Literature DB >> 21588228

Guanidinium phenyl-arsonate-guanidine-water (1/1/2).

Graham Smith1, Urs D Wermuth.   

Abstract

In the structure of the title compound, CH(6)N(3) (+)·C(6)H(6)AsO(3) (-)·CH(5)N(3)·2H(2)O, the phenyl-arsonate anion participates in two R(2) (2)(8) cyclic hydrogen-bonding inter-actions, one with a guanidinium cation, the other with a guanidine mol-ecule. The anions are also bridged by the water mol-ecules, one of which completes a cyclic R(5) (3)(9) hydrogen-bonding association with the guanidinum cation, conjoint with one of the three R(2) (2)(8) associations about that ion, as well as forming an R(2) (1)(6) cyclic association with the guanidine mol-ecule. The result is a three-dimensional framework structure.

Entities:  

Year:  2010        PMID: 21588228      PMCID: PMC3007548          DOI: 10.1107/S1600536810025043

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For chemical data on phenyl­arsonic acid, see: O’Neil (2001 ▶). For related guanidinium structures, see: Smith et al. (2001 ▶); Smith & Wermuth (2010 ▶); Sun et al. (2002 ▶); Swift & Ward (1998 ▶); Swift et al. (1998 ▶); Mak & Xue (2000 ▶). For graph-set analysis, see: Etter et al. (1990 ▶).

Experimental

Crystal data

CH6N3C6H6AsO3 −·CH5N3·2H2O M = 356.23 Monoclinic, a = 18.6545 (14) Å b = 7.6394 (3) Å c = 12.6319 (10) Å β = 121.856 (10)° V = 1529.0 (2) Å3 Z = 4 Mo Kα radiation μ = 2.25 mm−1 T = 200 K 0.27 × 0.25 × 0.20 mm

