Literature DB >> 21588292

(E)-1-(4-Amino-phen-yl)-3-(2,4,5-trimeth-oxy-phen-yl)prop-2-en-1-one.

Hoong-Kun Fun, Thawanrat Kobkeatthawin, Pumsak Ruanwas, Suchada Chantrapromma.   

Abstract

Mol-ecules of the title amino-chalcone, C(18)H(19)NO(4), are twisted, with a dihedral angle of 11.26 (6)° between the 4-amino-phenyl and 2,4,5-trimeth-oxy-phenyl rings. The conformations of the three meth-oxy groups with respect to the benzene ring are slightly different. Two meth-oxy groups are almost coplanar with the attached benzene ring [C-O-C-C torsion angles of -1.45 (19) and 1.5 (2)°], while the third is (-)-synclinal with the attached benzene ring [C-O-C-C = -81.36 (17)°]. In the crystal structure, mol-ecules are stacked into columns along the b axis and mol-ecules in adjacent columns are linked by N-H⋯O hydrogen bonds into V-shaped double columns. Weak π-π inter-actions are also observed, with a centroid-centroid distance of 3.7532 (8) Å.

Entities:  

Year:  2010        PMID: 21588292      PMCID: PMC3007376          DOI: 10.1107/S1600536810026346

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For hydrogen bond motifs, see: Bernstein et al. (1995 ▶). For related structures, see: Chantrapromma et al. (2009 ▶, 2010 ▶); Suwunwong et al. (2009 ▶). For background to and applications of chalcones, see: Batovska et al. (2007 ▶); Jung et al. (2008 ▶); Kim et al. (2010 ▶); Nielsen et al. (2004 ▶); Niu et al. (2006 ▶); Romagnoli et al. (2008 ▶); Tewtrakul et al. (2003 ▶); Won et al. (2005 ▶); Xia et al. (2000 ▶).

