| Literature DB >> 21579743 |
Suchada Chantrapromma, Thitipone Suwunwong, Nawong Boonnak, Hoong-Kun Fun.
Abstract
The title heteroaryl chalcone, C(21)H(14)OS, is a second ortho-rhom-bic polymorph which crystallizes in the space group P2(1)2(1)2(1). The structure was previously reported [Fun et al. (2009 ▶). Acta Cryst. E65, o2168-o2169] in the space group Pna2(1). The bond distances and angles are similar in both structures. In contrast, the overall crystal packing is different from that in the first ortho-rhom-bic Pna2(1) polymorph in which mol-ecules were stacked into columns along the b axis and the thio-phene units of two adjacent columns were stacked in a head to tail fashion. In the present polymorph, mol-ecules are found to dimerize through a weak S⋯S inter-action [3.6513 (7) Å] and these dimers are arranged into sheets parallel to the bc plane. There are no classical hydrogen bonds in the packing which features short C⋯O [3.2832 (2)-3.6251 (9) Å], C⋯S [3.4879 (17)-3.6251 (19) Å] and S⋯O [2.9948 (16) Å] contacts, together with C-H⋯π inter-actions. Similar contacts were found in the other polymorph.Entities:
Year: 2010 PMID: 21579743 PMCID: PMC2979950 DOI: 10.1107/S1600536810000061
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H14OS | |
| Melting point = 400–401 K | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 4354 reflections |
| θ = 1.8–30.0° | |
| µ = 0.22 mm−1 | |
| Block, yellow | |
| 0.50 × 0.19 × 0.11 mm | |
| Bruker APEXII CCD area-detector diffractometer | 4354 independent reflections |
| Radiation source: sealed tube | 4035 reflections with |
| graphite | |
| φ and ω scans | θmax = 30.0°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 14062 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 4354 reflections | Δρmax = 0.79 e Å−3 |
| 254 parameters | Δρmin = −0.62 e Å−3 |
| 0 restraints | Absolute structure: Flack (1983), 1830 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.04 (8) |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 120.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.79023 (9) | 0.82740 (3) | 0.98167 (3) | 0.01920 (11) | |
| O1 | 0.6379 (3) | 0.74101 (10) | 0.84157 (8) | 0.0208 (3) | |
| C1 | 0.6215 (3) | 0.62511 (12) | 0.66251 (10) | 0.0142 (3) | |
| C2 | 0.6199 (4) | 0.69201 (13) | 0.60656 (10) | 0.0176 (4) | |
| H2A | 0.747 (4) | 0.7404 (15) | 0.6071 (12) | 0.019 (6)* | |
| C3 | 0.4549 (4) | 0.68828 (13) | 0.55096 (10) | 0.0193 (4) | |
| H3A | 0.459 (4) | 0.7304 (16) | 0.5132 (14) | 0.022 (6)* | |
| C4 | 0.2761 (4) | 0.61930 (13) | 0.54827 (11) | 0.0198 (4) | |
| H4A | 0.150 (5) | 0.6169 (17) | 0.5090 (13) | 0.026 (6)* | |
| C5 | 0.2685 (4) | 0.55527 (13) | 0.60124 (10) | 0.0184 (4) | |
| H5A | 0.155 (5) | 0.5111 (18) | 0.6021 (14) | 0.033 (7)* | |