Data collection

Oxford Diffraction Gemini-S CCD-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.935, T max = 0.985 4919 measured reflections 2095 independent reflections 1940 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.019 wR(F 2) = 0.035 S = 0.96 2095 reflections 245 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.17 e Å−3 Δρmin = −0.22 e Å−3 Absolute structure: Flack (1983 ▶), 590 Friedel pairs Flack parameter: 0.020 (7) Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶) within WinGX (Farrugia, 1999 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810025043/tk2684sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810025043/tk2684Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
CH6N3+·C6H6AsO3·CH5N3·2H2OF(000) = 736
Mr = 356.23Dx = 1.548 Mg m3
Monoclinic, CcMelting point: 505 K
Hall symbol: C -2ycMo Kα radiation, λ = 0.71073 Å
a = 18.6545 (14) ÅCell parameters from 3772 reflections
b = 7.6394 (3) Åθ = 3.1–28.7°
c = 12.6319 (10) ŵ = 2.25 mm1
β = 121.856 (10)°T = 200 K
V = 1529.0 (2) Å3Block, colourless
Z = 40.27 × 0.25 × 0.20 mm
Oxford Diffraction Gemini-S CCD-detector diffractometer2095 independent reflections
Radiation source: Enhance (Mo) X-ray source1940 reflections with I > 2σ(I)
graphiteRint = 0.024
Detector resolution: 16.08 pixels mm-1θmax = 26.0°, θmin = 3.1°
ω scansh = −22→21
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)k = −9→9
Tmin = 0.935, Tmax = 0.985l = −11→15
4919 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.019H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.035w = 1/[σ2(Fo2) + (0.0159P)2] where P = (Fo2 + 2Fc2)/3
S = 0.96(Δ/σ)max = 0.002
2095 reflectionsΔρmax = 0.17 e Å3
245 parametersΔρmin = −0.22 e Å3
2 restraintsAbsolute structure: Flack (1983), 590 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.020 (7)
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
As10.85472 (1)0.69726 (3)0.45636 (2)0.0162 (1)
O10.85598 (11)0.8928 (2)0.39683 (17)0.0220 (6)
O20.79876 (11)0.5495 (2)0.34181 (17)0.0223 (6)
O30.81253 (10)0.7081 (2)0.54592 (15)0.0209 (6)
C10.96902 (16)0.6103 (3)0.5496 (2)0.0214 (8)
C21.00375 (19)0.5330 (4)0.6658 (3)0.0312 (10)
C31.0834 (2)0.4638 (5)0.7248 (4)0.0393 (12)
C41.1311 (2)0.4729 (5)0.6705 (3)0.0388 (11)
C51.0978 (2)0.5496 (5)0.5556 (4)0.0423 (16)
C61.0164 (2)0.6166 (5)0.4950 (3)0.0326 (11)
N1A0.81112 (15)1.0554 (3)0.6380 (3)0.0214 (8)
N2A0.79667 (18)1.3549 (4)0.6207 (3)0.0253 (9)
N3A0.80233 (15)1.1956 (4)0.4697 (2)0.0259 (8)
C1A0.80313 (16)1.2018 (4)0.5759 (2)0.0185 (8)
N1B0.50840 (19)0.4864 (5)0.2386 (4)0.0452 (11)
N2B0.6296 (2)0.6056 (4)0.4032 (3)0.0391 (12)
N3B0.6265 (2)0.5171 (5)0.2284 (4)0.0391 (11)
C1B0.5899 (2)0.5383 (4)0.2899 (4)0.0301 (11)
O1W0.88312 (19)0.7021 (3)0.7987 (2)0.0416 (10)
O2W0.99736 (15)0.9183 (4)0.9723 (2)0.0421 (8)
H20.972700.528000.704100.0370*
H31.105600.410200.802000.0470*