Experimental

Crystal data

C18H19NO4 M = 313.34 Monoclinic, a = 13.6117 (2) Å b = 10.3540 (2) Å c = 22.3920 (4) Å β = 100.879 (1)° V = 3099.11 (9) Å3 Z = 8 Mo Kα radiation μ = 0.10 mm−1 T = 100 K 0.38 × 0.32 × 0.10 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.965, T max = 0.991 19818 measured reflections 4506 independent reflections 3581 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.131 S = 1.05 4506 reflections 219 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.43 e Å−3 Δρmin = −0.23 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810026346/fj2326sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810026346/fj2326Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H19NO4F(000) = 1328
Mr = 313.34Dx = 1.343 Mg m3
Monoclinic, C2/cMelting point = 393–394 K
Hall symbol: -C 2ycMo Kα radiation, λ = 0.71073 Å
a = 13.6117 (2) ÅCell parameters from 4506 reflections
b = 10.3540 (2) Åθ = 1.9–30.0°
c = 22.3920 (4) ŵ = 0.10 mm1
β = 100.879 (1)°T = 100 K
V = 3099.11 (9) Å3Block, orange
Z = 80.38 × 0.32 × 0.10 mm
Bruker APEXII CCD area-detector diffractometer4506 independent reflections
Radiation source: sealed tube3581 reflections with I > 2σ(I)
graphiteRint = 0.029
φ and ω scansθmax = 30.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −19→19
Tmin = 0.965, Tmax = 0.991k = −14→12
19818 measured reflectionsl = −31→31
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.131H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0552P)2 + 3.4363P] where P = (Fo2 + 2Fc2)/3
4506 reflections(Δ/σ)max < 0.001
219 parametersΔρmax = 0.43 e Å3
0 restraintsΔρmin = −0.23 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 120.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.38020 (7)0.71239 (11)0.65434 (5)0.0236 (2)
O20.40102 (7)0.40284 (10)0.49618 (5)0.0226 (2)
O30.10593 (7)0.26403 (10)0.35317 (5)0.0237 (2)
O4−0.00667 (7)0.42294 (10)0.40878 (5)0.0230 (2)
N10.09228 (9)1.16277 (13)0.71073 (6)0.0226 (3)
H1N10.0289 (15)1.1700 (18)0.6971 (8)0.028 (5)*
H2N10.1136 (15)1.197 (2)0.7468 (9)0.036 (5)*
C10.23640 (9)0.84035 (13)0.65403 (6)0.0165 (3)
C20.28745 (9)0.92608 (13)0.69789 (6)0.0169 (3)
H2A0.35520.91290.71310.020*
C30.23973 (10)1.02891 (13)0.71892 (6)0.0174 (3)
H3A0.27491.08290.74860.021*
C40.13779 (10)1.05267 (13)0.69558 (6)0.0171 (3)
C50.08494 (9)0.96364 (14)0.65447 (6)0.0183 (3)
H5A0.01660.97460.64070.022*
C60.13318 (10)0.86001 (14)0.63425 (6)0.0182 (3)
H6A0.09680.80200.60700.022*
C70.29247 (10)0.73650 (13)0.63014 (6)0.0177 (3)
C80.24234 (10)0.66396 (14)0.57644 (6)0.0201 (3)
H8A0.17620.68350.55980.024*
C90.28853 (9)0.57075 (13)0.55064 (6)0.0177 (3)
H9A0.35530.55490.56730.021*
C100.24334 (9)0.49221 (13)0.49882 (6)0.0163 (3)
C110.30112 (9)0.40495 (13)0.47178 (6)0.0174 (3)