| C6 | 0.4394 (3) | 0.55565 (12) | 0.65992 (10) | 0.0146 (3) | |
| C7 | 0.4332 (4) | 0.49043 (12) | 0.71450 (10) | 0.0169 (4) | |
| H7A | 0.311 (4) | 0.4456 (14) | 0.7129 (11) | 0.010 (5)* | |
| C8 | 0.6064 (4) | 0.48855 (12) | 0.76949 (10) | 0.0159 (4) | |
| C9 | 0.6059 (4) | 0.41897 (13) | 0.82390 (11) | 0.0213 (4) | |
| H9A | 0.479 (4) | 0.3744 (16) | 0.8218 (13) | 0.019 (6)* | |
| C10 | 0.7811 (4) | 0.41528 (14) | 0.87607 (11) | 0.0240 (4) | |
| H10A | 0.788 (5) | 0.3656 (16) | 0.9099 (13) | 0.022 (6)* | |
| C11 | 0.9682 (4) | 0.48106 (15) | 0.87753 (11) | 0.0222 (4) | |
| H11A | 1.103 (5) | 0.4744 (16) | 0.9123 (13) | 0.023 (6)* | |
| C12 | 0.9731 (4) | 0.54951 (14) | 0.82813 (10) | 0.0189 (4) | |
| H12A | 1.091 (5) | 0.5966 (17) | 0.8299 (13) | 0.027 (7)* | |
| C13 | 0.7917 (4) | 0.55659 (12) | 0.77254 (9) | 0.0156 (3) | |
| C14 | 0.7917 (3) | 0.62627 (12) | 0.72009 (9) | 0.0143 (3) | |
| C15 | 0.9746 (4) | 0.69969 (13) | 0.72208 (10) | 0.0172 (4) | |
| H15A | 1.077 (4) | 0.7024 (15) | 0.6807 (12) | 0.016 (6)* | |
| C16 | 1.0028 (4) | 0.76158 (13) | 0.77411 (10) | 0.0178 (4) | |
| H16A | 1.138 (5) | 0.8035 (17) | 0.7711 (13) | 0.026 (6)* | |
| C17 | 0.8452 (3) | 0.77098 (12) | 0.83955 (10) | 0.0153 (3) | |
| C18 | 0.9491 (3) | 0.82083 (12) | 0.90132 (9) | 0.0146 (3) | |
| C19 | 1.1727 (3) | 0.86783 (12) | 0.90518 (10) | 0.0146 (2) | |
| H19A | 1.2863 | 0.8714 | 0.8678 | 0.018* | |
| C20 | 1.1971 (3) | 0.90888 (11) | 0.97520 (10) | 0.0146 (2) | |
| H20A | 1.351 (5) | 0.9445 (17) | 0.9876 (14) | 0.031 (7)* | |
| C21 | 1.0083 (4) | 0.89174 (13) | 1.02086 (11) | 0.0198 (4) | |
| H21A | 0.993 (5) | 0.9095 (18) | 1.0753 (15) | 0.034 (7)* |
| S1 | 0.0185 (2) | 0.0204 (2) | 0.0188 (2) | −0.00094 (17) | 0.00214 (18) | −0.00059 (18) |
| O1 | 0.0163 (6) | 0.0219 (7) | 0.0243 (7) | −0.0038 (6) | 0.0037 (6) | −0.0053 (6) |
| C1 | 0.0159 (8) | 0.0132 (8) | 0.0136 (8) | 0.0006 (7) | 0.0018 (6) | −0.0028 (6) |
| C2 | 0.0200 (9) | 0.0167 (8) | 0.0162 (8) | 0.0000 (7) | 0.0013 (7) | −0.0014 (7) |
| C3 | 0.0234 (9) | 0.0181 (9) | 0.0163 (8) | 0.0033 (7) | −0.0002 (7) | 0.0009 (7) |
| C4 | 0.0211 (9) | 0.0210 (9) | 0.0174 (8) | 0.0038 (8) | −0.0038 (8) | −0.0049 (7) |
| C5 | 0.0182 (9) | 0.0167 (8) | 0.0204 (8) | 0.0001 (7) | −0.0007 (8) | −0.0057 (7) |
| C6 | 0.0140 (8) | 0.0143 (8) | 0.0155 (8) | 0.0007 (7) | −0.0001 (7) | −0.0056 (7) |
| C7 | 0.0187 (9) | 0.0131 (8) | 0.0188 (8) | −0.0010 (7) | 0.0030 (7) | −0.0038 (7) |
| C8 | 0.0192 (9) | 0.0142 (8) | 0.0143 (8) | 0.0023 (7) | 0.0050 (7) | −0.0007 (7) |
| C9 | 0.0279 (11) | 0.0152 (9) | 0.0208 (9) | 0.0012 (8) | 0.0065 (8) | 0.0002 (7) |
| C10 | 0.0325 (11) | 0.0215 (9) | 0.0179 (8) | 0.0078 (9) | 0.0061 (9) | 0.0032 (7) |
| C11 | 0.0254 (10) | 0.0262 (10) | 0.0149 (8) | 0.0088 (9) | 0.0012 (8) | 0.0007 (8) |