H41.185600.427200.711700.0470*
H51.129600.556700.518600.0510*
H60.993500.666500.416400.0390*
H210.737 (3)0.538 (7)0.301 (4)0.042 (11)*
H11A0.8076 (16)0.956 (4)0.606 (3)0.036 (8)*
H12A0.823 (2)1.061 (4)0.717 (3)0.043 (10)*
H21A0.7921 (16)1.368 (4)0.680 (3)0.038 (7)*
H22A0.7998 (16)1.461 (4)0.585 (3)0.045 (8)*
H31A0.8017 (17)1.287 (4)0.436 (3)0.035 (8)*
H32A0.8159 (13)1.093 (3)0.441 (2)0.037 (6)*
H11B0.486 (2)0.501 (5)0.285 (3)0.048 (11)*
H12B0.480 (2)0.444 (5)0.166 (4)0.052 (12)*
H21B0.599 (2)0.613 (5)0.437 (4)0.053 (12)*
H22B0.683 (2)0.653 (4)0.436 (3)0.055 (9)*
H31B0.5958 (18)0.495 (4)0.156 (3)0.050 (9)*
H11W0.8672 (19)0.702 (4)0.714 (3)0.052 (9)*
H12W0.859 (2)0.610 (4)0.809 (3)0.046 (10)*
H21W0.960 (2)0.982 (5)0.954 (3)0.046 (12)*
H22W0.973 (2)0.830 (5)0.950 (4)0.048 (12)*
U11U22U33U12U13U23
As10.0201 (1)0.0152 (1)0.0153 (1)−0.0004 (2)0.0107 (1)−0.0003 (2)
O10.0286 (10)0.0189 (10)0.0231 (11)−0.0003 (8)0.0167 (9)0.0020 (8)
O20.0206 (10)0.0247 (10)0.0215 (11)−0.0028 (8)0.0111 (8)−0.0049 (8)
O30.0278 (10)0.0226 (9)0.0174 (10)0.0002 (8)0.0155 (8)−0.0031 (8)
C10.0212 (14)0.0191 (13)0.0205 (15)−0.0008 (11)0.0087 (12)−0.0026 (12)
C20.0302 (17)0.0396 (18)0.0248 (17)0.0038 (14)0.0153 (14)0.0063 (14)
C30.034 (2)0.051 (2)0.027 (2)0.0097 (18)0.0121 (17)0.0101 (18)
C40.0249 (19)0.051 (2)0.033 (2)0.0132 (17)0.0101 (15)0.0051 (18)
C50.026 (2)0.070 (3)0.039 (3)0.0116 (19)0.0226 (19)0.013 (2)
C60.0287 (19)0.0407 (19)0.0261 (18)0.0037 (15)0.0130 (14)0.0105 (16)
N1A0.0329 (14)0.0147 (12)0.0211 (14)0.0015 (10)0.0174 (12)0.0009 (11)
N2A0.0425 (18)0.0191 (15)0.0245 (16)0.0001 (12)0.0246 (14)−0.0022 (12)
N3A0.0440 (15)0.0198 (12)0.0223 (13)0.0015 (12)0.0233 (11)0.0028 (12)
C1A0.0165 (13)0.0203 (14)0.0167 (14)−0.0022 (12)0.0075 (11)−0.0028 (13)
N1B0.0262 (17)0.061 (2)0.046 (2)−0.0091 (14)0.0175 (16)−0.0030 (17)
N2B0.027 (2)0.054 (2)0.032 (2)−0.0023 (15)0.0127 (16)0.0048 (15)
N3B0.0340 (19)0.049 (2)0.031 (2)−0.0045 (16)0.0150 (17)−0.0104 (17)
C1B0.0252 (19)0.027 (2)0.034 (2)−0.0006 (15)0.0128 (19)0.0063 (18)
O1W0.068 (2)0.0355 (17)0.0222 (14)−0.0275 (14)0.0245 (14)−0.0064 (13)
O2W0.0281 (13)0.0333 (14)0.0532 (16)0.0002 (12)0.0134 (12)−0.0182 (13)
As1—O11.6781 (17)N2B—C1B1.320 (5)
As1—O21.6921 (17)N3B—C1B1.287 (6)
As1—O31.687 (2)N1B—H11B0.89 (4)
As1—C11.930 (3)N1B—H12B0.85 (4)
O2—H210.99 (6)N2B—H21B0.88 (5)
O1W—H11W0.95 (3)N2B—H22B0.93 (4)
O1W—H12W0.88 (3)N3B—H31B0.80 (3)
O2W—H21W0.78 (4)C1—C21.385 (4)
O2W—H22W0.78 (4)C1—C61.379 (5)
N1A—C1A1.329 (4)C2—C31.369 (6)
N2A—C1A1.332 (4)C3—C41.383 (6)
N3A—C1A1.335 (3)C4—C51.373 (5)
N1A—H12A0.90 (3)C5—C61.388 (6)
N1A—H11A0.85 (3)C2—H20.9300
N2A—H21A0.80 (3)C3—H30.9300
N2A—H22A0.94 (3)C4—H40.9300
N3A—H31A0.82 (3)C5—H50.9300
N3A—H32A0.95 (2)C6—H60.9300
N1B—C1B1.360 (6)
As1···H11A3.16 (3)As1···H32A3.09 (2)
As1···H11W3.14 (3)As1···H12Wii3.02 (3)