C120.25784 (10)0.32686 (13)0.42310 (6)0.0185 (3)
H12A0.29730.26970.40590.022*
C130.15546 (10)0.33465 (13)0.40038 (6)0.0181 (3)
C140.09645 (9)0.42119 (13)0.42698 (6)0.0181 (3)
C150.14011 (10)0.49721 (13)0.47490 (6)0.0177 (3)
H15A0.10020.55380.49210.021*
C160.46300 (10)0.31421 (15)0.47127 (7)0.0227 (3)
H16A0.53100.32310.49220.034*
H16B0.45900.33240.42880.034*
H16C0.44060.22760.47600.034*
C170.16178 (11)0.17238 (15)0.32512 (7)0.0249 (3)
H17A0.11890.13380.29080.037*
H17B0.18770.10650.35400.037*
H17C0.21620.21550.31180.037*
C18−0.04143 (12)0.49413 (19)0.35457 (8)0.0338 (4)
H18A−0.11290.50170.34820.051*
H18B−0.02280.45000.32070.051*
H18C−0.01200.57870.35820.051*
U11U22U33U12U13U23
O10.0160 (5)0.0295 (6)0.0228 (5)0.0039 (4)−0.0025 (4)−0.0032 (4)
O20.0130 (4)0.0288 (6)0.0253 (5)0.0038 (4)0.0019 (4)−0.0025 (4)
O30.0197 (5)0.0270 (5)0.0244 (5)−0.0026 (4)0.0043 (4)−0.0092 (4)
O40.0132 (4)0.0286 (6)0.0263 (5)−0.0023 (4)0.0012 (4)−0.0023 (4)
N10.0168 (6)0.0277 (7)0.0220 (6)0.0043 (5)0.0001 (4)−0.0045 (5)
C10.0151 (6)0.0176 (6)0.0160 (6)−0.0007 (5)0.0009 (4)0.0023 (5)
C20.0126 (5)0.0202 (6)0.0164 (6)−0.0009 (5)−0.0009 (4)0.0036 (5)
C30.0157 (6)0.0201 (6)0.0151 (6)−0.0029 (5)−0.0004 (4)0.0012 (5)
C40.0162 (6)0.0200 (6)0.0152 (6)−0.0005 (5)0.0035 (4)0.0034 (5)
C50.0116 (5)0.0230 (7)0.0195 (6)−0.0014 (5)0.0003 (4)0.0023 (5)
C60.0151 (6)0.0206 (6)0.0176 (6)−0.0038 (5)−0.0002 (4)0.0006 (5)
C70.0160 (6)0.0194 (6)0.0170 (6)−0.0002 (5)0.0012 (5)0.0022 (5)
C80.0151 (6)0.0225 (7)0.0203 (6)0.0011 (5)−0.0024 (5)−0.0015 (5)
C90.0137 (5)0.0220 (7)0.0170 (6)−0.0018 (5)0.0019 (4)0.0029 (5)
C100.0145 (6)0.0184 (6)0.0161 (6)−0.0008 (5)0.0034 (4)0.0018 (5)
C110.0135 (5)0.0202 (6)0.0186 (6)−0.0002 (5)0.0034 (5)0.0035 (5)
C120.0178 (6)0.0186 (6)0.0209 (6)0.0013 (5)0.0080 (5)0.0005 (5)
C130.0190 (6)0.0186 (6)0.0174 (6)−0.0038 (5)0.0052 (5)−0.0006 (5)
C140.0129 (6)0.0208 (7)0.0206 (6)−0.0023 (5)0.0033 (5)0.0008 (5)
C150.0148 (6)0.0187 (6)0.0200 (6)0.0003 (5)0.0045 (5)−0.0005 (5)
C160.0166 (6)0.0260 (7)0.0265 (7)0.0058 (5)0.0071 (5)0.0040 (6)
C170.0281 (7)0.0221 (7)0.0260 (7)−0.0023 (6)0.0091 (6)−0.0064 (6)
C180.0208 (7)0.0432 (10)0.0345 (9)0.0005 (7)−0.0023 (6)0.0071 (7)
O1—C71.2400 (16)C8—C91.3407 (19)
O2—C111.3666 (15)C8—H8A0.9300
O2—C161.4293 (17)C9—C101.4549 (18)
O3—C131.3557 (16)C9—H9A0.9300
O3—C171.4329 (17)C10—C151.4071 (18)
O4—C141.3859 (15)C10—C111.4076 (18)
O4—C181.4228 (19)C11—C121.3953 (19)
N1—C41.3704 (18)C12—C131.3927 (18)
N1—H1N10.862 (19)C12—H12A0.9300
N1—H2N10.88 (2)C13—C141.4083 (19)
C1—C61.4060 (18)C14—C151.3724 (19)
C1—C21.4064 (18)C15—H15A0.9300
C1—C71.4760 (19)C16—H16A0.9600
C2—C31.3758 (19)C16—H16B0.9600
C2—H2A0.9300C16—H16C0.9600
C3—C41.4089 (18)C17—H17A0.9600
C3—H3A0.9300C17—H17B0.9600