| C12 | 0.0182 (9) | 0.0219 (9) | 0.0166 (8) | 0.0029 (8) | 0.0016 (7) | −0.0013 (7) |
| C13 | 0.0164 (8) | 0.0170 (8) | 0.0133 (7) | 0.0038 (7) | 0.0036 (7) | −0.0019 (6) |
| C14 | 0.0146 (7) | 0.0144 (8) | 0.0141 (7) | 0.0014 (7) | 0.0019 (7) | −0.0028 (6) |
| C15 | 0.0163 (8) | 0.0213 (9) | 0.0141 (8) | −0.0014 (7) | 0.0026 (7) | 0.0002 (7) |
| C16 | 0.0170 (9) | 0.0198 (9) | 0.0165 (8) | −0.0033 (7) | 0.0013 (7) | 0.0000 (7) |
| C17 | 0.0173 (9) | 0.0118 (8) | 0.0167 (8) | −0.0001 (7) | 0.0011 (7) | −0.0010 (6) |
| C18 | 0.0161 (8) | 0.0151 (8) | 0.0125 (7) | 0.0021 (7) | 0.0022 (6) | 0.0003 (7) |
| C19 | 0.0125 (5) | 0.0149 (5) | 0.0164 (6) | 0.0005 (5) | −0.0024 (5) | −0.0019 (5) |
| C20 | 0.0125 (5) | 0.0149 (5) | 0.0164 (6) | 0.0005 (5) | −0.0024 (5) | −0.0019 (5) |
| C21 | 0.0243 (9) | 0.0190 (8) | 0.0161 (8) | 0.0040 (7) | −0.0012 (8) | −0.0017 (7) |
| S1—C21 | 1.696 (2) | C9—H9A | 0.96 (3) |
| S1—C18 | 1.7184 (18) | C10—C11 | 1.421 (3) |
| O1—C17 | 1.227 (2) | C10—H10A | 0.97 (2) |
| C1—C14 | 1.414 (3) | C11—C12 | 1.363 (3) |
| C1—C2 | 1.429 (3) | C11—H11A | 0.98 (3) |
| C1—C6 | 1.440 (3) | C12—C13 | 1.433 (3) |
| C2—C3 | 1.368 (3) | C12—H12A | 0.96 (3) |
| C2—H2A | 1.00 (2) | C13—C14 | 1.414 (2) |
| C3—C4 | 1.422 (3) | C14—C15 | 1.485 (3) |
| C3—H3A | 0.93 (2) | C15—C16 | 1.335 (3) |
| C4—C5 | 1.361 (3) | C15—H15A | 0.95 (2) |
| C4—H4A | 1.00 (3) | C16—C17 | 1.489 (3) |
| C5—C6 | 1.431 (3) | C16—H16A | 0.97 (3) |
| C5—H5A | 0.91 (3) | C17—C18 | 1.470 (3) |
| C6—C7 | 1.394 (3) | C18—C19 | 1.418 (3) |
| C7—C8 | 1.390 (3) | C19—C20 | 1.429 (2) |
| C7—H7A | 0.95 (2) | C19—H19A | 0.9300 |
| C8—C9 | 1.437 (3) | C20—C21 | 1.360 (3) |
| C8—C13 | 1.438 (3) | C20—H20A | 1.02 (3) |
| C9—C10 | 1.361 (3) | C21—H21A | 1.04 (3) |
| C21—S1—C18 | 92.02 (10) | C12—C11—H11A | 119.5 (15) |
| C14—C1—C2 | 122.21 (17) | C10—C11—H11A | 119.4 (14) |
| C14—C1—C6 | 119.73 (17) | C11—C12—C13 | 121.0 (2) |
| C2—C1—C6 | 118.05 (17) | C11—C12—H12A | 122.4 (16) |
| C3—C2—C1 | 120.81 (18) | C13—C12—H12A | 116.5 (16) |
| C3—C2—H2A | 120.0 (13) | C14—C13—C12 | 122.62 (18) |
| C1—C2—H2A | 119.1 (13) | C14—C13—C8 | 119.20 (17) |
| C2—C3—C4 | 121.04 (18) | C12—C13—C8 | 118.16 (17) |
| C2—C3—H3A | 120.8 (15) | C13—C14—C1 | 120.04 (17) |
| C4—C3—H3A | 118.2 (15) | C13—C14—C15 | 121.37 (16) |
| C5—C4—C3 | 119.99 (18) | C1—C14—C15 | 118.55 (16) |
| C5—C4—H4A | 118.0 (15) | C16—C15—C14 | 127.01 (17) |
| C3—C4—H4A | 122.0 (15) | C16—C15—H15A | 118.3 (14) |
| C4—C5—C6 | 120.99 (19) | C14—C15—H15A | 114.7 (14) |
| C4—C5—H5A | 122.6 (17) | C15—C16—C17 | 125.05 (17) |
| C6—C5—H5A | 116.4 (17) | C15—C16—H16A | 119.3 (15) |
| C7—C6—C5 | 121.47 (17) | C17—C16—H16A | 115.6 (15) |
| C7—C6—C1 | 119.43 (17) | O1—C17—C18 | 121.46 (17) |
| C5—C6—C1 | 119.10 (17) | O1—C17—C16 | 122.25 (17) |