As1···H22Ai2.95 (3)As1···H21Aiii3.08 (3)
As1···H22B3.09 (4)As1···H21Wiii3.15 (4)
O1—As1—O2111.03 (9)As1—C1—C6118.4 (2)
O1—As1—O3112.25 (9)C2—C1—C6118.7 (3)
O1—As1—C1107.92 (11)As1—C1—C2122.8 (3)
O2—As1—O3108.09 (10)C1—C2—C3120.5 (4)
O2—As1—C1106.05 (10)C2—C3—C4120.6 (4)
O3—As1—C1111.34 (10)C3—C4—C5119.7 (4)
As1—O2—H21122 (3)C4—C5—C6119.6 (4)
H11W—O1W—H12W107 (3)C1—C6—C5121.0 (3)
H21W—O2W—H22W100 (4)C3—C2—H2120.00
H11A—N1A—H12A119 (3)C1—C2—H2120.00
C1A—N1A—H11A121 (2)C2—C3—H3120.00
C1A—N1A—H12A120 (2)C4—C3—H3120.00
H21A—N2A—H22A114 (3)C5—C4—H4120.00
C1A—N2A—H21A126 (2)C3—C4—H4120.00
C1A—N2A—H22A121 (2)C6—C5—H5120.00
H31A—N3A—H32A116 (3)C4—C5—H5120.00
C1A—N3A—H32A123.2 (14)C5—C6—H6119.00
C1A—N3A—H31A119 (2)C1—C6—H6120.00
C1B—N1B—H11B117 (2)N2A—C1A—N3A120.2 (3)
H11B—N1B—H12B121 (4)N1A—C1A—N2A119.7 (3)
C1B—N1B—H12B122 (3)N1A—C1A—N3A120.1 (3)
C1B—N2B—H22B120 (2)N2B—C1B—N3B122.1 (4)
C1B—N2B—H21B115 (3)N1B—C1B—N2B118.5 (4)
H21B—N2B—H22B125 (4)N1B—C1B—N3B119.5 (4)
C1B—N3B—H31B115 (3)
O1—As1—C1—C2136.3 (2)C6—C1—C2—C3−0.2 (5)
O1—As1—C1—C6−47.5 (2)As1—C1—C6—C5−177.4 (3)
O2—As1—C1—C2−104.7 (2)C2—C1—C6—C5−1.0 (5)
O2—As1—C1—C671.6 (2)C1—C2—C3—C41.3 (5)
O3—As1—C1—C212.7 (2)C2—C3—C4—C5−1.0 (6)
O3—As1—C1—C6−171.1 (2)C3—C4—C5—C6−0.3 (6)
As1—C1—C2—C3176.0 (3)C4—C5—C6—C11.3 (6)
D—H···AD—HH···AD···AD—H···A
O2—H21···N3B0.99 (6)1.77 (6)2.753 (5)180 (6)
N1A—H11A···O30.85 (3)2.06 (3)2.903 (3)173 (3)
N1A—H12A···O1iv0.90 (3)2.05 (3)2.943 (4)172 (3)
N2A—H21A···O2iv0.80 (3)2.08 (3)2.867 (4)167 (3)
N2A—H22A···O3v0.94 (3)2.00 (3)2.925 (4)167 (3)
N3A—H31A···O2v0.82 (3)2.32 (3)3.132 (3)179 (5)
N3A—H32A···O10.95 (2)1.91 (2)2.859 (4)174 (2)
N1B—H11B···O2Wvi0.89 (4)2.34 (3)3.151 (5)151 (3)
N2B—H21B···O2Wvi0.88 (5)2.18 (5)3.026 (5)163 (4)
N2B—H22B···O30.93 (4)2.10 (4)3.002 (4)165 (3)
N3B—H31B···O2Wvii0.80 (3)2.15 (3)2.935 (5)169 (4)
O1W—H11W···O30.95 (3)1.81 (3)2.737 (3)167 (4)
O1W—H12W···O2viii0.88 (3)1.85 (4)2.715 (4)168 (4)
O2W—H21W···O1iv0.78 (4)1.93 (4)2.701 (4)171 (4)
O2W—H22W···O1W0.78 (4)2.01 (4)2.673 (4)143 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H21⋯N3B0.99 (6)1.77 (6)2.753 (5)180 (6)
N1A—H11A⋯O30.85 (3)2.06 (3)2.903 (3)173 (3)
N1A—H12A⋯O1i0.90 (3)2.05 (3)2.943 (4)172 (3)
N2A—H21A⋯O2i0.80 (3)2.08 (3)2.867 (4)167 (3)
N2A—H22A⋯O3ii0.94 (3)2.00 (3)2.925 (4)167 (3)
N3A—H31A⋯O2ii0.82 (3)2.32 (3)3.132 (3)179 (5)
N3A—H32A⋯O10.95 (2)1.91 (2)2.859 (4)174 (2)
N1B—H11B⋯O2Wiii0.89 (4)2.34 (3)3.151 (5)151 (3)
N2B—H21B⋯O2Wiii0.88 (5)2.18 (5)3.026 (5)163 (4)
N2B—H22B⋯O30.93 (4)2.10 (4)3.002 (4)165 (3)
N3B—H31B⋯O2Wiv0.80 (3)2.15 (3)2.935 (5)169 (4)
O1W—H11W⋯O30.95 (3)1.81 (3)2.737 (3)167 (4)
O1W—H12W⋯O2v0.88 (3)1.85 (4)2.715 (4)168 (4)
O2W—H21W⋯O1i0.78 (4)1.93 (4)2.701 (4)171 (4)
O2W—H22W⋯O1W0.78 (4)2.01 (4)2.673 (4)143 (4)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-07

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