C4—C51.4016 (19)C17—H17C0.9600
C5—C61.378 (2)C18—H18A0.9600
C5—H5A0.9300C18—H18B0.9600
C6—H6A0.9300C18—H18C0.9600
C7—C81.4718 (19)
C11—O2—C16118.06 (11)C11—C10—C9121.02 (12)
C13—O3—C17118.17 (11)O2—C11—C12123.00 (12)
C14—O4—C18114.38 (11)O2—C11—C10115.65 (12)
C4—N1—H1N1117.0 (13)C12—C11—C10121.35 (12)
C4—N1—H2N1118.4 (13)C13—C12—C11119.84 (12)
H1N1—N1—H2N1115.1 (18)C13—C12—H12A120.1
C6—C1—C2117.47 (12)C11—C12—H12A120.1
C6—C1—C7123.07 (12)O3—C13—C12124.72 (12)
C2—C1—C7119.46 (11)O3—C13—C14115.69 (12)
C3—C2—C1121.63 (12)C12—C13—C14119.59 (12)
C3—C2—H2A119.2C15—C14—O4119.17 (12)
C1—C2—H2A119.2C15—C14—C13119.88 (12)
C2—C3—C4120.24 (12)O4—C14—C13120.72 (12)
C2—C3—H3A119.9C14—C15—C10122.04 (12)
C4—C3—H3A119.9C14—C15—H15A119.0
N1—C4—C5120.65 (12)C10—C15—H15A119.0
N1—C4—C3120.86 (12)O2—C16—H16A109.5
C5—C4—C3118.44 (12)O2—C16—H16B109.5
C6—C5—C4120.69 (12)H16A—C16—H16B109.5
C6—C5—H5A119.7O2—C16—H16C109.5
C4—C5—H5A119.7H16A—C16—H16C109.5
C5—C6—C1121.26 (12)H16B—C16—H16C109.5
C5—C6—H6A119.4O3—C17—H17A109.5
C1—C6—H6A119.4O3—C17—H17B109.5
O1—C7—C8120.93 (12)H17A—C17—H17B109.5
O1—C7—C1120.63 (12)O3—C17—H17C109.5
C8—C7—C1118.43 (11)H17A—C17—H17C109.5
C9—C8—C7122.45 (12)H17B—C17—H17C109.5
C9—C8—H8A118.8O4—C18—H18A109.5
C7—C8—H8A118.8O4—C18—H18B109.5
C8—C9—C10125.73 (12)H18A—C18—H18B109.5
C8—C9—H9A117.1O4—C18—H18C109.5
C10—C9—H9A117.1H18A—C18—H18C109.5
C15—C10—C11117.31 (12)H18B—C18—H18C109.5
C15—C10—C9121.64 (12)
C6—C1—C2—C3−2.81 (19)C15—C10—C11—O2179.96 (11)
C7—C1—C2—C3176.14 (12)C9—C10—C11—O2−1.95 (18)
C1—C2—C3—C4−1.5 (2)C15—C10—C11—C120.21 (19)
C2—C3—C4—N1−172.31 (13)C9—C10—C11—C12178.30 (12)
C2—C3—C4—C55.09 (19)O2—C11—C12—C13−179.69 (12)
N1—C4—C5—C6173.09 (13)C10—C11—C12—C130.0 (2)
C3—C4—C5—C6−4.31 (19)C17—O3—C13—C121.5 (2)
C4—C5—C6—C1−0.1 (2)C17—O3—C13—C14−178.72 (12)
C2—C1—C6—C53.6 (2)C11—C12—C13—O3179.60 (13)
C7—C1—C6—C5−175.30 (13)C11—C12—C13—C14−0.2 (2)
C6—C1—C7—O1−170.62 (13)C18—O4—C14—C15104.12 (16)
C2—C1—C7—O110.5 (2)C18—O4—C14—C13−81.36 (17)
C6—C1—C7—C810.37 (19)O3—C13—C14—C15−179.72 (12)
C2—C1—C7—C8−168.52 (12)C12—C13—C14—C150.1 (2)
O1—C7—C8—C9−1.0 (2)O3—C13—C14—O45.79 (19)
C1—C7—C8—C9177.98 (13)C12—C13—C14—O4−174.38 (12)
C7—C8—C9—C10177.99 (13)O4—C14—C15—C10174.73 (12)
C8—C9—C10—C15−7.9 (2)C13—C14—C15—C100.2 (2)
C8—C9—C10—C11174.10 (14)C11—C10—C15—C14−0.3 (2)
C16—O2—C11—C12−1.45 (19)C9—C10—C15—C14−178.39 (13)
C16—O2—C11—C10178.80 (12)
D—H···AD—HH···AD···AD—H···A
N1—H1N1···O1i0.86 (2)2.12 (2)2.9692 (16)170.4 (17)
N1—H2N1···O1ii0.88 (2)2.21 (2)3.0176 (17)153.4 (19)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N1⋯O1i0.86 (2)2.12 (2)2.9692 (16)170.4 (17)
N1—H2N1⋯O1ii0.88 (2)2.21 (2)3.0176 (17)153.4 (19)

Symmetry codes: (i) ; (ii) .

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