| C8—C7—C6 | 121.27 (17) | C18—C17—C16 | 116.26 (16) |
| C8—C7—H7A | 119.8 (13) | C19—C18—C17 | 128.65 (16) |
| C6—C7—H7A | 118.9 (13) | C19—C18—S1 | 111.83 (13) |
| C7—C8—C9 | 121.21 (18) | C17—C18—S1 | 119.51 (14) |
| C7—C8—C13 | 120.14 (17) | C18—C19—C20 | 109.67 (16) |
| C9—C8—C13 | 118.65 (18) | C18—C19—H19A | 125.2 |
| C10—C9—C8 | 121.1 (2) | C20—C19—H19A | 125.2 |
| C10—C9—H9A | 121.0 (14) | C21—C20—C19 | 113.75 (16) |
| C8—C9—H9A | 117.8 (14) | C21—C20—H20A | 126.4 (15) |
| C9—C10—C11 | 120.04 (18) | C19—C20—H20A | 119.8 (15) |
| C9—C10—H10A | 120.8 (16) | C20—C21—S1 | 112.71 (15) |
| C11—C10—H10A | 119.0 (16) | C20—C21—H21A | 127.5 (16) |
| C12—C11—C10 | 121.0 (2) | S1—C21—H21A | 119.7 (16) |
| C14—C1—C2—C3 | 179.06 (17) | C9—C8—C13—C12 | 2.5 (3) |
| C6—C1—C2—C3 | −2.1 (3) | C12—C13—C14—C1 | 174.11 (17) |
| C1—C2—C3—C4 | 1.7 (3) | C8—C13—C14—C1 | −4.4 (3) |
| C2—C3—C4—C5 | −0.5 (3) | C12—C13—C14—C15 | −3.3 (3) |
| C3—C4—C5—C6 | −0.4 (3) | C8—C13—C14—C15 | 178.18 (16) |
| C4—C5—C6—C7 | 179.95 (18) | C2—C1—C14—C13 | −177.53 (17) |
| C4—C5—C6—C1 | 0.0 (3) | C6—C1—C14—C13 | 3.6 (3) |
| C14—C1—C6—C7 | 0.2 (3) | C2—C1—C14—C15 | 0.0 (3) |
| C2—C1—C6—C7 | −178.75 (17) | C6—C1—C14—C15 | −178.90 (16) |
| C14—C1—C6—C5 | −179.92 (16) | C13—C14—C15—C16 | −64.2 (3) |
| C2—C1—C6—C5 | 1.2 (3) | C1—C14—C15—C16 | 118.4 (2) |
| C5—C6—C7—C8 | 176.94 (17) | C14—C15—C16—C17 | −2.9 (3) |
| C1—C6—C7—C8 | −3.1 (3) | C15—C16—C17—O1 | −21.8 (3) |
| C6—C7—C8—C9 | −177.26 (17) | C15—C16—C17—C18 | 160.02 (19) |
| C6—C7—C8—C13 | 2.3 (3) | O1—C17—C18—C19 | −172.54 (18) |
| C7—C8—C9—C10 | 177.47 (19) | C16—C17—C18—C19 | 5.7 (3) |
| C13—C8—C9—C10 | −2.1 (3) | O1—C17—C18—S1 | 6.9 (2) |
| C8—C9—C10—C11 | 0.2 (3) | C16—C17—C18—S1 | −174.86 (13) |
| C9—C10—C11—C12 | 1.3 (3) | C21—S1—C18—C19 | 0.62 (15) |
| C10—C11—C12—C13 | −0.9 (3) | C21—S1—C18—C17 | −178.93 (15) |
| C11—C12—C13—C14 | −179.56 (18) | C17—C18—C19—C20 | 178.21 (17) |
| C11—C12—C13—C8 | −1.0 (3) | S1—C18—C19—C20 | −1.30 (19) |
| C7—C8—C13—C14 | 1.5 (3) | C18—C19—C20—C21 | 1.5 (2) |
| C9—C8—C13—C14 | −178.92 (17) | C19—C20—C21—S1 | −1.1 (2) |
| C7—C8—C13—C12 | −177.10 (17) | C18—S1—C21—C20 | 0.27 (15) |
| H··· | ||||
| C5—H5A···Cg1i | 0.91 (3) | 2.64 (3) | 3.443 (2) | 149 (2) |
| C15—H15A···Cg2ii | 0.95 (2) | 2.74 (2) | 3.565 (2) | 146.4 (17) |
| C21—H21A···Cg3iii | 1.04 (3) | 2.91 (3) | 3.711 (2) | 134.4 (19) |
Hydrogen-bond geometry (Å, °)
Cg 1, Cg 2 and Cg 3 are the centroids of the S1/C18–C21, C1–C6 and C8–C13 rings, respectively.
| H⋯ | ||||
|---|---|---|---|---|
| C5—H5 | 0.91 (3) | 2.64 (3) | 3.443 (2) | 149 (2) |
| C15—H15 | 0.95 (2) | 2.74 (2) | 3.565 (2) | 146.4 (17) |
| C21—H21 | 1.04 (3) | 2.91 (3) | 3.711 (2) | 134.4 (19) |
Symmetry codes: (i) ; (ii) ; (iii) .