O3 | 1.4159 (18) |
| C3—N2 | 1.4573 (17) | C7—H7A | 0.9600 |
| C3—C4 | 1.516 (2) | C7—H7B | 0.9600 |
| C3—H3A | 0.9700 | C7—H7C | 0.9600 |
| C3—H3B | 0.9700 | C8—O4 | 1.4265 (18) |
| C4—N3 | 1.4711 (17) | C8—H8A | 0.9600 |
| C4—H4A | 0.9700 | C8—H8B | 0.9600 |
| C4—H4B | 0.9700 | C8—H8C | 0.9600 |
| C5—N3 | 1.4485 (18) | N1—O2 | 1.2647 (15) |
| C5—C6 | 1.5104 (18) | N1—O1 | 1.2658 (14) |
| C5—H5A | 0.9700 | N2—H2 | 0.8600 |
| N1—C1—C2 | 121.87 (12) | O4—C6—H6 | 108.2 |
| N1—C1—H1A | 119.1 | O3—C6—H6 | 108.2 |
| C2—C1—H1A | 119.1 | C5—C6—H6 | 108.2 |
| N2—C2—N3 | 110.00 (11) | O3—C7—H7A | 109.5 |
| N2—C2—C1 | 126.55 (12) | O3—C7—H7B | 109.5 |
| N3—C2—C1 | 123.45 (12) | H7A—C7—H7B | 109.5 |
| N2—C3—C4 | 102.41 (11) | O3—C7—H7C | 109.5 |
| N2—C3—H3A | 111.3 | H7A—C7—H7C | 109.5 |
| C4—C3—H3A | 111.3 | H7B—C7—H7C | 109.5 |
| N2—C3—H3B | 111.3 | O4—C8—H8A | 109.5 |
| C4—C3—H3B | 111.3 | O4—C8—H8B | 109.5 |
| H3A—C3—H3B | 109.2 | H8A—C8—H8B | 109.5 |
| N3—C4—C3 | 103.81 (11) | O4—C8—H8C | 109.5 |
| N3—C4—H4A | 111.0 | H8A—C8—H8C | 109.5 |
| C3—C4—H4A | 111.0 | H8B—C8—H8C | 109.5 |
| N3—C4—H4B | 111.0 | O2—N1—O1 | 119.47 (11) |
| C3—C4—H4B | 111.0 | O2—N1—C1 | 121.53 (11) |
| H4A—C4—H4B | 109.0 | O1—N1—C1 | 119.00 (12) |
| N3—C5—C6 | 113.17 (11) | C2—N2—C3 | 112.80 (12) |
| N3—C5—H5A | 108.9 | C2—N2—H2 | 123.6 |
| C6—C5—H5A | 108.9 | C3—N2—H2 | 123.6 |
| N3—C5—H5B | 108.9 | C2—N3—C5 | 127.22 (11) |
| C6—C5—H5B | 108.9 | C2—N3—C4 | 110.95 (11) |
| H5A—C5—H5B | 107.8 | C5—N3—C4 | 121.47 (11) |
| O4—C6—O3 | 112.25 (10) | C6—O3—C7 | 112.24 (10) |
| O4—C6—C5 | 112.21 (11) | C6—O4—C8 | 115.70 (10) |
| O3—C6—C5 | 107.61 (9) | ||
| N1—C1—C2—N2 | 0.7 (2) | C1—C2—N3—C5 | −4.8 (2) |
| N1—C1—C2—N3 | −179.68 (12) | N2—C2—N3—C4 | 1.74 (15) |
| N2—C3—C4—N3 | 0.09 (15) | C1—C2—N3—C4 | −177.89 (12) |
| N3—C5—C6—O4 | 158.56 (10) | C6—C5—N3—C2 | 105.58 (14) |
| N3—C5—C6—O3 | −77.48 (13) | C6—C5—N3—C4 | −81.94 (15) |
| C2—C1—N1—O2 | 0.51 (19) | C3—C4—N3—C2 | −1.09 (15) |
| C2—C1—N1—O1 | −179.59 (12) | C3—C4—N3—C5 | −174.68 (12) |
| N3—C2—N2—C3 | −1.71 (16) | O4—C6—O3—C7 | −62.38 (14) |
| C1—C2—N2—C3 | 177.90 (12) | C5—C6—O3—C7 | 173.69 (12) |
| C4—C3—N2—C2 | 0.95 (16) | O3—C6—O4—C8 | −61.01 (16) |
| N2—C2—N3—C5 | 174.88 (12) | C5—C6—O4—C8 | 60.33 (16) |
| H··· | ||||
| N2—H2···O2 | 0.86 | 2.09 | 2.6394 (17) | 121 |
| N2—H2···O3i | 0.86 | 2.64 | 3.3554 (16) | 141 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O2 | 0.86 | 2.09 | 2.6394 (17) | 121 |
| N2—H2⋯O3i | 0.86 | 2.64 | 3.3554 (16) | 141 |
Symmetry code: (i) .